EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000022949 (Gene tree)
Gene ID: -
Gene Symbol: smg5
Alias: zgc:113841
Full Name: SMG5 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 22427 bases
Position: chr7:13128024-13150450
Accession: ZDB-GENE-050913-144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000032364	EST1	PF10374.9	2.2e-24	1	1
ENSAPEP00000032401	EST1	PF10374.9	3.6e-24	1	1
ENSAPEP00000032401	EST1_DNA_bind	PF10373.9	1.2e-40	1	1
ENSAPEP00000032364	EST1_DNA_bind	PF10373.9	3.1e-40	1	1
ENSAPEP00000032401	PIN_4	PF13638.6	5.3e-07	1	1
ENSAPEP00000032364	PIN_4	PF13638.6	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000033223	-	5248	-	ENSAPEP00000032364	1123 (aa)	-	-
ENSAPET00000033260	-	2985	-	ENSAPEP00000032401	994 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000022949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022949	smg5	98	66.335	ENSG00000198952	SMG5	98	66.501	Homo_sapiens
ENSAPEG00000022949	smg5	100	98.403	ENSAPOG00000019690	smg5	100	98.403	Acanthochromis_polyacanthus
ENSAPEG00000022949	smg5	98	65.308	ENSAMEG00000014458	SMG5	100	65.010	Ailuropoda_melanoleuca
ENSAPEG00000022949	smg5	98	89.066	ENSACIG00000001353	smg5	98	89.662	Amphilophus_citrinellus
ENSAPEG00000022949	smg5	100	99.822	ENSAOCG00000019483	smg5	100	99.822	Amphiprion_ocellaris
ENSAPEG00000022949	smg5	100	92.806	ENSATEG00000005348	smg5	100	92.629	Anabas_testudineus
ENSAPEG00000022949	smg5	98	65.667	ENSAPLG00000010263	SMG5	100	65.184	Anas_platyrhynchos
ENSAPEG00000022949	smg5	93	77.830	ENSANAG00000032899	SMG5	99	66.010	Aotus_nancymaae
ENSAPEG00000022949	smg5	100	92.021	ENSACLG00000009311	smg5	100	91.401	Astatotilapia_calliptera
ENSAPEG00000022949	smg5	100	79.359	ENSAMXG00000024616	smg5	100	79.717	Astyanax_mexicanus
ENSAPEG00000022949	smg5	98	40.719	ENSBTAG00000021747	-	95	47.778	Bos_taurus
ENSAPEG00000022949	smg5	98	66.866	ENSBTAG00000009435	SMG5	98	66.171	Bos_taurus
ENSAPEG00000022949	smg5	93	77.830	ENSCJAG00000005684	SMG5	98	65.941	Callithrix_jacchus
ENSAPEG00000022949	smg5	98	66.199	ENSCAFG00000016839	SMG5	98	66.434	Canis_familiaris
ENSAPEG00000022949	smg5	98	66.199	ENSCAFG00020006061	SMG5	98	66.434	Canis_lupus_dingo
ENSAPEG00000022949	smg5	93	78.404	ENSCHIG00000007709	SMG5	98	66.270	Capra_hircus
ENSAPEG00000022949	smg5	98	39.307	ENSCHIG00000006323	-	97	48.198	Capra_hircus
ENSAPEG00000022949	smg5	98	66.800	ENSTSYG00000004099	SMG5	98	66.501	Carlito_syrichta
ENSAPEG00000022949	smg5	83	79.167	ENSCAPG00000003631	SMG5	100	51.699	Cavia_aperea
ENSAPEG00000022949	smg5	98	66.368	ENSCPOG00000015696	SMG5	98	66.567	Cavia_porcellus
ENSAPEG00000022949	smg5	93	77.830	ENSCCAG00000027409	SMG5	99	65.813	Cebus_capucinus
ENSAPEG00000022949	smg5	98	66.434	ENSCATG00000030539	SMG5	98	66.600	Cercocebus_atys
ENSAPEG00000022949	smg5	98	66.239	ENSCLAG00000003983	SMG5	98	66.269	Chinchilla_lanigera
ENSAPEG00000022949	smg5	98	66.434	ENSCSAG00000002120	SMG5	98	66.600	Chlorocebus_sabaeus
