EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000022246 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 74749 bases
Position: chr15:33221839-33296587
Accession: ZDB-GENE-030131-5386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000031398	La	PF05383.17	9e-21	1	1
ENSAPEP00000031439	La	PF05383.17	1e-20	1	1
ENSAPEP00000031420	La	PF05383.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000032252	-	7211	-	ENSAPEP00000031420	1056 (aa)	-	-
ENSAPET00000032230	-	7283	-	ENSAPEP00000031398	1080 (aa)	-	-
ENSAPET00000032271	-	3063	-	ENSAPEP00000031439	1020 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000022246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000022246	larp1	96	52.500	ENSAPEG00000004126	larp1b	92	53.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022246	larp1	86	69.133	ENSG00000155506	LARP1	90	80.606	Homo_sapiens
ENSAPEG00000022246	larp1	90	97.235	ENSAPOG00000020685	larp1	99	98.618	Acanthochromis_polyacanthus
ENSAPEG00000022246	larp1	85	70.427	ENSAMEG00000016673	LARP1	97	69.118	Ailuropoda_melanoleuca
ENSAPEG00000022246	larp1	100	80.952	ENSACIG00000012994	larp1	100	80.952	Amphilophus_citrinellus
ENSAPEG00000022246	larp1	79	99.287	ENSAOCG00000007792	larp1	100	99.287	Amphiprion_ocellaris
ENSAPEG00000022246	larp1	98	90.205	ENSATEG00000013523	larp1	100	89.767	Anabas_testudineus
ENSAPEG00000022246	larp1	83	72.228	ENSAPLG00000007559	LARP1	98	74.335	Anas_platyrhynchos
ENSAPEG00000022246	larp1	89	69.632	ENSACAG00000004071	LARP1	97	73.963	Anolis_carolinensis
ENSAPEG00000022246	larp1	87	67.699	ENSANAG00000029949	LARP1	97	66.143	Aotus_nancymaae
ENSAPEG00000022246	larp1	100	90.485	ENSACLG00000015256	larp1	99	93.075	Astatotilapia_calliptera
ENSAPEG00000022246	larp1	97	77.683	ENSAMXG00000000859	larp1	98	78.211	Astyanax_mexicanus
ENSAPEG00000022246	larp1	97	64.641	ENSBTAG00000008443	LARP1	98	64.396	Bos_taurus
ENSAPEG00000022246	larp1	97	64.318	ENSCJAG00000004454	LARP1	98	64.658	Callithrix_jacchus
ENSAPEG00000022246	larp1	85	70.318	ENSCAFG00000017639	LARP1	97	69.013	Canis_familiaris
ENSAPEG00000022246	larp1	81	72.274	ENSCAFG00020023860	LARP1	96	71.940	Canis_lupus_dingo
ENSAPEG00000022246	larp1	97	65.136	ENSCHIG00000014414	LARP1	99	63.047	Capra_hircus
ENSAPEG00000022246	larp1	87	69.336	ENSTSYG00000013732	LARP1	97	66.667	Carlito_syrichta
ENSAPEG00000022246	larp1	78	70.264	ENSCAPG00000013865	LARP1	85	70.144	Cavia_aperea
ENSAPEG00000022246	larp1	86	69.450	ENSCPOG00000003377	LARP1	97	69.053	Cavia_porcellus
ENSAPEG00000022246	larp1	97	64.135	ENSCCAG00000025201	LARP1	98	64.475	Cebus_capucinus
