EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000022171 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171927
Alias: -
Full Name: zgc:171927
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 6671 bases
Position: chr9:38632885-38639555
Accession: ZDB-GENE-070822-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000031419	MMR_HSR1	PF01926.23	0.00014	1	1
ENSAPEP00000031547	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000032380	-	654	-	ENSAPEP00000031547	217 (aa)	-	-
ENSAPET00000032387	-	558	-	ENSAPEP00000031554	185 (aa)	-	-
ENSAPET00000032393	-	549	-	ENSAPEP00000031560	182 (aa)	-	-
ENSAPET00000032251	-	621	-	ENSAPEP00000031419	206 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000022171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000022171	zgc:171927	77	49.689	ENSAPEG00000022923	rab18b	79	50.000
ENSAPEG00000022171	zgc:171927	95	38.498	ENSAPEG00000015376	rab33a	89	38.498
ENSAPEG00000022171	zgc:171927	78	43.558	ENSAPEG00000017868	-	91	40.500
ENSAPEG00000022171	zgc:171927	85	56.742	ENSAPEG00000004121	-	89	56.742
ENSAPEG00000022171	zgc:171927	93	41.294	ENSAPEG00000022217	-	93	41.294
ENSAPEG00000022171	zgc:171927	79	39.645	ENSAPEG00000017200	RAB7A	82	39.645
ENSAPEG00000022171	zgc:171927	97	45.024	ENSAPEG00000009177	rab11ba	96	45.024
ENSAPEG00000022171	zgc:171927	97	42.857	ENSAPEG00000022106	rab25b	97	42.029
ENSAPEG00000022171	zgc:171927	99	73.301	ENSAPEG00000012105	rab1ba	99	73.301
ENSAPEG00000022171	zgc:171927	78	64.815	ENSAPEG00000001130	rab35b	80	65.432
ENSAPEG00000022171	zgc:171927	62	45.255	ENSAPEG00000015430	-	96	46.847
ENSAPEG00000022171	zgc:171927	74	37.736	ENSAPEG00000024142	rab9a	77	37.736
ENSAPEG00000022171	zgc:171927	97	41.429	ENSAPEG00000013500	rab25a	96	41.429
ENSAPEG00000022171	zgc:171927	82	33.333	ENSAPEG00000018205	si:cabz01085950.1	88	33.333
ENSAPEG00000022171	zgc:171927	59	30.827	ENSAPEG00000003601	arfrp1	65	30.827
ENSAPEG00000022171	zgc:171927	97	45.622	ENSAPEG00000022135	rab11al	96	45.622
ENSAPEG00000022171	zgc:171927	79	39.645	ENSAPEG00000000306	RAB7A	82	39.645
ENSAPEG00000022171	zgc:171927	81	32.941	ENSAPEG00000001800	-	92	32.941
ENSAPEG00000022171	zgc:171927	81	33.918	ENSAPEG00000008940	si:ch73-116o1.2	88	33.333
ENSAPEG00000022171	zgc:171927	76	40.373	ENSAPEG00000018607	rab34b	58	40.373
ENSAPEG00000022171	zgc:171927	86	80.769	ENSAPEG00000001358	rab1ab	90	81.319
ENSAPEG00000022171	zgc:171927	86	32.597	ENSAPEG00000023408	rheb	93	32.597
ENSAPEG00000022171	zgc:171927	75	34.591	ENSAPEG00000002251	rras	82	33.951
ENSAPEG00000022171	zgc:171927	82	46.512	ENSAPEG00000013255	rab12	74	45.304
ENSAPEG00000022171	zgc:171927	56	31.148	ENSAPEG00000002838	-	63	31.148
ENSAPEG00000022171	zgc:171927	57	31.356	ENSAPEG00000023154	arl8a	61	31.356
ENSAPEG00000022171	zgc:171927	74	38.365	ENSAPEG00000015652	-	74	38.365
ENSAPEG00000022171	zgc:171927	88	41.379	ENSAPEG00000014246	rab14	94	41.379
ENSAPEG00000022171	zgc:171927	77	38.012	ENSAPEG00000005857	-	88	38.012
ENSAPEG00000022171	zgc:171927	97	44.811	ENSAPEG00000016590	rab11bb	96	44.811
ENSAPEG00000022171	zgc:171927	77	39.130	ENSAPEG00000007731	rab6bb	77	39.130
ENSAPEG00000022171	zgc:171927	98	41.935	ENSAPEG00000005176	zgc:101559	87	41.935