ENSAPEG00000022949	smg5	54	75.812	ENSCHOG00000008741	-	57	75.812	Choloepus_hoffmanni
ENSAPEG00000022949	smg5	94	65.462	ENSCPBG00000025848	SMG5	100	64.724	Chrysemys_picta_bellii
ENSAPEG00000022949	smg5	92	32.842	ENSCING00000008706	-	97	31.153	Ciona_intestinalis
ENSAPEG00000022949	smg5	98	63.845	ENSCANG00000029208	SMG5	98	64.016	Colobus_angolensis_palliatus
ENSAPEG00000022949	smg5	98	66.600	ENSCGRG00001006336	Smg5	98	66.335	Cricetulus_griseus_chok1gshd
ENSAPEG00000022949	smg5	91	77.363	ENSCGRG00000005111	Smg5	100	66.401	Cricetulus_griseus_crigri
ENSAPEG00000022949	smg5	100	87.111	ENSCSEG00000014220	smg5	100	86.756	Cynoglossus_semilaevis
ENSAPEG00000022949	smg5	98	82.041	ENSCVAG00000000529	smg5	97	81.735	Cyprinodon_variegatus
ENSAPEG00000022949	smg5	100	77.935	ENSDARG00000041481	smg5	100	78.288	Danio_rerio
ENSAPEG00000022949	smg5	92	33.191	ENSDNOG00000039862	-	88	39.560	Dasypus_novemcinctus
ENSAPEG00000022949	smg5	88	78.249	ENSDNOG00000000051	SMG5	98	63.158	Dasypus_novemcinctus
ENSAPEG00000022949	smg5	98	66.036	ENSDORG00000010382	Smg5	98	66.006	Dipodomys_ordii
ENSAPEG00000022949	smg5	59	30.890	FBgn0019890	Smg5	50	30.890	Drosophila_melanogaster
ENSAPEG00000022949	smg5	75	85.437	ENSETEG00000010336	SMG5	81	85.437	Echinops_telfairi
ENSAPEG00000022949	smg5	91	46.531	ENSEBUG00000003739	smg5	98	46.023	Eptatretus_burgeri
ENSAPEG00000022949	smg5	98	66.833	ENSEASG00005019122	SMG5	98	66.168	Equus_asinus_asinus
ENSAPEG00000022949	smg5	98	66.733	ENSECAG00000001389	SMG5	98	66.367	Equus_caballus
ENSAPEG00000022949	smg5	74	78.814	ENSEEUG00000012690	SMG5	75	78.814	Erinaceus_europaeus
ENSAPEG00000022949	smg5	100	82.817	ENSELUG00000012585	smg5	100	82.004	Esox_lucius
ENSAPEG00000022949	smg5	98	65.900	ENSFCAG00000011783	SMG5	98	66.000	Felis_catus
ENSAPEG00000022949	smg5	57	69.573	ENSFALG00000001166	-	95	68.889	Ficedula_albicollis
ENSAPEG00000022949	smg5	98	65.842	ENSFDAG00000017388	SMG5	100	66.434	Fukomys_damarensis
ENSAPEG00000022949	smg5	98	78.733	ENSFHEG00000013939	smg5	94	91.429	Fundulus_heteroclitus
ENSAPEG00000022949	smg5	100	78.865	ENSGMOG00000007310	smg5	100	79.494	Gadus_morhua
ENSAPEG00000022949	smg5	99	66.285	ENSGALG00000029918	-	99	65.616	Gallus_gallus
ENSAPEG00000022949	smg5	93	91.054	ENSGAFG00000021691	smg5	99	91.054	Gambusia_affinis
ENSAPEG00000022949	smg5	100	88.053	ENSGACG00000013142	smg5	100	87.434	Gasterosteus_aculeatus
ENSAPEG00000022949	smg5	99	65.687	ENSGAGG00000016131	SMG5	99	64.672	Gopherus_agassizii
ENSAPEG00000022949	smg5	98	66.135	ENSGGOG00000010932	SMG5	98	66.402	Gorilla_gorilla
ENSAPEG00000022949	smg5	100	91.837	ENSHBUG00000008654	smg5	100	91.748	Haplochromis_burtoni
ENSAPEG00000022949	smg5	98	65.217	ENSHGLG00000019152	SMG5	98	65.507	Heterocephalus_glaber_female
ENSAPEG00000022949	smg5	88	65.827	ENSHGLG00100015948	SMG5	97	66.152	Heterocephalus_glaber_male
ENSAPEG00000022949	smg5	86	78.271	ENSHCOG00000010229	smg5	94	83.213	Hippocampus_comes
ENSAPEG00000022949	smg5	100	78.042	ENSIPUG00000006624	Smg5	100	78.004	Ictalurus_punctatus