ENSAPEG00000022246	larp1	97	62.396	ENSCATG00000030675	LARP1	98	62.249	Cercocebus_atys
ENSAPEG00000022246	larp1	87	68.940	ENSCLAG00000012755	LARP1	97	67.087	Chinchilla_lanigera
ENSAPEG00000022246	larp1	80	69.637	ENSCSAG00000010800	LARP1	98	67.673	Chlorocebus_sabaeus
ENSAPEG00000022246	larp1	83	66.373	ENSCHOG00000012716	LARP1	89	67.169	Choloepus_hoffmanni
ENSAPEG00000022246	larp1	89	74.381	ENSCPBG00000002173	LARP1	92	72.766	Chrysemys_picta_bellii
ENSAPEG00000022246	larp1	86	69.681	ENSCANG00000037418	LARP1	91	68.947	Colobus_angolensis_palliatus
ENSAPEG00000022246	larp1	98	64.820	ENSCGRG00001016913	Larp1	98	65.088	Cricetulus_griseus_chok1gshd
ENSAPEG00000022246	larp1	86	64.979	ENSCGRG00000009916	Larp1	99	65.951	Cricetulus_griseus_crigri
ENSAPEG00000022246	larp1	100	88.609	ENSCSEG00000016431	larp1	100	89.405	Cynoglossus_semilaevis
ENSAPEG00000022246	larp1	98	88.761	ENSCVAG00000022687	larp1	100	88.693	Cyprinodon_variegatus
ENSAPEG00000022246	larp1	98	70.849	ENSDARG00000101722	larp1	98	70.849	Danio_rerio
ENSAPEG00000022246	larp1	99	63.891	ENSDNOG00000012073	LARP1	98	63.891	Dasypus_novemcinctus
ENSAPEG00000022246	larp1	86	65.608	ENSDORG00000002897	Larp1	95	66.243	Dipodomys_ordii
ENSAPEG00000022246	larp1	82	69.956	ENSETEG00000020251	LARP1	99	70.447	Echinops_telfairi
ENSAPEG00000022246	larp1	97	64.299	ENSEASG00005001070	LARP1	98	64.331	Equus_asinus_asinus
ENSAPEG00000022246	larp1	97	64.299	ENSECAG00000017002	LARP1	78	64.929	Equus_caballus
ENSAPEG00000022246	larp1	84	66.740	ENSEEUG00000001065	LARP1	98	66.558	Erinaceus_europaeus
ENSAPEG00000022246	larp1	99	78.802	ENSELUG00000019403	larp1	99	80.019	Esox_lucius
ENSAPEG00000022246	larp1	97	64.018	ENSFCAG00000000592	LARP1	98	64.513	Felis_catus
ENSAPEG00000022246	larp1	78	76.074	ENSFALG00000008335	LARP1	99	74.356	Ficedula_albicollis
ENSAPEG00000022246	larp1	86	69.787	ENSFDAG00000021125	LARP1	99	68.323	Fukomys_damarensis
ENSAPEG00000022246	larp1	63	81.168	ENSFHEG00000020307	larp1	97	80.876	Fundulus_heteroclitus
ENSAPEG00000022246	larp1	99	68.451	ENSGALG00000040109	LARP1	99	68.929	Gallus_gallus
ENSAPEG00000022246	larp1	97	70.388	ENSGAGG00000025113	LARP1	96	76.092	Gopherus_agassizii
ENSAPEG00000022246	larp1	88	68.295	ENSGGOG00000006048	LARP1	92	68.012	Gorilla_gorilla
ENSAPEG00000022246	larp1	100	90.893	ENSHBUG00000020762	larp1	99	93.449	Haplochromis_burtoni
ENSAPEG00000022246	larp1	99	62.933	ENSHGLG00000006267	LARP1	99	63.861	Heterocephalus_glaber_female
ENSAPEG00000022246	larp1	88	67.378	ENSHGLG00100014230	-	99	68.149	Heterocephalus_glaber_male
