EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000022779 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 17609 bases
Position: chr21:6993787-7011395
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000032106	RRM_1	PF00076.22	6.2e-05	1	1
ENSAPEP00000032092	RRM_1	PF00076.22	6.3e-05	1	1
ENSAPEP00000032078	RRM_1	PF00076.22	6.6e-05	1	1
ENSAPEP00000032092	G-patch	PF01585.23	4.5e-13	1	1
ENSAPEP00000032106	G-patch	PF01585.23	4.6e-13	1	1
ENSAPEP00000032078	G-patch	PF01585.23	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000032957	-	1203	-	ENSAPEP00000032106	400 (aa)	-	-
ENSAPET00000032929	-	3623	-	ENSAPEP00000032078	419 (aa)	-	UPI000C30F9D0
ENSAPET00000032943	-	3597	-	ENSAPEP00000032092	404 (aa)	-	UPI000C319CA6

Gene Model

Click here to download ENSAPEG00000022779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022779	rbm17	100	82.801	ENSG00000134453	RBM17	100	82.801	Homo_sapiens
ENSAPEG00000022779	rbm17	99	99.759	ENSAPOG00000007101	rbm17	99	99.759	Acanthochromis_polyacanthus
ENSAPEG00000022779	rbm17	100	83.047	ENSAMEG00000002107	RBM17	100	83.047	Ailuropoda_melanoleuca
ENSAPEG00000022779	rbm17	100	93.827	ENSACIG00000006251	rbm17	100	93.827	Amphilophus_citrinellus
ENSAPEG00000022779	rbm17	100	100.000	ENSAOCG00000014892	rbm17	100	100.000	Amphiprion_ocellaris
ENSAPEG00000022779	rbm17	100	94.774	ENSATEG00000004406	rbm17	100	94.774	Anabas_testudineus
ENSAPEG00000022779	rbm17	100	83.538	ENSAPLG00000004190	RBM17	100	83.538	Anas_platyrhynchos
ENSAPEG00000022779	rbm17	89	80.053	ENSACAG00000005418	RBM17	99	80.053	Anolis_carolinensis
ENSAPEG00000022779	rbm17	100	71.569	ENSANAG00000019330	-	95	85.345	Aotus_nancymaae
ENSAPEG00000022779	rbm17	100	83.292	ENSANAG00000030127	RBM17	98	86.777	Aotus_nancymaae
ENSAPEG00000022779	rbm17	100	94.250	ENSACLG00000003928	rbm17	100	94.250	Astatotilapia_calliptera
ENSAPEG00000022779	rbm17	100	84.870	ENSAMXG00000005853	rbm17	100	86.288	Astyanax_mexicanus
ENSAPEG00000022779	rbm17	100	83.047	ENSBTAG00000021951	RBM17	100	83.047	Bos_taurus
ENSAPEG00000022779	rbm17	100	82.064	ENSBTAG00000011094	-	100	82.064	Bos_taurus
ENSAPEG00000022779	rbm17	74	34.437	WBGene00010233	F58B3.7	97	31.894	Caenorhabditis_elegans
ENSAPEG00000022779	rbm17	100	83.292	ENSCJAG00000020573	RBM17	100	83.292	Callithrix_jacchus
ENSAPEG00000022779	rbm17	100	83.047	ENSCAFG00000005206	RBM17	100	83.047	Canis_familiaris
ENSAPEG00000022779	rbm17	100	79.551	ENSCAFG00020005420	RBM17	100	79.551	Canis_lupus_dingo