ENSAPEG00000022949	smg5	98	66.567	ENSSTOG00000001780	SMG5	98	66.040	Ictidomys_tridecemlineatus
ENSAPEG00000022949	smg5	98	66.302	ENSJJAG00000022763	Smg5	98	66.206	Jaculus_jaculus
ENSAPEG00000022949	smg5	100	91.281	ENSKMAG00000014586	smg5	100	91.637	Kryptolebias_marmoratus
ENSAPEG00000022949	smg5	100	92.520	ENSLBEG00000002145	smg5	100	92.876	Labrus_bergylta
ENSAPEG00000022949	smg5	97	60.174	ENSLACG00000010521	SMG5	97	60.840	Latimeria_chalumnae
ENSAPEG00000022949	smg5	95	87.160	ENSLOCG00000008380	smg5	99	71.757	Lepisosteus_oculatus
ENSAPEG00000022949	smg5	98	66.866	ENSLAFG00000006241	SMG5	98	66.567	Loxodonta_africana
ENSAPEG00000022949	smg5	98	66.434	ENSMFAG00000045357	SMG5	98	66.600	Macaca_fascicularis
ENSAPEG00000022949	smg5	93	78.066	ENSMMUG00000000090	SMG5	98	67.205	Macaca_mulatta
ENSAPEG00000022949	smg5	98	66.335	ENSMNEG00000044425	SMG5	98	66.501	Macaca_nemestrina
ENSAPEG00000022949	smg5	93	68.160	ENSMLEG00000041192	SMG5	98	61.089	Mandrillus_leucophaeus
ENSAPEG00000022949	smg5	100	92.444	ENSMAMG00000010683	smg5	100	92.800	Mastacembelus_armatus
ENSAPEG00000022949	smg5	61	84.579	ENSMZEG00005016543	smg5	100	85.358	Maylandia_zebra
ENSAPEG00000022949	smg5	98	85.400	ENSMZEG00005015815	smg5	98	85.800	Maylandia_zebra
ENSAPEG00000022949	smg5	55	43.563	ENSMAUG00000000043	-	75	48.736	Mesocricetus_auratus
ENSAPEG00000022949	smg5	98	66.335	ENSMAUG00000010381	Smg5	98	66.335	Mesocricetus_auratus
ENSAPEG00000022949	smg5	98	66.201	ENSMICG00000002257	SMG5	98	65.907	Microcebus_murinus
ENSAPEG00000022949	smg5	52	44.742	ENSMOCG00000008423	-	68	51.238	Microtus_ochrogaster
ENSAPEG00000022949	smg5	99	65.818	ENSMOCG00000016590	Smg5	99	65.460	Microtus_ochrogaster
ENSAPEG00000022949	smg5	100	86.525	ENSMMOG00000017199	smg5	100	87.234	Mola_mola
ENSAPEG00000022949	smg5	86	34.101	ENSMODG00000004511	-	81	34.465	Monodelphis_domestica
ENSAPEG00000022949	smg5	79	35.677	ENSMODG00000004532	-	91	33.850	Monodelphis_domestica
ENSAPEG00000022949	smg5	77	35.040	ENSMODG00000004735	-	86	35.135	Monodelphis_domestica
ENSAPEG00000022949	smg5	85	66.743	ENSMODG00000016901	SMG5	96	66.629	Monodelphis_domestica
ENSAPEG00000022949	smg5	79	33.846	ENSMODG00000010675	-	90	34.103	Monodelphis_domestica
ENSAPEG00000022949	smg5	100	90.569	ENSMALG00000010375	smg5	100	90.036	Monopterus_albus
ENSAPEG00000022949	smg5	98	66.335	MGP_CAROLIEiJ_G0025163	Smg5	100	88.268	Mus_caroli
ENSAPEG00000022949	smg5	98	66.135	ENSMUSG00000001415	Smg5	99	88.268	Mus_musculus
ENSAPEG00000022949	smg5	98	66.302	MGP_PahariEiJ_G0026606	Smg5	100	88.827	Mus_pahari
ENSAPEG00000022949	smg5	98	66.135	MGP_SPRETEiJ_G0026104	Smg5	100	88.268	Mus_spretus
ENSAPEG00000022949	smg5	94	64.651	ENSMPUG00000004546	SMG5	93	74.734	Mustela_putorius_furo
ENSAPEG00000022949	smg5	98	66.899	ENSMLUG00000008518	SMG5	98	66.633	Myotis_lucifugus
ENSAPEG00000022949	smg5	99	65.759	ENSNGAG00000020706	Smg5	99	65.019	Nannospalax_galili
ENSAPEG00000022949	smg5	98	39.354	ENSNGAG00000012101	-	97	39.139	Nannospalax_galili