ENSAPEG00000022246	larp1	90	58.769	ENSHGLG00100003395	-	89	58.769	Heterocephalus_glaber_male
ENSAPEG00000022246	larp1	92	91.211	ENSHCOG00000010786	larp1	99	92.162	Hippocampus_comes
ENSAPEG00000022246	larp1	98	72.440	ENSIPUG00000019105	Larp1	100	73.397	Ictalurus_punctatus
ENSAPEG00000022246	larp1	86	67.021	ENSSTOG00000005678	LARP1	96	66.491	Ictidomys_tridecemlineatus
ENSAPEG00000022246	larp1	97	61.366	ENSJJAG00000016950	Larp1	98	60.782	Jaculus_jaculus
ENSAPEG00000022246	larp1	100	88.868	ENSKMAG00000018468	larp1	99	91.291	Kryptolebias_marmoratus
ENSAPEG00000022246	larp1	100	87.477	ENSLBEG00000027172	larp1	100	87.568	Labrus_bergylta
ENSAPEG00000022246	larp1	95	78.187	ENSLOCG00000012457	larp1	99	78.287	Lepisosteus_oculatus
ENSAPEG00000022246	larp1	98	64.259	ENSLAFG00000008991	LARP1	98	64.007	Loxodonta_africana
ENSAPEG00000022246	larp1	86	69.362	ENSMFAG00000031651	LARP1	91	68.737	Macaca_fascicularis
ENSAPEG00000022246	larp1	86	66.702	ENSMMUG00000009411	LARP1	97	66.315	Macaca_mulatta
ENSAPEG00000022246	larp1	81	71.709	ENSMNEG00000039294	LARP1	98	70.056	Macaca_nemestrina
ENSAPEG00000022246	larp1	86	69.468	ENSMLEG00000035142	LARP1	91	68.842	Mandrillus_leucophaeus
ENSAPEG00000022246	larp1	100	91.117	ENSMAMG00000021788	larp1	100	91.026	Mastacembelus_armatus
ENSAPEG00000022246	larp1	100	90.485	ENSMZEG00005009345	larp1	99	93.075	Maylandia_zebra
ENSAPEG00000022246	larp1	88	71.354	ENSMGAG00000005696	LARP1	98	71.320	Meleagris_gallopavo
ENSAPEG00000022246	larp1	99	64.247	ENSMAUG00000001385	Larp1	99	64.124	Mesocricetus_auratus
ENSAPEG00000022246	larp1	87	67.432	ENSMICG00000000837	LARP1	98	70.201	Microcebus_murinus
ENSAPEG00000022246	larp1	98	64.844	ENSMOCG00000008920	Larp1	98	65.088	Microtus_ochrogaster
ENSAPEG00000022246	larp1	95	67.505	ENSMMOG00000013364	larp1	99	69.536	Mola_mola
ENSAPEG00000022246	larp1	89	68.891	ENSMODG00000008663	LARP1	99	68.891	Monodelphis_domestica
ENSAPEG00000022246	larp1	100	89.844	ENSMALG00000017180	larp1	100	89.844	Monopterus_albus
ENSAPEG00000022246	larp1	98	65.431	MGP_CAROLIEiJ_G0016383	Larp1	98	65.492	Mus_caroli
ENSAPEG00000022246	larp1	100	64.551	ENSMUSG00000037331	Larp1	99	64.551	Mus_musculus
ENSAPEG00000022246	larp1	98	65.556	MGP_PahariEiJ_G0017518	Larp1	98	65.431	Mus_pahari
ENSAPEG00000022246	larp1	100	64.733	MGP_SPRETEiJ_G0017225	Larp1	99	64.551	Mus_spretus
ENSAPEG00000022246	larp1	82	61.165	ENSMPUG00000013564	LARP1	99	61.746	Mustela_putorius_furo
ENSAPEG00000022246	larp1	87	65.795	ENSMLUG00000002608	LARP1	98	65.900	Myotis_lucifugus
ENSAPEG00000022246	larp1	87	67.167	ENSNGAG00000001098	Larp1	97	66.247	Nannospalax_galili
