EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000022632 (Gene tree)
Gene ID: -
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 15015 bases
Position: chr3:40794451-40809465
Accession: ZDB-GENE-030131-6146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000031867	PPR	PF01535.20	1.7e-13	1	2
ENSAPEP00000031867	PPR	PF01535.20	1.7e-13	2	2
ENSAPEP00000031876	PPR	PF01535.20	2.3e-13	1	2
ENSAPEP00000031876	PPR	PF01535.20	2.3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000032713	-	3613	-	ENSAPEP00000031867	700 (aa)	-	-
ENSAPET00000032722	-	3490	-	ENSAPEP00000031876	701 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000022632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022632's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022632	ptcd1	84	47.308	ENSG00000106246	PTCD1	92	45.649	Homo_sapiens
ENSAPEG00000022632	ptcd1	84	47.308	ENSG00000248919	ATP5MF-PTCD1	90	44.868	Homo_sapiens
ENSAPEG00000022632	ptcd1	89	87.480	ENSAPOG00000010679	ptcd1	96	87.480	Acanthochromis_polyacanthus
ENSAPEG00000022632	ptcd1	91	46.936	ENSAMEG00000006224	-	87	46.936	Ailuropoda_melanoleuca
ENSAPEG00000022632	ptcd1	93	70.827	ENSACIG00000017861	ptcd1	97	70.827	Amphilophus_citrinellus
ENSAPEG00000022632	ptcd1	89	99.196	ENSAOCG00000022617	ptcd1	94	99.196	Amphiprion_ocellaris
ENSAPEG00000022632	ptcd1	100	99.000	ENSAOCG00000020741	-	100	99.000	Amphiprion_ocellaris
ENSAPEG00000022632	ptcd1	99	67.832	ENSATEG00000007016	ptcd1	99	68.252	Anabas_testudineus
ENSAPEG00000022632	ptcd1	80	48.123	ENSAPLG00000006862	-	93	47.619	Anas_platyrhynchos
ENSAPEG00000022632	ptcd1	86	46.497	ENSACAG00000012871	-	83	46.497	Anolis_carolinensis
ENSAPEG00000022632	ptcd1	80	48.904	ENSANAG00000035790	-	86	48.495	Aotus_nancymaae
ENSAPEG00000022632	ptcd1	99	68.073	ENSACLG00000002824	ptcd1	99	68.073	Astatotilapia_calliptera
ENSAPEG00000022632	ptcd1	82	51.050	ENSAMXG00000037292	ptcd1	87	51.290	Astyanax_mexicanus
ENSAPEG00000022632	ptcd1	88	46.071	ENSBTAG00000020440	-	80	46.451	Bos_taurus
ENSAPEG00000022632	ptcd1	81	49.066	ENSCJAG00000015815	-	84	48.735	Callithrix_jacchus
ENSAPEG00000022632	ptcd1	87	48.025	ENSCAFG00000015055	-	83	48.025	Canis_familiaris
ENSAPEG00000022632	ptcd1	87	48.025	ENSCAFG00020014480	-	83	48.025	Canis_lupus_dingo
ENSAPEG00000022632	ptcd1	93	46.519	ENSCHIG00000027000	-	95	46.667	Capra_hircus
ENSAPEG00000022632	ptcd1	80	49.231	ENSTSYG00000029495	-	90	46.782	Carlito_syrichta