ENSAPEG00000022949	smg5	95	85.458	ENSNBRG00000004332	smg5	95	85.911	Neolamprologus_brichardi
ENSAPEG00000022949	smg5	98	66.335	ENSNLEG00000012439	SMG5	98	66.501	Nomascus_leucogenys
ENSAPEG00000022949	smg5	98	65.669	ENSMEUG00000012834	SMG5	98	65.669	Notamacropus_eugenii
ENSAPEG00000022949	smg5	98	66.335	ENSOPRG00000009152	SMG5	98	65.743	Ochotona_princeps
ENSAPEG00000022949	smg5	98	66.368	ENSODEG00000012237	SMG5	98	66.534	Octodon_degus
ENSAPEG00000022949	smg5	100	91.563	ENSONIG00000008632	smg5	100	91.652	Oreochromis_niloticus
ENSAPEG00000022949	smg5	88	37.303	ENSOCUG00000023338	-	90	43.548	Oryctolagus_cuniculus
ENSAPEG00000022949	smg5	98	66.534	ENSOCUG00000012886	SMG5	100	66.135	Oryctolagus_cuniculus
ENSAPEG00000022949	smg5	100	86.210	ENSORLG00000016239	smg5	100	87.100	Oryzias_latipes
ENSAPEG00000022949	smg5	100	86.400	ENSORLG00020013127	smg5	100	86.833	Oryzias_latipes_hni
ENSAPEG00000022949	smg5	100	86.032	ENSORLG00015019014	smg5	100	86.833	Oryzias_latipes_hsok
ENSAPEG00000022949	smg5	84	85.896	ENSOMEG00000021330	smg5	92	86.561	Oryzias_melastigma
ENSAPEG00000022949	smg5	99	64.804	ENSOGAG00000004966	SMG5	99	65.137	Otolemur_garnettii
ENSAPEG00000022949	smg5	93	78.404	ENSOARG00000005778	SMG5	98	66.171	Ovis_aries
ENSAPEG00000022949	smg5	98	39.664	ENSOARG00000011963	-	97	48.124	Ovis_aries
ENSAPEG00000022949	smg5	98	66.235	ENSPPAG00000011996	SMG5	98	66.269	Pan_paniscus
ENSAPEG00000022949	smg5	98	66.034	ENSPPRG00000011901	SMG5	100	66.500	Panthera_pardus
ENSAPEG00000022949	smg5	99	62.387	ENSPTIG00000007892	SMG5	100	61.577	Panthera_tigris_altaica
ENSAPEG00000022949	smg5	98	66.235	ENSPTRG00000049282	-	98	66.269	Pan_troglodytes
ENSAPEG00000022949	smg5	98	66.235	ENSPTRG00000023925	SMG5	98	66.269	Pan_troglodytes
ENSAPEG00000022949	smg5	98	66.434	ENSPANG00000011201	SMG5	98	66.600	Papio_anubis
ENSAPEG00000022949	smg5	100	76.502	ENSPKIG00000009402	smg5	100	77.176	Paramormyrops_kingsleyae
ENSAPEG00000022949	smg5	98	67.060	ENSPSIG00000015198	SMG5	100	66.765	Pelodiscus_sinensis
ENSAPEG00000022949	smg5	100	73.227	ENSPMGG00000010465	smg5	100	72.631	Periophthalmus_magnuspinnatus
ENSAPEG00000022949	smg5	98	66.633	ENSPEMG00000001819	Smg5	98	66.235	Peromyscus_maniculatus_bairdii
ENSAPEG00000022949	smg5	56	40.582	ENSPEMG00000010022	-	68	50.248	Peromyscus_maniculatus_bairdii
ENSAPEG00000022949	smg5	98	48.976	ENSPMAG00000000410	smg5	91	62.654	Petromyzon_marinus
ENSAPEG00000022949	smg5	99	65.856	ENSPCIG00000018938	SMG5	99	65.625	Phascolarctos_cinereus
ENSAPEG00000022949	smg5	100	88.780	ENSPFOG00000010191	smg5	100	88.513	Poecilia_formosa
ENSAPEG00000022949	smg5	100	88.691	ENSPLAG00000009332	smg5	100	88.691	Poecilia_latipinna
ENSAPEG00000022949	smg5	100	88.869	ENSPMEG00000014105	smg5	100	88.602	Poecilia_mexicana
ENSAPEG00000022949	smg5	100	89.047	ENSPREG00000017713	smg5	100	89.225	Poecilia_reticulata
ENSAPEG00000022949	smg5	98	66.335	ENSPPYG00000000723	SMG5	98	66.501	Pongo_abelii