ENSAPEG00000022779	rbm17	100	80.835	ENSCHIG00000019921	-	100	80.835	Capra_hircus
ENSAPEG00000022779	rbm17	100	83.047	ENSCHIG00000023204	-	100	83.047	Capra_hircus
ENSAPEG00000022779	rbm17	100	82.439	ENSTSYG00000001165	RBM17	99	88.136	Carlito_syrichta
ENSAPEG00000022779	rbm17	96	63.776	ENSCAPG00000006275	RBM17	100	67.575	Cavia_aperea
ENSAPEG00000022779	rbm17	100	78.465	ENSCPOG00000005679	RBM17	100	78.293	Cavia_porcellus
ENSAPEG00000022779	rbm17	100	83.292	ENSCCAG00000018655	RBM17	98	86.777	Cebus_capucinus
ENSAPEG00000022779	rbm17	100	82.801	ENSCATG00000041566	RBM17	97	87.500	Cercocebus_atys
ENSAPEG00000022779	rbm17	100	82.195	ENSCLAG00000012195	RBM17	99	82.195	Chinchilla_lanigera
ENSAPEG00000022779	rbm17	100	82.801	ENSCSAG00000013564	RBM17	100	82.801	Chlorocebus_sabaeus
ENSAPEG00000022779	rbm17	92	65.426	ENSCHOG00000005131	RBM17	100	65.426	Choloepus_hoffmanni
ENSAPEG00000022779	rbm17	100	83.047	ENSCPBG00000019836	RBM17	100	83.047	Chrysemys_picta_bellii
ENSAPEG00000022779	rbm17	100	46.506	ENSCSAVG00000008782	-	100	45.388	Ciona_savignyi
ENSAPEG00000022779	rbm17	100	82.555	ENSCANG00000030987	RBM17	97	87.500	Colobus_angolensis_palliatus
ENSAPEG00000022779	rbm17	97	74.809	ENSCANG00000023715	-	99	74.619	Colobus_angolensis_palliatus
ENSAPEG00000022779	rbm17	100	82.439	ENSCGRG00001013842	Rbm17	100	82.439	Cricetulus_griseus_chok1gshd
ENSAPEG00000022779	rbm17	100	65.602	ENSCGRG00001009256	-	100	64.865	Cricetulus_griseus_chok1gshd
ENSAPEG00000022779	rbm17	100	82.439	ENSCGRG00000006907	Rbm17	100	82.439	Cricetulus_griseus_crigri
ENSAPEG00000022779	rbm17	100	88.571	ENSCSEG00000018164	rbm17	100	88.571	Cynoglossus_semilaevis
ENSAPEG00000022779	rbm17	100	88.000	ENSCVAG00000002476	rbm17	100	88.250	Cyprinodon_variegatus
ENSAPEG00000022779	rbm17	100	81.324	ENSDARG00000031346	rbm17	100	81.324	Danio_rerio
ENSAPEG00000022779	rbm17	100	82.801	ENSDNOG00000035920	RBM17	100	82.801	Dasypus_novemcinctus
ENSAPEG00000022779	rbm17	99	37.802	FBgn0086683	Spf45	99	37.029	Drosophila_melanogaster
ENSAPEG00000022779	rbm17	86	84.360	ENSETEG00000006642	RBM17	86	84.360	Echinops_telfairi
ENSAPEG00000022779	rbm17	67	69.048	ENSEBUG00000010253	rbm17	89	69.048	Eptatretus_burgeri
ENSAPEG00000022779	rbm17	100	78.519	ENSEASG00005019205	-	100	78.272	Equus_asinus_asinus
ENSAPEG00000022779	rbm17	92	80.053	ENSEASG00005009236	-	100	80.053	Equus_asinus_asinus
ENSAPEG00000022779	rbm17	100	73.219	ENSECAG00000001379	-	100	73.219	Equus_caballus
ENSAPEG00000022779	rbm17	100	71.072	ENSECAG00000008939	RBM17	100	71.605	Equus_caballus