ENSAPEG00000022632	ptcd1	91	45.727	ENSCAPG00000014660	-	99	45.727	Cavia_aperea
ENSAPEG00000022632	ptcd1	92	46.006	ENSCPOG00000001780	-	94	46.006	Cavia_porcellus
ENSAPEG00000022632	ptcd1	81	48.571	ENSCCAG00000034025	-	84	48.247	Cebus_capucinus
ENSAPEG00000022632	ptcd1	93	45.228	ENSCATG00000040859	-	96	45.228	Cercocebus_atys
ENSAPEG00000022632	ptcd1	87	46.845	ENSCLAG00000006354	-	94	45.549	Chinchilla_lanigera
ENSAPEG00000022632	ptcd1	77	47.943	ENSCSAG00000017794	-	92	45.295	Chlorocebus_sabaeus
ENSAPEG00000022632	ptcd1	84	46.226	ENSCPBG00000020866	-	85	46.226	Chrysemys_picta_bellii
ENSAPEG00000022632	ptcd1	74	30.713	ENSCING00000007717	-	91	30.713	Ciona_intestinalis
ENSAPEG00000022632	ptcd1	89	46.248	ENSCANG00000023441	-	92	46.248	Colobus_angolensis_palliatus
ENSAPEG00000022632	ptcd1	89	46.142	ENSCGRG00001023686	Ptcd1	92	46.379	Cricetulus_griseus_chok1gshd
ENSAPEG00000022632	ptcd1	88	46.311	ENSCGRG00000015031	Ptcd1	90	46.552	Cricetulus_griseus_crigri
ENSAPEG00000022632	ptcd1	94	59.057	ENSCSEG00000002378	ptcd1	93	59.499	Cynoglossus_semilaevis
ENSAPEG00000022632	ptcd1	99	65.903	ENSCVAG00000015826	ptcd1	99	65.903	Cyprinodon_variegatus
ENSAPEG00000022632	ptcd1	92	67.287	ENSCVAG00000003621	ptcd1	97	66.821	Cyprinodon_variegatus
ENSAPEG00000022632	ptcd1	82	52.658	ENSDARG00000076176	ptcd1	86	52.658	Danio_rerio
ENSAPEG00000022632	ptcd1	81	48.409	ENSDNOG00000009957	-	83	48.409	Dasypus_novemcinctus
ENSAPEG00000022632	ptcd1	81	48.480	ENSDORG00000000740	Ptcd1	88	47.541	Dipodomys_ordii
ENSAPEG00000022632	ptcd1	71	52.577	ENSEBUG00000014515	ptcd1	93	52.577	Eptatretus_burgeri
ENSAPEG00000022632	ptcd1	88	47.031	ENSEASG00005002480	-	90	47.270	Equus_asinus_asinus
ENSAPEG00000022632	ptcd1	88	46.739	ENSECAG00000016617	-	90	47.344	Equus_caballus
ENSAPEG00000022632	ptcd1	95	52.072	ENSELUG00000016517	ptcd1	97	52.072	Esox_lucius
ENSAPEG00000022632	ptcd1	86	47.695	ENSFCAG00000015069	-	88	47.695	Felis_catus
ENSAPEG00000022632	ptcd1	80	48.398	ENSFALG00000013803	-	87	46.929	Ficedula_albicollis
ENSAPEG00000022632	ptcd1	94	46.097	ENSFDAG00000006393	-	95	46.097	Fukomys_damarensis
ENSAPEG00000022632	ptcd1	78	68.659	ENSFHEG00000012491	ptcd1	95	68.659	Fundulus_heteroclitus
ENSAPEG00000022632	ptcd1	87	59.646	ENSGMOG00000007639	ptcd1	100	59.646	Gadus_morhua
ENSAPEG00000022632	ptcd1	80	46.633	ENSGALG00000004711	-	94	44.148	Gallus_gallus
ENSAPEG00000022632	ptcd1	98	61.864	ENSGAFG00000013175	ptcd1	99	62.606	Gambusia_affinis