ENSAPEG00000022949	smg5	77	80.556	ENSPCAG00000008412	SMG5	75	88.268	Procavia_capensis
ENSAPEG00000022949	smg5	93	78.622	ENSPCOG00000004741	SMG5	98	66.139	Propithecus_coquereli
ENSAPEG00000022949	smg5	93	65.330	ENSPVAG00000016748	SMG5	98	59.422	Pteropus_vampyrus
ENSAPEG00000022949	smg5	100	91.512	ENSPNYG00000013397	smg5	100	91.247	Pundamilia_nyererei
ENSAPEG00000022949	smg5	100	78.933	ENSPNAG00000028363	smg5	100	79.556	Pygocentrus_nattereri
ENSAPEG00000022949	smg5	98	66.169	ENSRNOG00000019590	Smg5	98	65.936	Rattus_norvegicus
ENSAPEG00000022949	smg5	98	66.335	ENSRBIG00000027428	SMG5	98	66.006	Rhinopithecus_bieti
ENSAPEG00000022949	smg5	98	66.235	ENSRROG00000030035	SMG5	98	65.907	Rhinopithecus_roxellana
ENSAPEG00000022949	smg5	93	78.066	ENSSBOG00000033339	SMG5	98	65.941	Saimiri_boliviensis_boliviensis
ENSAPEG00000022949	smg5	98	66.139	ENSSHAG00000014163	SMG5	100	66.040	Sarcophilus_harrisii
ENSAPEG00000022949	smg5	97	31.725	ENSSHAG00000009572	-	87	37.810	Sarcophilus_harrisii
ENSAPEG00000022949	smg5	64	33.682	ENSSHAG00000000935	-	84	35.529	Sarcophilus_harrisii
ENSAPEG00000022949	smg5	81	35.253	ENSSHAG00000000561	-	90	35.253	Sarcophilus_harrisii
ENSAPEG00000022949	smg5	98	80.238	ENSSFOG00015024175	smg5	98	80.179	Scleropages_formosus
ENSAPEG00000022949	smg5	100	92.794	ENSSMAG00000013059	smg5	100	93.060	Scophthalmus_maximus
ENSAPEG00000022949	smg5	100	94.336	ENSSDUG00000007122	smg5	100	94.690	Seriola_dumerili
ENSAPEG00000022949	smg5	100	94.405	ENSSLDG00000011418	smg5	100	94.760	Seriola_lalandi_dorsalis
ENSAPEG00000022949	smg5	88	58.693	ENSSARG00000012484	SMG5	94	70.504	Sorex_araneus
ENSAPEG00000022949	smg5	94	64.841	ENSSPUG00000002260	SMG5	100	65.335	Sphenodon_punctatus
ENSAPEG00000022949	smg5	100	95.833	ENSSPAG00000014266	smg5	100	95.745	Stegastes_partitus
ENSAPEG00000022949	smg5	91	60.000	ENSSSCG00000039308	-	96	53.008	Sus_scrofa
ENSAPEG00000022949	smg5	98	66.833	ENSSSCG00000006490	-	100	65.702	Sus_scrofa
ENSAPEG00000022949	smg5	98	67.557	ENSTGUG00000003748	-	99	66.407	Taeniopygia_guttata
ENSAPEG00000022949	smg5	100	82.566	ENSTRUG00000012580	smg5	100	82.920	Takifugu_rubripes
ENSAPEG00000022949	smg5	100	82.099	ENSTNIG00000010303	smg5	100	82.099	Tetraodon_nigroviridis
ENSAPEG00000022949	smg5	59	84.236	ENSTBEG00000002777	SMG5	58	84.236	Tupaia_belangeri
ENSAPEG00000022949	smg5	95	64.536	ENSTTRG00000001401	SMG5	94	64.536	Tursiops_truncatus
ENSAPEG00000022949	smg5	92	76.429	ENSUAMG00000013721	SMG5	93	75.171	Ursus_americanus
ENSAPEG00000022949	smg5	91	74.568	ENSUMAG00000018041	SMG5	95	72.960	Ursus_maritimus
ENSAPEG00000022949	smg5	91	72.277	ENSVPAG00000009446	SMG5	99	58.234	Vicugna_pacos
ENSAPEG00000022949	smg5	98	66.232	ENSVVUG00000005887	SMG5	98	66.032	Vulpes_vulpes
ENSAPEG00000022949	smg5	76	57.302	ENSXETG00000033791	SMG5	95	58.648	Xenopus_tropicalis
ENSAPEG00000022949	smg5	92	91.892	ENSXCOG00000004379	smg5	100	91.892	Xiphophorus_couchianus
ENSAPEG00000022949	smg5	100	87.979	ENSXMAG00000013499	smg5	100	88.246	Xiphophorus_maculatus