ENSAPEG00000022171	zgc:171927	98	42.593	ENSAPEG00000001822	-	100	42.593
ENSAPEG00000022171	zgc:171927	76	39.130	ENSAPEG00000023338	si:dkey-13a21.4	73	39.506
ENSAPEG00000022171	zgc:171927	58	35.537	ENSAPEG00000001372	RAP2B	94	36.090
ENSAPEG00000022171	zgc:171927	79	41.212	ENSAPEG00000011209	rab22a	83	41.212
ENSAPEG00000022171	zgc:171927	81	50.296	ENSAPEG00000007912	rab15	79	50.296
ENSAPEG00000022171	zgc:171927	96	36.150	ENSAPEG00000014149	rab9b	98	36.150
ENSAPEG00000022171	zgc:171927	77	51.852	ENSAPEG00000005392	rab18a	79	51.852
ENSAPEG00000022171	zgc:171927	76	39.130	ENSAPEG00000010503	rab34a	61	39.130
ENSAPEG00000022171	zgc:171927	78	37.037	ENSAPEG00000007675	kras	91	36.994
ENSAPEG00000022171	zgc:171927	99	74.272	ENSAPEG00000022488	-	99	74.272
ENSAPEG00000022171	zgc:171927	94	35.096	ENSAPEG00000011251	rab36	78	35.096
ENSAPEG00000022171	zgc:171927	97	44.037	ENSAPEG00000010294	rab2a	99	44.037
ENSAPEG00000022171	zgc:171927	92	50.000	ENSAPEG00000000075	rab11a	89	50.000
ENSAPEG00000022171	zgc:171927	82	37.209	ENSAPEG00000002915	RAB17	75	37.791
ENSAPEG00000022171	zgc:171927	83	43.678	ENSAPEG00000013376	rab5aa	81	44.253
ENSAPEG00000022171	zgc:171927	77	62.500	ENSAPEG00000006500	si:dkey-16l2.16	77	62.112
ENSAPEG00000022171	zgc:171927	81	43.860	ENSAPEG00000016172	-	80	43.860
ENSAPEG00000022171	zgc:171927	72	31.579	ENSAPEG00000008980	rras2	81	32.927
ENSAPEG00000022171	zgc:171927	90	43.386	ENSAPEG00000007713	rab42a	72	43.158
ENSAPEG00000022171	zgc:171927	78	34.969	ENSAPEG00000009546	hrasb	86	35.976
ENSAPEG00000022171	zgc:171927	81	44.444	ENSAPEG00000017138	RAB39B	80	44.444
ENSAPEG00000022171	zgc:171927	95	36.318	ENSAPEG00000007931	RAB41	91	36.318
ENSAPEG00000022171	zgc:171927	81	41.209	ENSAPEG00000005001	rab33ba	79	41.209
ENSAPEG00000022171	zgc:171927	80	53.012	ENSAPEG00000012044	rab30	82	53.012
ENSAPEG00000022171	zgc:171927	80	38.150	ENSAPEG00000020892	rab6ba	87	38.150
ENSAPEG00000022171	zgc:171927	77	35.443	ENSAPEG00000003164	rabl2	70	35.443
ENSAPEG00000022171	zgc:171927	78	33.129	ENSAPEG00000016212	rhebl1	88	33.129
ENSAPEG00000022171	zgc:171927	86	36.111	ENSAPEG00000019758	rab23	97	34.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022171	zgc:171927	99	97.196	ENSAPOG00000004980	-	100	97.196	Acanthochromis_polyacanthus
ENSAPEG00000022171	zgc:171927	99	93.925	ENSACIG00000009006	zgc:171927	100	93.925	Amphilophus_citrinellus
ENSAPEG00000022171	zgc:171927	66	97.778	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSAPEG00000022171	zgc:171927	99	98.598	ENSAOCG00000024149	-	100	98.598	Amphiprion_ocellaris
ENSAPEG00000022171	zgc:171927	99	93.925	ENSATEG00000003430	zgc:171927	100	93.925	Anabas_testudineus
ENSAPEG00000022171	zgc:171927	99	92.523	ENSACLG00000013734	-	100	92.523	Astatotilapia_calliptera
ENSAPEG00000022171	zgc:171927	99	79.535	ENSAMXG00000039486	zgc:171927	100	79.535	Astyanax_mexicanus
ENSAPEG00000022171	zgc:171927	99	89.720	ENSCSEG00000014416	zgc:171927	100	89.720	Cynoglossus_semilaevis
ENSAPEG00000022171	zgc:171927	99	92.056	ENSCVAG00000009222	zgc:171927	100	92.056	Cyprinodon_variegatus
ENSAPEG00000022171	zgc:171927	99	77.674	ENSDARG00000033056	zgc:171927	100	77.674	Danio_rerio