ENSAPEG00000022632	ptcd1	90	69.147	ENSGACG00000016607	ptcd1	99	69.147	Gasterosteus_aculeatus
ENSAPEG00000022632	ptcd1	78	47.425	ENSGAGG00000021832	-	85	46.701	Gopherus_agassizii
ENSAPEG00000022632	ptcd1	81	47.913	ENSGGOG00000015123	-	92	45.359	Gorilla_gorilla
ENSAPEG00000022632	ptcd1	99	67.455	ENSHBUG00000018275	ptcd1	100	67.455	Haplochromis_burtoni
ENSAPEG00000022632	ptcd1	88	46.904	ENSHGLG00000017621	-	92	46.235	Heterocephalus_glaber_female
ENSAPEG00000022632	ptcd1	88	46.904	ENSHGLG00100007218	-	92	46.235	Heterocephalus_glaber_male
ENSAPEG00000022632	ptcd1	99	56.125	ENSHCOG00000010784	ptcd1	99	57.041	Hippocampus_comes
ENSAPEG00000022632	ptcd1	85	47.596	ENSSTOG00000001682	-	88	47.756	Ictidomys_tridecemlineatus
ENSAPEG00000022632	ptcd1	87	47.867	ENSJJAG00000000319	Ptcd1	90	47.867	Jaculus_jaculus
ENSAPEG00000022632	ptcd1	94	66.172	ENSKMAG00000008708	ptcd1	95	66.617	Kryptolebias_marmoratus
ENSAPEG00000022632	ptcd1	99	64.336	ENSLBEG00000008061	ptcd1	99	64.336	Labrus_bergylta
ENSAPEG00000022632	ptcd1	83	48.339	ENSLACG00000011172	ptcd1	85	48.671	Latimeria_chalumnae
ENSAPEG00000022632	ptcd1	80	53.234	ENSLOCG00000004833	ptcd1	91	52.921	Lepisosteus_oculatus
ENSAPEG00000022632	ptcd1	84	47.326	ENSLAFG00000002588	-	94	45.171	Loxodonta_africana
ENSAPEG00000022632	ptcd1	84	47.720	ENSMFAG00000041324	-	96	45.374	Macaca_fascicularis
ENSAPEG00000022632	ptcd1	84	47.720	ENSMMUG00000030408	-	96	45.374	Macaca_mulatta
ENSAPEG00000022632	ptcd1	93	45.374	ENSMNEG00000043786	-	96	45.374	Macaca_nemestrina
ENSAPEG00000022632	ptcd1	93	35.469	ENSMLEG00000031179	-	95	36.513	Mandrillus_leucophaeus
ENSAPEG00000022632	ptcd1	95	66.716	ENSMAMG00000007623	ptcd1	95	66.716	Mastacembelus_armatus
ENSAPEG00000022632	ptcd1	99	67.932	ENSMZEG00005012722	ptcd1	99	67.932	Maylandia_zebra
ENSAPEG00000022632	ptcd1	89	44.461	ENSMGAG00000004211	-	86	44.611	Meleagris_gallopavo
ENSAPEG00000022632	ptcd1	92	44.060	ENSMICG00000017428	-	95	44.060	Microcebus_murinus
ENSAPEG00000022632	ptcd1	100	67.917	ENSMMOG00000020243	ptcd1	99	67.917	Mola_mola
ENSAPEG00000022632	ptcd1	81	46.689	ENSMODG00000001350	-	81	46.689	Monodelphis_domestica
ENSAPEG00000022632	ptcd1	96	69.855	ENSMALG00000018442	ptcd1	99	68.428	Monopterus_albus
ENSAPEG00000022632	ptcd1	83	46.932	MGP_CAROLIEiJ_G0028011	Ptcd1	85	46.446	Mus_caroli
ENSAPEG00000022632	ptcd1	83	46.600	ENSMUSG00000029624	Ptcd1	85	46.833	Mus_musculus
ENSAPEG00000022632	ptcd1	90	45.289	MGP_PahariEiJ_G0024580	Ptcd1	93	45.289	Mus_pahari
