EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000022338 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 27122 bases
Position: chr12:8724220-8751341
Accession: ZDB-GENE-030131-6451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000031539	TUDOR	PF00567.24	4.9e-74	1	5
ENSAPEP00000031539	TUDOR	PF00567.24	4.9e-74	2	5
ENSAPEP00000031539	TUDOR	PF00567.24	4.9e-74	3	5
ENSAPEP00000031539	TUDOR	PF00567.24	4.9e-74	4	5
ENSAPEP00000031539	TUDOR	PF00567.24	4.9e-74	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000032372	-	3912	-	ENSAPEP00000031539	1303 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000022338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000022338	rnf17	77	40.351	ENSAPEG00000015328	tdrd6	73	38.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022338	rnf17	97	31.865	ENSG00000132972	RNF17	99	34.857	Homo_sapiens
ENSAPEG00000022338	rnf17	86	78.185	ENSAPOG00000017034	rnf17	87	78.185	Acanthochromis_polyacanthus
ENSAPEG00000022338	rnf17	95	31.818	ENSAMEG00000017340	RNF17	86	32.290	Ailuropoda_melanoleuca
ENSAPEG00000022338	rnf17	93	97.531	ENSAOCG00000018283	rnf17	96	78.526	Amphiprion_ocellaris
ENSAPEG00000022338	rnf17	84	65.619	ENSATEG00000002067	rnf17	85	65.157	Anabas_testudineus
ENSAPEG00000022338	rnf17	84	33.845	ENSAPLG00000003969	RNF17	85	33.764	Anas_platyrhynchos
ENSAPEG00000022338	rnf17	83	35.803	ENSACAG00000001418	RNF17	75	35.803	Anolis_carolinensis
ENSAPEG00000022338	rnf17	96	66.327	ENSACLG00000018279	rnf17	89	66.327	Astatotilapia_calliptera
ENSAPEG00000022338	rnf17	99	44.703	ENSAMXG00000011002	rnf17	99	44.561	Astyanax_mexicanus
ENSAPEG00000022338	rnf17	86	33.785	ENSCJAG00000018937	RNF17	98	36.098	Callithrix_jacchus
ENSAPEG00000022338	rnf17	92	31.714	ENSCAFG00000007418	RNF17	85	31.498	Canis_familiaris
ENSAPEG00000022338	rnf17	84	33.630	ENSCHIG00000026716	RNF17	98	34.251	Capra_hircus
ENSAPEG00000022338	rnf17	97	31.510	ENSTSYG00000000365	RNF17	97	34.750	Carlito_syrichta
ENSAPEG00000022338	rnf17	98	31.543	ENSCCAG00000026725	RNF17	97	35.616	Cebus_capucinus
ENSAPEG00000022338	rnf17	97	31.878	ENSCATG00000040352	RNF17	98	36.073	Cercocebus_atys
ENSAPEG00000022338	rnf17	83	34.628	ENSCLAG00000004127	RNF17	74	34.822	Chinchilla_lanigera
ENSAPEG00000022338	rnf17	97	31.306	ENSCSAG00000018019	RNF17	88	31.488	Chlorocebus_sabaeus
ENSAPEG00000022338	rnf17	95	33.286	ENSCPBG00000020920	RNF17	91	33.380	Chrysemys_picta_bellii
ENSAPEG00000022338	rnf17	97	31.978	ENSCANG00000032927	RNF17	98	36.225	Colobus_angolensis_palliatus
ENSAPEG00000022338	rnf17	83	34.243	ENSCGRG00001022658	Rnf17	73	34.574	Cricetulus_griseus_chok1gshd
ENSAPEG00000022338	rnf17	83	34.243	ENSCGRG00000009924	Rnf17	73	34.574	Cricetulus_griseus_crigri
ENSAPEG00000022338	rnf17	99	53.139	ENSCSEG00000008626	rnf17	100	52.843	Cynoglossus_semilaevis