ENSAPEG00000022246	larp1	92	90.686	ENSNBRG00000008963	larp1	98	90.993	Neolamprologus_brichardi
ENSAPEG00000022246	larp1	86	68.225	ENSNLEG00000016588	LARP1	98	66.175	Nomascus_leucogenys
ENSAPEG00000022246	larp1	89	65.026	ENSMEUG00000002957	LARP1	99	65.026	Notamacropus_eugenii
ENSAPEG00000022246	larp1	89	67.831	ENSOPRG00000013014	LARP1	97	68.737	Ochotona_princeps
ENSAPEG00000022246	larp1	88	67.451	ENSODEG00000010824	LARP1	97	68.737	Octodon_degus
ENSAPEG00000022246	larp1	99	86.842	ENSONIG00000017308	larp1	100	87.296	Oreochromis_niloticus
ENSAPEG00000022246	larp1	91	69.859	ENSOANG00000005096	LARP1	99	70.262	Ornithorhynchus_anatinus
ENSAPEG00000022246	larp1	97	65.088	ENSOCUG00000013066	LARP1	97	65.177	Oryctolagus_cuniculus
ENSAPEG00000022246	larp1	100	86.262	ENSORLG00000000824	larp1	100	86.820	Oryzias_latipes
ENSAPEG00000022246	larp1	100	86.330	ENSORLG00020022241	larp1	100	86.330	Oryzias_latipes_hni
ENSAPEG00000022246	larp1	100	85.258	ENSORLG00015007538	larp1	100	86.479	Oryzias_latipes_hsok
ENSAPEG00000022246	larp1	100	84.789	ENSOMEG00000003134	larp1	100	85.902	Oryzias_melastigma
ENSAPEG00000022246	larp1	86	69.239	ENSOGAG00000016750	LARP1	97	69.027	Otolemur_garnettii
ENSAPEG00000022246	larp1	86	68.051	ENSOARG00000009893	LARP1	99	66.944	Ovis_aries
ENSAPEG00000022246	larp1	86	69.133	ENSPPAG00000042993	LARP1	91	68.842	Pan_paniscus
ENSAPEG00000022246	larp1	85	68.743	ENSPPRG00000009780	LARP1	93	65.964	Panthera_pardus
ENSAPEG00000022246	larp1	85	68.969	ENSPTIG00000007013	LARP1	93	66.491	Panthera_tigris_altaica
ENSAPEG00000022246	larp1	97	61.813	ENSPTRG00000017447	LARP1	98	62.249	Pan_troglodytes
ENSAPEG00000022246	larp1	97	62.396	ENSPANG00000008080	LARP1	98	62.340	Papio_anubis
ENSAPEG00000022246	larp1	98	69.009	ENSPKIG00000017153	-	99	69.912	Paramormyrops_kingsleyae
ENSAPEG00000022246	larp1	99	76.519	ENSPKIG00000010096	larp1	100	77.778	Paramormyrops_kingsleyae
ENSAPEG00000022246	larp1	96	81.998	ENSPMGG00000011599	larp1	98	82.097	Periophthalmus_magnuspinnatus
ENSAPEG00000022246	larp1	89	65.831	ENSPEMG00000022523	Larp1	99	65.128	Peromyscus_maniculatus_bairdii
ENSAPEG00000022246	larp1	97	66.853	ENSPCIG00000019242	LARP1	89	66.914	Phascolarctos_cinereus
ENSAPEG00000022246	larp1	100	84.755	ENSPFOG00000005836	larp1	100	85.027	Poecilia_formosa
ENSAPEG00000022246	larp1	100	85.065	ENSPLAG00000008936	larp1	100	85.436	Poecilia_latipinna
ENSAPEG00000022246	larp1	100	84.483	ENSPMEG00000013656	larp1	100	84.755	Poecilia_mexicana
ENSAPEG00000022246	larp1	89	86.489	ENSPREG00000005726	larp1	99	86.858	Poecilia_reticulata