ENSAPEG00000022632	ptcd1	83	46.600	MGP_SPRETEiJ_G0029012	Ptcd1	93	45.166	Mus_spretus
ENSAPEG00000022632	ptcd1	88	47.123	ENSMPUG00000016518	-	90	47.988	Mustela_putorius_furo
ENSAPEG00000022632	ptcd1	84	48.293	ENSMLUG00000010994	-	89	45.655	Myotis_lucifugus
ENSAPEG00000022632	ptcd1	98	66.003	ENSNBRG00000010079	ptcd1	96	68.852	Neolamprologus_brichardi
ENSAPEG00000022632	ptcd1	72	47.137	ENSNLEG00000011060	-	87	47.137	Nomascus_leucogenys
ENSAPEG00000022632	ptcd1	81	47.871	ENSMEUG00000006930	-	84	47.871	Notamacropus_eugenii
ENSAPEG00000022632	ptcd1	74	51.095	ENSOPRG00000013647	-	78	50.685	Ochotona_princeps
ENSAPEG00000022632	ptcd1	84	70.266	ENSONIG00000003168	ptcd1	99	70.266	Oreochromis_niloticus
ENSAPEG00000022632	ptcd1	85	45.586	ENSOANG00000007728	-	80	45.527	Ornithorhynchus_anatinus
ENSAPEG00000022632	ptcd1	90	46.330	ENSOCUG00000010584	-	90	46.330	Oryctolagus_cuniculus
ENSAPEG00000022632	ptcd1	99	63.037	ENSORLG00000009275	ptcd1	99	63.037	Oryzias_latipes
ENSAPEG00000022632	ptcd1	97	63.942	ENSORLG00020000988	ptcd1	99	63.942	Oryzias_latipes_hni
ENSAPEG00000022632	ptcd1	97	63.703	ENSORLG00015010557	ptcd1	99	63.703	Oryzias_latipes_hsok
ENSAPEG00000022632	ptcd1	96	65.147	ENSOMEG00000020627	ptcd1	99	65.147	Oryzias_melastigma
ENSAPEG00000022632	ptcd1	82	46.333	ENSOGAG00000010877	-	97	43.275	Otolemur_garnettii
ENSAPEG00000022632	ptcd1	93	43.594	ENSOARG00000018676	-	96	43.741	Ovis_aries
ENSAPEG00000022632	ptcd1	84	47.125	ENSPPAG00000036024	-	96	44.892	Pan_paniscus
ENSAPEG00000022632	ptcd1	87	47.559	ENSPPRG00000003478	-	90	47.559	Panthera_pardus
ENSAPEG00000022632	ptcd1	84	47.284	ENSPTRG00000019452	-	96	44.877	Pan_troglodytes
ENSAPEG00000022632	ptcd1	93	45.521	ENSPANG00000016730	-	96	45.521	Papio_anubis
ENSAPEG00000022632	ptcd1	85	50.487	ENSPKIG00000014215	ptcd1	89	50.487	Paramormyrops_kingsleyae
ENSAPEG00000022632	ptcd1	80	47.692	ENSPSIG00000011184	-	98	47.692	Pelodiscus_sinensis
ENSAPEG00000022632	ptcd1	71	39.015	ENSPMAG00000009667	ptcd1	100	39.015	Petromyzon_marinus
ENSAPEG00000022632	ptcd1	85	45.298	ENSPCIG00000024778	-	86	45.298	Phascolarctos_cinereus
ENSAPEG00000022632	ptcd1	99	60.839	ENSPFOG00000004458	ptcd1	99	61.798	Poecilia_formosa
ENSAPEG00000022632	ptcd1	98	61.175	ENSPLAG00000011051	ptcd1	98	61.891	Poecilia_latipinna
ENSAPEG00000022632	ptcd1	99	61.905	ENSPMEG00000020547	ptcd1	99	62.166	Poecilia_mexicana