ENSAPEG00000022338	rnf17	92	51.762	ENSCVAG00000017008	rnf17	100	51.762	Cyprinodon_variegatus
ENSAPEG00000022338	rnf17	93	47.864	ENSDARG00000056387	rnf17	82	47.465	Danio_rerio
ENSAPEG00000022338	rnf17	84	33.279	ENSDNOG00000006115	RNF17	74	33.279	Dasypus_novemcinctus
ENSAPEG00000022338	rnf17	83	34.537	ENSECAG00000017152	RNF17	72	34.565	Equus_caballus
ENSAPEG00000022338	rnf17	56	57.895	ENSEEUG00000000332	RNF17	53	59.459	Erinaceus_europaeus
ENSAPEG00000022338	rnf17	93	51.426	ENSELUG00000005626	rnf17	84	50.923	Esox_lucius
ENSAPEG00000022338	rnf17	95	31.740	ENSFCAG00000004914	RNF17	98	34.756	Felis_catus
ENSAPEG00000022338	rnf17	97	32.277	ENSFALG00000008766	RNF17	89	32.133	Ficedula_albicollis
ENSAPEG00000022338	rnf17	83	33.195	ENSFDAG00000017857	RNF17	73	33.167	Fukomys_damarensis
ENSAPEG00000022338	rnf17	90	61.021	ENSFHEG00000014822	rnf17	79	61.021	Fundulus_heteroclitus
ENSAPEG00000022338	rnf17	77	47.071	ENSGMOG00000015560	-	100	47.071	Gadus_morhua
ENSAPEG00000022338	rnf17	93	62.834	ENSGAFG00000004463	rnf17	99	62.930	Gambusia_affinis
ENSAPEG00000022338	rnf17	92	33.146	ENSGAGG00000016999	RNF17	81	32.824	Gopherus_agassizii
ENSAPEG00000022338	rnf17	97	32.066	ENSGGOG00000014491	RNF17	98	36.073	Gorilla_gorilla
ENSAPEG00000022338	rnf17	96	67.347	ENSHBUG00000003554	rnf17	89	67.347	Haplochromis_burtoni
ENSAPEG00000022338	rnf17	83	33.803	ENSHGLG00000007270	RNF17	73	33.803	Heterocephalus_glaber_female
ENSAPEG00000022338	rnf17	83	33.720	ENSHGLG00100017393	RNF17	74	33.720	Heterocephalus_glaber_male
ENSAPEG00000022338	rnf17	93	50.497	ENSHCOG00000017676	rnf17	99	50.345	Hippocampus_comes
ENSAPEG00000022338	rnf17	96	46.375	ENSIPUG00000001087	rnf17	93	46.450	Ictalurus_punctatus
ENSAPEG00000022338	rnf17	83	34.217	ENSJJAG00000016584	Rnf17	73	33.969	Jaculus_jaculus
ENSAPEG00000022338	rnf17	92	75.309	ENSKMAG00000013403	rnf17	81	75.309	Kryptolebias_marmoratus
ENSAPEG00000022338	rnf17	87	62.545	ENSLBEG00000014910	rnf17	87	62.455	Labrus_bergylta
ENSAPEG00000022338	rnf17	76	33.304	ENSLACG00000000323	RNF17	99	33.129	Latimeria_chalumnae
ENSAPEG00000022338	rnf17	83	38.376	ENSLOCG00000010768	rnf17	74	38.309	Lepisosteus_oculatus
ENSAPEG00000022338	rnf17	97	32.113	ENSMFAG00000032388	RNF17	98	36.225	Macaca_fascicularis
ENSAPEG00000022338	rnf17	97	32.113	ENSMMUG00000014610	RNF17	98	36.225	Macaca_mulatta
ENSAPEG00000022338	rnf17	97	32.113	ENSMNEG00000011234	RNF17	98	36.225	Macaca_nemestrina
ENSAPEG00000022338	rnf17	97	31.972	ENSMLEG00000030227	RNF17	88	32.086	Mandrillus_leucophaeus
ENSAPEG00000022338	rnf17	94	62.578	ENSMAMG00000020403	rnf17	99	62.478	Mastacembelus_armatus
ENSAPEG00000022338	rnf17	96	65.894	ENSMZEG00005019166	rnf17	89	65.315	Maylandia_zebra
ENSAPEG00000022338	rnf17	83	32.807	ENSMGAG00000015138	RNF17	96	32.587	Meleagris_gallopavo
ENSAPEG00000022338	rnf17	83	34.878	ENSMAUG00000004788	Rnf17	73	34.878	Mesocricetus_auratus