ENSAPEG00000022246	larp1	85	68.242	ENSPCAG00000006407	LARP1	97	66.949	Procavia_capensis
ENSAPEG00000022246	larp1	86	61.945	ENSPCOG00000016949	LARP1	97	64.421	Propithecus_coquereli
ENSAPEG00000022246	larp1	97	64.051	ENSPVAG00000002262	LARP1	98	64.396	Pteropus_vampyrus
ENSAPEG00000022246	larp1	100	90.664	ENSPNYG00000007938	larp1	99	93.177	Pundamilia_nyererei
ENSAPEG00000022246	larp1	99	76.588	ENSPNAG00000021427	larp1	99	78.199	Pygocentrus_nattereri
ENSAPEG00000022246	larp1	87	66.526	ENSRNOG00000031544	Larp1	96	66.526	Rattus_norvegicus
ENSAPEG00000022246	larp1	86	69.468	ENSRBIG00000038005	LARP1	94	66.100	Rhinopithecus_bieti
ENSAPEG00000022246	larp1	85	70.143	ENSRROG00000034073	LARP1	98	70.168	Rhinopithecus_roxellana
ENSAPEG00000022246	larp1	89	67.548	ENSSBOG00000019816	LARP1	97	66.386	Saimiri_boliviensis_boliviensis
ENSAPEG00000022246	larp1	89	70.010	ENSSHAG00000011115	LARP1	99	70.010	Sarcophilus_harrisii
ENSAPEG00000022246	larp1	99	73.840	ENSSFOG00015018058	-	98	74.112	Scleropages_formosus
ENSAPEG00000022246	larp1	89	78.608	ENSSFOG00015020304	larp1	95	78.348	Scleropages_formosus
ENSAPEG00000022246	larp1	94	86.476	ENSSMAG00000007468	larp1	98	88.351	Scophthalmus_maximus
ENSAPEG00000022246	larp1	100	92.342	ENSSDUG00000000268	larp1	100	92.523	Seriola_dumerili
ENSAPEG00000022246	larp1	84	88.269	ENSSLDG00000016505	larp1	99	88.155	Seriola_lalandi_dorsalis
ENSAPEG00000022246	larp1	58	77.305	ENSSARG00000013907	-	87	78.214	Sorex_araneus
ENSAPEG00000022246	larp1	99	66.575	ENSSPUG00000012179	-	98	66.973	Sphenodon_punctatus
ENSAPEG00000022246	larp1	100	95.027	ENSSPAG00000003910	larp1	100	95.027	Stegastes_partitus
ENSAPEG00000022246	larp1	99	62.857	ENSSSCG00000017069	LARP1	99	69.488	Sus_scrofa
ENSAPEG00000022246	larp1	85	72.193	ENSTGUG00000000704	LARP1	100	72.299	Taeniopygia_guttata
ENSAPEG00000022246	larp1	99	86.096	ENSTRUG00000009470	larp1	99	86.188	Takifugu_rubripes
ENSAPEG00000022246	larp1	83	68.212	ENSTBEG00000003381	LARP1	99	67.991	Tupaia_belangeri
ENSAPEG00000022246	larp1	87	68.404	ENSTTRG00000015934	LARP1	99	67.729	Tursiops_truncatus
ENSAPEG00000022246	larp1	97	64.110	ENSUAMG00000019334	LARP1	98	64.513	Ursus_americanus
ENSAPEG00000022246	larp1	85	68.345	ENSUMAG00000002934	LARP1	96	69.066	Ursus_maritimus
ENSAPEG00000022246	larp1	81	72.274	ENSVVUG00000004644	LARP1	96	71.940	Vulpes_vulpes
ENSAPEG00000022246	larp1	93	70.198	ENSXETG00000008413	larp1	99	67.787	Xenopus_tropicalis
ENSAPEG00000022246	larp1	86	84.417	ENSXCOG00000004022	larp1	98	84.396	Xiphophorus_couchianus
ENSAPEG00000022246	larp1	100	84.559	ENSXMAG00000018780	larp1	100	84.832	Xiphophorus_maculatus