ENSAPEG00000022632	ptcd1	98	61.373	ENSPREG00000000059	ptcd1	98	61.516	Poecilia_reticulata
ENSAPEG00000022632	ptcd1	87	46.395	ENSPPYG00000017377	-	95	46.395	Pongo_abelii
ENSAPEG00000022632	ptcd1	71	55.556	ENSPCAG00000001852	-	80	55.556	Procavia_capensis
ENSAPEG00000022632	ptcd1	82	47.635	ENSPCOG00000018596	-	88	46.353	Propithecus_coquereli
ENSAPEG00000022632	ptcd1	60	50.313	ENSPVAG00000007529	-	66	50.313	Pteropus_vampyrus
ENSAPEG00000022632	ptcd1	99	67.511	ENSPNYG00000019993	ptcd1	99	67.511	Pundamilia_nyererei
ENSAPEG00000022632	ptcd1	88	51.250	ENSPNAG00000014931	ptcd1	92	52.031	Pygocentrus_nattereri
ENSAPEG00000022632	ptcd1	85	46.365	ENSRNOG00000000987	Ptcd1	88	46.885	Rattus_norvegicus
ENSAPEG00000022632	ptcd1	93	45.228	ENSRBIG00000043393	-	96	45.228	Rhinopithecus_bieti
ENSAPEG00000022632	ptcd1	93	45.760	ENSRROG00000036420	-	96	45.760	Rhinopithecus_roxellana
ENSAPEG00000022632	ptcd1	81	48.500	ENSSBOG00000024114	-	84	48.179	Saimiri_boliviensis_boliviensis
ENSAPEG00000022632	ptcd1	85	47.145	ENSSHAG00000011376	-	89	48.547	Sarcophilus_harrisii
ENSAPEG00000022632	ptcd1	84	52.443	ENSSFOG00015007909	ptcd1	83	52.443	Scleropages_formosus
ENSAPEG00000022632	ptcd1	88	64.151	ENSSMAG00000000218	ptcd1	99	64.465	Scophthalmus_maximus
ENSAPEG00000022632	ptcd1	94	69.527	ENSSDUG00000015671	ptcd1	98	69.527	Seriola_dumerili
ENSAPEG00000022632	ptcd1	93	69.585	ENSSLDG00000014261	ptcd1	96	69.585	Seriola_lalandi_dorsalis
ENSAPEG00000022632	ptcd1	85	46.311	ENSSPUG00000003540	-	86	46.311	Sphenodon_punctatus
ENSAPEG00000022632	ptcd1	100	75.900	ENSSPAG00000011049	ptcd1	100	76.039	Stegastes_partitus
ENSAPEG00000022632	ptcd1	81	50.000	ENSSSCG00000007622	-	95	47.785	Sus_scrofa
ENSAPEG00000022632	ptcd1	80	47.652	ENSTGUG00000007563	-	94	47.652	Taeniopygia_guttata
ENSAPEG00000022632	ptcd1	96	64.358	ENSTRUG00000013471	ptcd1	99	62.989	Takifugu_rubripes
ENSAPEG00000022632	ptcd1	94	63.964	ENSTNIG00000008271	ptcd1	99	62.832	Tetraodon_nigroviridis
ENSAPEG00000022632	ptcd1	93	45.588	ENSTBEG00000011021	-	95	45.588	Tupaia_belangeri
ENSAPEG00000022632	ptcd1	92	45.045	ENSTTRG00000003006	-	95	45.045	Tursiops_truncatus
ENSAPEG00000022632	ptcd1	88	46.501	ENSUAMG00000008049	-	89	47.077	Ursus_americanus
ENSAPEG00000022632	ptcd1	87	48.576	ENSVVUG00000008836	-	89	48.576	Vulpes_vulpes
ENSAPEG00000022632	ptcd1	91	44.769	ENSXETG00000009891	ptcd1	92	44.769	Xenopus_tropicalis
ENSAPEG00000022632	ptcd1	98	62.162	ENSXMAG00000015540	ptcd1	99	62.589	Xiphophorus_maculatus