ENSAPEG00000022338	rnf17	98	31.431	ENSMICG00000010364	RNF17	97	35.061	Microcebus_murinus
ENSAPEG00000022338	rnf17	59	34.328	ENSMOCG00000011818	-	99	34.368	Microtus_ochrogaster
ENSAPEG00000022338	rnf17	95	77.206	ENSMMOG00000019514	rnf17	99	77.206	Mola_mola
ENSAPEG00000022338	rnf17	83	34.959	ENSMODG00000007827	RNF17	72	34.545	Monodelphis_domestica
ENSAPEG00000022338	rnf17	81	72.840	ENSMALG00000016943	rnf17	80	72.840	Monopterus_albus
ENSAPEG00000022338	rnf17	83	34.682	MGP_CAROLIEiJ_G0019337	Rnf17	73	34.628	Mus_caroli
ENSAPEG00000022338	rnf17	83	34.600	ENSMUSG00000000365	Rnf17	73	34.545	Mus_musculus
ENSAPEG00000022338	rnf17	83	35.260	MGP_PahariEiJ_G0030355	Rnf17	73	35.260	Mus_pahari
ENSAPEG00000022338	rnf17	83	34.682	MGP_SPRETEiJ_G0020228	Rnf17	73	34.876	Mus_spretus
ENSAPEG00000022338	rnf17	95	31.838	ENSMPUG00000013305	RNF17	86	31.860	Mustela_putorius_furo
ENSAPEG00000022338	rnf17	83	33.799	ENSMLUG00000003903	RNF17	76	33.386	Myotis_lucifugus
ENSAPEG00000022338	rnf17	83	35.372	ENSNGAG00000013553	Rnf17	73	34.988	Nannospalax_galili
ENSAPEG00000022338	rnf17	99	62.632	ENSNBRG00000012006	rnf17	100	62.632	Neolamprologus_brichardi
ENSAPEG00000022338	rnf17	97	32.061	ENSNLEG00000013780	RNF17	98	36.239	Nomascus_leucogenys
ENSAPEG00000022338	rnf17	58	42.254	ENSMEUG00000003276	-	50	42.342	Notamacropus_eugenii
ENSAPEG00000022338	rnf17	96	65.894	ENSONIG00000015746	rnf17	100	65.465	Oreochromis_niloticus
ENSAPEG00000022338	rnf17	83	34.298	ENSOCUG00000007384	RNF17	73	34.326	Oryctolagus_cuniculus
ENSAPEG00000022338	rnf17	97	52.106	ENSORLG00000012818	rnf17	99	52.432	Oryzias_latipes
ENSAPEG00000022338	rnf17	96	52.074	ENSORLG00020009879	-	89	52.333	Oryzias_latipes_hni
ENSAPEG00000022338	rnf17	96	52.221	ENSORLG00015013027	-	89	52.552	Oryzias_latipes_hsok
ENSAPEG00000022338	rnf17	85	52.825	ENSOMEG00000009891	rnf17	99	52.825	Oryzias_melastigma
ENSAPEG00000022338	rnf17	83	33.607	ENSOGAG00000014803	RNF17	74	33.773	Otolemur_garnettii
ENSAPEG00000022338	rnf17	84	33.791	ENSOARG00000014641	RNF17	75	33.711	Ovis_aries
ENSAPEG00000022338	rnf17	83	34.641	ENSPPAG00000028779	RNF17	98	36.086	Pan_paniscus
ENSAPEG00000022338	rnf17	95	31.860	ENSPPRG00000009230	RNF17	98	34.756	Panthera_pardus
ENSAPEG00000022338	rnf17	95	31.860	ENSPTIG00000001738	RNF17	98	34.756	Panthera_tigris_altaica
ENSAPEG00000022338	rnf17	97	31.793	ENSPTRG00000005713	RNF17	98	36.086	Pan_troglodytes
ENSAPEG00000022338	rnf17	97	32.296	ENSPANG00000007640	RNF17	98	36.073	Papio_anubis
ENSAPEG00000022338	rnf17	83	45.086	ENSPKIG00000001648	rnf17	90	44.819	Paramormyrops_kingsleyae
ENSAPEG00000022338	rnf17	83	36.132	ENSPSIG00000011245	RNF17	99	36.132	Pelodiscus_sinensis
ENSAPEG00000022338	rnf17	83	34.711	ENSPEMG00000008693	Rnf17	73	34.959	Peromyscus_maniculatus_bairdii
ENSAPEG00000022338	rnf17	79	33.985	ENSPCIG00000009190	-	95	33.985	Phascolarctos_cinereus