ENSAPEG00000022779	rbm17	86	66.286	ENSEEUG00000013077	RBM17	100	64.571	Erinaceus_europaeus
ENSAPEG00000022779	rbm17	100	87.179	ENSELUG00000006440	rbm17	100	87.179	Esox_lucius
ENSAPEG00000022779	rbm17	100	83.047	ENSFCAG00000031988	RBM17	100	83.047	Felis_catus
ENSAPEG00000022779	rbm17	100	82.555	ENSFALG00000001790	RBM17	100	82.555	Ficedula_albicollis
ENSAPEG00000022779	rbm17	100	82.195	ENSFDAG00000007470	RBM17	100	82.195	Fukomys_damarensis
ENSAPEG00000022779	rbm17	100	93.112	ENSFHEG00000001266	rbm17	100	91.589	Fundulus_heteroclitus
ENSAPEG00000022779	rbm17	99	83.014	ENSGMOG00000008438	rbm17	100	83.014	Gadus_morhua
ENSAPEG00000022779	rbm17	100	83.784	ENSGALG00000006332	RBM17	100	83.784	Gallus_gallus
ENSAPEG00000022779	rbm17	100	94.059	ENSGAFG00000019879	rbm17	100	94.059	Gambusia_affinis
ENSAPEG00000022779	rbm17	99	93.548	ENSGACG00000019174	rbm17	99	93.548	Gasterosteus_aculeatus
ENSAPEG00000022779	rbm17	100	83.047	ENSGAGG00000019906	RBM17	100	83.047	Gopherus_agassizii
ENSAPEG00000022779	rbm17	100	96.535	ENSHBUG00000016624	rbm17	100	96.535	Haplochromis_burtoni
ENSAPEG00000022779	rbm17	100	82.195	ENSHGLG00000011580	RBM17	100	82.195	Heterocephalus_glaber_female
ENSAPEG00000022779	rbm17	100	82.195	ENSHGLG00100010460	RBM17	100	82.195	Heterocephalus_glaber_male
ENSAPEG00000022779	rbm17	100	67.322	ENSHGLG00100010556	-	100	64.619	Heterocephalus_glaber_male
ENSAPEG00000022779	rbm17	99	90.408	ENSHCOG00000010865	rbm17	100	90.408	Hippocampus_comes
ENSAPEG00000022779	rbm17	100	77.412	ENSIPUG00000007699	Rbm17	100	81.882	Ictalurus_punctatus
ENSAPEG00000022779	rbm17	100	82.439	ENSSTOG00000013591	RBM17	100	82.439	Ictidomys_tridecemlineatus
ENSAPEG00000022779	rbm17	100	82.439	ENSJJAG00000022886	Rbm17	100	82.439	Jaculus_jaculus
ENSAPEG00000022779	rbm17	100	61.425	ENSJJAG00000000993	-	100	60.147	Jaculus_jaculus
ENSAPEG00000022779	rbm17	100	93.349	ENSKMAG00000021400	rbm17	100	93.349	Kryptolebias_marmoratus
ENSAPEG00000022779	rbm17	100	95.050	ENSLBEG00000000881	rbm17	100	93.824	Labrus_bergylta
ENSAPEG00000022779	rbm17	99	66.197	ENSLACG00000017297	RBM17	99	66.667	Latimeria_chalumnae
ENSAPEG00000022779	rbm17	100	84.804	ENSLOCG00000015659	rbm17	100	83.942	Lepisosteus_oculatus
ENSAPEG00000022779	rbm17	100	81.796	ENSLAFG00000011629	RBM17	100	81.796	Loxodonta_africana
ENSAPEG00000022779	rbm17	100	82.801	ENSMFAG00000035521	RBM17	97	87.500	Macaca_fascicularis
ENSAPEG00000022779	rbm17	100	82.801	ENSMMUG00000015152	RBM17	97	87.500	Macaca_mulatta