ENSAPEG00000022171	zgc:171927	96	81.500	ENSELUG00000011680	zgc:171927	99	78.605	Esox_lucius
ENSAPEG00000022171	zgc:171927	99	92.056	ENSFHEG00000022176	zgc:171927	100	92.056	Fundulus_heteroclitus
ENSAPEG00000022171	zgc:171927	94	82.051	ENSGMOG00000004979	-	97	79.147	Gadus_morhua
ENSAPEG00000022171	zgc:171927	96	90.909	ENSGAFG00000015702	zgc:171927	84	90.909	Gambusia_affinis
ENSAPEG00000022171	zgc:171927	99	92.056	ENSGACG00000013401	zgc:171927	99	92.056	Gasterosteus_aculeatus
ENSAPEG00000022171	zgc:171927	99	92.523	ENSHBUG00000002397	-	100	92.523	Haplochromis_burtoni
ENSAPEG00000022171	zgc:171927	99	92.056	ENSKMAG00000009856	zgc:171927	100	92.056	Kryptolebias_marmoratus
ENSAPEG00000022171	zgc:171927	96	90.431	ENSLBEG00000027226	-	93	87.558	Labrus_bergylta
ENSAPEG00000022171	zgc:171927	99	91.121	ENSLBEG00000005791	-	100	91.121	Labrus_bergylta
ENSAPEG00000022171	zgc:171927	96	71.905	ENSLOCG00000014692	zgc:171927	96	71.905	Lepisosteus_oculatus
ENSAPEG00000022171	zgc:171927	99	91.121	ENSMAMG00000020135	zgc:171927	100	91.121	Mastacembelus_armatus
ENSAPEG00000022171	zgc:171927	99	92.523	ENSMZEG00005024685	-	100	92.523	Maylandia_zebra
ENSAPEG00000022171	zgc:171927	99	87.850	ENSMMOG00000009833	-	100	87.850	Mola_mola
ENSAPEG00000022171	zgc:171927	99	91.121	ENSMALG00000021129	zgc:171927	100	91.121	Monopterus_albus
ENSAPEG00000022171	zgc:171927	99	92.056	ENSNBRG00000006202	zgc:171927	100	92.056	Neolamprologus_brichardi
ENSAPEG00000022171	zgc:171927	99	91.589	ENSORLG00000000602	zgc:171927	100	91.589	Oryzias_latipes
ENSAPEG00000022171	zgc:171927	99	91.589	ENSORLG00020021071	zgc:171927	100	91.589	Oryzias_latipes_hni
ENSAPEG00000022171	zgc:171927	99	91.589	ENSORLG00015010098	zgc:171927	100	91.589	Oryzias_latipes_hsok
ENSAPEG00000022171	zgc:171927	99	92.056	ENSOMEG00000020594	zgc:171927	100	92.056	Oryzias_melastigma
ENSAPEG00000022171	zgc:171927	99	92.056	ENSPFOG00000013810	zgc:171927	99	92.056	Poecilia_formosa
ENSAPEG00000022171	zgc:171927	99	91.121	ENSPLAG00000005869	zgc:171927	100	91.121	Poecilia_latipinna
ENSAPEG00000022171	zgc:171927	99	92.056	ENSPMEG00000022350	zgc:171927	100	92.056	Poecilia_mexicana
ENSAPEG00000022171	zgc:171927	99	92.056	ENSPREG00000017517	zgc:171927	100	92.056	Poecilia_reticulata
ENSAPEG00000022171	zgc:171927	99	92.523	ENSPNYG00000007520	-	100	92.523	Pundamilia_nyererei
ENSAPEG00000022171	zgc:171927	99	79.535	ENSPNAG00000029574	zgc:171927	100	79.535	Pygocentrus_nattereri
ENSAPEG00000022171	zgc:171927	99	77.209	ENSSFOG00015005464	zgc:171927	99	77.209	Scleropages_formosus
ENSAPEG00000022171	zgc:171927	99	88.785	ENSSMAG00000004416	-	100	88.785	Scophthalmus_maximus
ENSAPEG00000022171	zgc:171927	99	94.393	ENSSDUG00000004445	zgc:171927	100	94.393	Seriola_dumerili
ENSAPEG00000022171	zgc:171927	99	94.393	ENSSLDG00000018024	zgc:171927	100	94.393	Seriola_lalandi_dorsalis
ENSAPEG00000022171	zgc:171927	99	97.196	ENSSPAG00000013533	zgc:171927	100	97.196	Stegastes_partitus
ENSAPEG00000022171	zgc:171927	99	92.523	ENSXCOG00000010695	zgc:171927	100	92.523	Xiphophorus_couchianus
ENSAPEG00000022171	zgc:171927	99	92.523	ENSXMAG00000004683	zgc:171927	100	92.523	Xiphophorus_maculatus