ENSAPEG00000022338	rnf17	88	64.935	ENSPFOG00000007124	rnf17	85	64.935	Poecilia_formosa
ENSAPEG00000022338	rnf17	94	74.194	ENSPLAG00000006198	rnf17	90	74.194	Poecilia_latipinna
ENSAPEG00000022338	rnf17	91	74.194	ENSPMEG00000022432	rnf17	81	74.194	Poecilia_mexicana
ENSAPEG00000022338	rnf17	97	65.588	ENSPREG00000001414	rnf17	95	64.265	Poecilia_reticulata
ENSAPEG00000022338	rnf17	97	31.989	ENSPPYG00000005215	RNF17	87	32.103	Pongo_abelii
ENSAPEG00000022338	rnf17	54	36.473	ENSPCAG00000002665	RNF17	51	36.473	Procavia_capensis
ENSAPEG00000022338	rnf17	80	46.324	ENSPVAG00000013021	RNF17	74	46.324	Pteropus_vampyrus
ENSAPEG00000022338	rnf17	99	47.042	ENSPNAG00000027505	rnf17	99	47.249	Pygocentrus_nattereri
ENSAPEG00000022338	rnf17	83	34.679	ENSRNOG00000008059	Rnf17	73	35.173	Rattus_norvegicus
ENSAPEG00000022338	rnf17	83	33.633	ENSRBIG00000027010	RNF17	78	33.716	Rhinopithecus_bieti
ENSAPEG00000022338	rnf17	97	31.579	ENSRROG00000022801	RNF17	98	36.225	Rhinopithecus_roxellana
ENSAPEG00000022338	rnf17	98	31.887	ENSSBOG00000021661	RNF17	97	35.769	Saimiri_boliviensis_boliviensis
ENSAPEG00000022338	rnf17	83	33.964	ENSSHAG00000005609	RNF17	73	33.773	Sarcophilus_harrisii
ENSAPEG00000022338	rnf17	83	45.044	ENSSFOG00015023037	rnf17	89	44.711	Scleropages_formosus
ENSAPEG00000022338	rnf17	83	63.977	ENSSMAG00000007429	rnf17	81	63.508	Scophthalmus_maximus
ENSAPEG00000022338	rnf17	84	73.267	ENSSDUG00000013530	rnf17	84	72.549	Seriola_dumerili
ENSAPEG00000022338	rnf17	86	80.952	ENSSLDG00000019577	rnf17	85	80.952	Seriola_lalandi_dorsalis
ENSAPEG00000022338	rnf17	79	33.922	ENSSARG00000003016	RNF17	63	33.922	Sorex_araneus
ENSAPEG00000022338	rnf17	92	32.903	ENSSPUG00000008917	RNF17	90	32.851	Sphenodon_punctatus
ENSAPEG00000022338	rnf17	84	74.166	ENSSPAG00000001925	rnf17	89	74.166	Stegastes_partitus
ENSAPEG00000022338	rnf17	83	34.761	ENSSSCG00000009572	RNF17	82	34.537	Sus_scrofa
ENSAPEG00000022338	rnf17	66	33.766	ENSTGUG00000011267	-	100	33.766	Taeniopygia_guttata
ENSAPEG00000022338	rnf17	98	49.173	ENSTRUG00000015498	rnf17	90	48.958	Takifugu_rubripes
ENSAPEG00000022338	rnf17	83	53.322	ENSTNIG00000015681	rnf17	99	53.494	Tetraodon_nigroviridis
ENSAPEG00000022338	rnf17	82	36.706	ENSTBEG00000000282	RNF17	72	36.967	Tupaia_belangeri
ENSAPEG00000022338	rnf17	83	37.014	ENSTTRG00000012698	RNF17	74	37.014	Tursiops_truncatus
ENSAPEG00000022338	rnf17	59	48.092	ENSVPAG00000011388	RNF17	60	48.092	Vicugna_pacos
ENSAPEG00000022338	rnf17	95	31.786	ENSVVUG00000006226	RNF17	87	31.974	Vulpes_vulpes
ENSAPEG00000022338	rnf17	79	31.250	ENSXETG00000034020	RNF17	99	39.950	Xenopus_tropicalis
ENSAPEG00000022338	rnf17	85	62.476	ENSXCOG00000018295	rnf17	99	55.741	Xiphophorus_couchianus
ENSAPEG00000022338	rnf17	93	56.014	ENSXMAG00000014747	rnf17	99	57.028	Xiphophorus_maculatus