ENSAPEG00000022779	rbm17	100	82.801	ENSMNEG00000017264	RBM17	97	87.500	Macaca_nemestrina
ENSAPEG00000022779	rbm17	100	82.801	ENSMLEG00000029340	RBM17	97	87.500	Mandrillus_leucophaeus
ENSAPEG00000022779	rbm17	100	94.299	ENSMAMG00000000387	rbm17	100	94.299	Mastacembelus_armatus
ENSAPEG00000022779	rbm17	100	96.420	ENSMZEG00005015179	rbm17	100	96.420	Maylandia_zebra
ENSAPEG00000022779	rbm17	100	82.567	ENSMGAG00000003981	RBM17	100	82.567	Meleagris_gallopavo
ENSAPEG00000022779	rbm17	100	82.439	ENSMAUG00000019247	Rbm17	100	82.439	Mesocricetus_auratus
ENSAPEG00000022779	rbm17	100	82.439	ENSMICG00000003976	-	100	82.439	Microcebus_murinus
ENSAPEG00000022779	rbm17	100	76.329	ENSMICG00000041489	-	100	76.329	Microcebus_murinus
ENSAPEG00000022779	rbm17	93	65.526	ENSMOCG00000014517	-	99	65.263	Microtus_ochrogaster
ENSAPEG00000022779	rbm17	100	82.439	ENSMOCG00000011847	Rbm17	100	82.439	Microtus_ochrogaster
ENSAPEG00000022779	rbm17	100	87.042	ENSMMOG00000010264	rbm17	100	87.042	Mola_mola
ENSAPEG00000022779	rbm17	100	82.555	ENSMODG00000016648	RBM17	100	82.555	Monodelphis_domestica
ENSAPEG00000022779	rbm17	100	94.313	ENSMALG00000010597	rbm17	100	95.024	Monopterus_albus
ENSAPEG00000022779	rbm17	100	82.439	MGP_CAROLIEiJ_G0023173	Rbm17	100	82.439	Mus_caroli
ENSAPEG00000022779	rbm17	100	82.439	ENSMUSG00000037197	Rbm17	100	82.439	Mus_musculus
ENSAPEG00000022779	rbm17	100	82.683	MGP_PahariEiJ_G0019233	Rbm17	100	82.683	Mus_pahari
ENSAPEG00000022779	rbm17	100	82.439	MGP_SPRETEiJ_G0024091	Rbm17	100	82.439	Mus_spretus
ENSAPEG00000022779	rbm17	86	81.429	ENSMPUG00000016359	RBM17	96	81.429	Mustela_putorius_furo
ENSAPEG00000022779	rbm17	100	80.779	ENSMLUG00000002302	-	100	80.779	Myotis_lucifugus
ENSAPEG00000022779	rbm17	100	78.378	ENSMLUG00000025709	-	100	77.150	Myotis_lucifugus
ENSAPEG00000022779	rbm17	100	57.357	ENSNGAG00000000663	-	87	76.404	Nannospalax_galili
ENSAPEG00000022779	rbm17	100	82.439	ENSNGAG00000000741	Rbm17	100	82.439	Nannospalax_galili
ENSAPEG00000022779	rbm17	100	90.750	ENSNBRG00000018148	rbm17	100	90.750	Neolamprologus_brichardi
ENSAPEG00000022779	rbm17	100	82.801	ENSNLEG00000033350	RBM17	98	86.777	Nomascus_leucogenys
ENSAPEG00000022779	rbm17	100	77.396	ENSMEUG00000011347	RBM17	100	77.396	Notamacropus_eugenii
ENSAPEG00000022779	rbm17	100	72.236	ENSOPRG00000002993	RBM17	100	72.236	Ochotona_princeps
ENSAPEG00000022779	rbm17	97	63.889	ENSODEG00000007286	-	99	63.636	Octodon_degus
ENSAPEG00000022779	rbm17	100	82.238	ENSODEG00000004393	RBM17	100	82.238	Octodon_degus
ENSAPEG00000022779	rbm17	100	96.798	ENSONIG00000011838	rbm17	100	96.798	Oreochromis_niloticus
ENSAPEG00000022779	rbm17	100	81.863	ENSOANG00000015455	RBM17	100	82.353	Ornithorhynchus_anatinus
ENSAPEG00000022779	rbm17	100	93.824	ENSORLG00000028798	rbm17	100	93.824	Oryzias_latipes
ENSAPEG00000022779	rbm17	100	93.349	ENSORLG00020004593	rbm17	98	93.349	Oryzias_latipes_hni
ENSAPEG00000022779	rbm17	100	94.802	ENSORLG00015000033	rbm17	100	94.802	Oryzias_latipes_hsok
ENSAPEG00000022779	rbm17	100	93.112	ENSOMEG00000012060	rbm17	100	93.112	Oryzias_melastigma
ENSAPEG00000022779	rbm17	100	82.683	ENSOGAG00000015687	RBM17	100	82.683	Otolemur_garnettii
ENSAPEG00000022779	rbm17	100	83.047	ENSOARG00000012975	RBM17	100	83.047	Ovis_aries
ENSAPEG00000022779	rbm17	100	82.801	ENSPPAG00000032347	RBM17	98	86.777	Pan_paniscus
ENSAPEG00000022779	rbm17	100	83.047	ENSPPRG00000010706	RBM17	100	83.047	Panthera_pardus
ENSAPEG00000022779	rbm17	100	83.047	ENSPTIG00000007596	RBM17	100	83.047	Panthera_tigris_altaica
ENSAPEG00000022779	rbm17	100	82.801	ENSPTRG00000002265	RBM17	98	86.777	Pan_troglodytes
ENSAPEG00000022779	rbm17	100	82.801	ENSPANG00000023425	RBM17	97	87.500	Papio_anubis
ENSAPEG00000022779	rbm17	100	82.160	ENSPKIG00000025526	rbm17	100	81.733	Paramormyrops_kingsleyae
ENSAPEG00000022779	rbm17	100	78.555	ENSPKIG00000005048	-	100	79.953	Paramormyrops_kingsleyae
ENSAPEG00000022779	rbm17	100	81.951	ENSPSIG00000012332	RBM17	100	81.951	Pelodiscus_sinensis
ENSAPEG00000022779	rbm17	100	88.366	ENSPMGG00000007980	rbm17	100	88.366	Periophthalmus_magnuspinnatus
ENSAPEG00000022779	rbm17	100	82.439	ENSPEMG00000014320	Rbm17	100	82.439	Peromyscus_maniculatus_bairdii
ENSAPEG00000022779	rbm17	100	82.152	ENSPCIG00000019260	-	100	82.152	Phascolarctos_cinereus
ENSAPEG00000022779	rbm17	100	92.874	ENSPFOG00000013271	rbm17	100	92.874	Poecilia_formosa
ENSAPEG00000022779	rbm17	100	92.399	ENSPLAG00000004455	rbm17	100	92.399	Poecilia_latipinna
ENSAPEG00000022779	rbm17	100	93.564	ENSPMEG00000014864	rbm17	100	93.564	Poecilia_mexicana
ENSAPEG00000022779	rbm17	100	93.112	ENSPREG00000015589	rbm17	100	93.112	Poecilia_reticulata
ENSAPEG00000022779	rbm17	100	82.801	ENSPPYG00000002067	RBM17	100	82.801	Pongo_abelii
ENSAPEG00000022779	rbm17	81	59.146	ENSPPYG00000019042	-	100	59.146	Pongo_abelii
ENSAPEG00000022779	rbm17	99	62.963	ENSPPYG00000019881	-	100	62.222	Pongo_abelii
ENSAPEG00000022779	rbm17	100	75.430	ENSPCAG00000016879	RBM17	100	75.430	Procavia_capensis
ENSAPEG00000022779	rbm17	100	83.047	ENSPCOG00000027881	RBM17	100	83.047	Propithecus_coquereli
ENSAPEG00000022779	rbm17	100	74.447	ENSPVAG00000015499	RBM17	100	73.464	Pteropus_vampyrus
ENSAPEG00000022779	rbm17	100	84.750	ENSPNYG00000015274	rbm17	100	85.250	Pundamilia_nyererei
ENSAPEG00000022779	rbm17	100	84.161	ENSPNAG00000030046	rbm17	100	85.579	Pygocentrus_nattereri
ENSAPEG00000022779	rbm17	100	82.439	ENSRNOG00000018767	Rbm17	100	82.439	Rattus_norvegicus
ENSAPEG00000022779	rbm17	100	82.801	ENSRBIG00000043727	RBM17	97	87.500	Rhinopithecus_bieti
ENSAPEG00000022779	rbm17	100	82.801	ENSRROG00000044142	RBM17	97	87.500	Rhinopithecus_roxellana
ENSAPEG00000022779	rbm17	100	73.710	ENSSBOG00000023653	-	100	72.236	Saimiri_boliviensis_boliviensis
ENSAPEG00000022779	rbm17	100	83.047	ENSSBOG00000031661	-	100	83.047	Saimiri_boliviensis_boliviensis
ENSAPEG00000022779	rbm17	100	82.555	ENSSHAG00000012480	-	100	82.555	Sarcophilus_harrisii
ENSAPEG00000022779	rbm17	100	83.619	ENSSFOG00015009892	rbm17	100	85.086	Scleropages_formosus
ENSAPEG00000022779	rbm17	100	89.583	ENSSMAG00000012368	rbm17	100	89.583	Scophthalmus_maximus
ENSAPEG00000022779	rbm17	100	95.388	ENSSDUG00000015015	rbm17	100	95.388	Seriola_dumerili
ENSAPEG00000022779	rbm17	100	95.388	ENSSLDG00000014486	rbm17	100	95.388	Seriola_lalandi_dorsalis
ENSAPEG00000022779	rbm17	99	83.251	ENSSPUG00000001036	RBM17	99	83.251	Sphenodon_punctatus
ENSAPEG00000022779	rbm17	100	98.515	ENSSPAG00000002338	rbm17	100	98.515	Stegastes_partitus
ENSAPEG00000022779	rbm17	100	82.801	ENSSSCG00000011134	RBM17	100	82.801	Sus_scrofa
ENSAPEG00000022779	rbm17	100	82.195	ENSTGUG00000002013	RBM17	100	82.195	Taeniopygia_guttata
ENSAPEG00000022779	rbm17	100	92.327	ENSTRUG00000010698	rbm17	100	92.327	Takifugu_rubripes
ENSAPEG00000022779	rbm17	100	91.133	ENSTNIG00000006892	rbm17	100	91.133	Tetraodon_nigroviridis
ENSAPEG00000022779	rbm17	100	64.198	ENSTBEG00000014686	RBM17	100	64.198	Tupaia_belangeri
ENSAPEG00000022779	rbm17	90	82.240	ENSTTRG00000001344	RBM17	100	82.240	Tursiops_truncatus
ENSAPEG00000022779	rbm17	100	79.302	ENSUAMG00000009499	RBM17	100	79.302	Ursus_americanus
ENSAPEG00000022779	rbm17	100	83.047	ENSUMAG00000012237	RBM17	100	83.047	Ursus_maritimus
ENSAPEG00000022779	rbm17	100	71.990	ENSVPAG00000005497	RBM17	86	89.630	Vicugna_pacos
ENSAPEG00000022779	rbm17	100	79.551	ENSVVUG00000006780	RBM17	100	79.551	Vulpes_vulpes
ENSAPEG00000022779	rbm17	99	78.960	ENSXETG00000018123	rbm17	100	78.713	Xenopus_tropicalis
ENSAPEG00000022779	rbm17	100	93.812	ENSXMAG00000008674	rbm17	100	93.812	Xiphophorus_maculatus