EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000022956 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 68441 bases
Position: chr16:35802403-35870843
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000032302	Ribosomal_S18	PF01084.20	2.2e-22	1	1
ENSAPEP00000032308	Ribosomal_S18	PF01084.20	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000033161	-	1617	-	ENSAPEP00000032302	129 (aa)	-	-
ENSAPET00000033167	-	1577	-	ENSAPEP00000032308	129 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000022956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000022956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000022956	mrps18c	67	100.000	ENSAPEG00000023068	-	87	95.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000022956	mrps18c	100	90.698	ENSAPOG00000019045	mrps18c	100	90.698	Acanthochromis_polyacanthus
ENSAPEG00000022956	mrps18c	71	82.609	ENSACIG00000020253	mrps18c	91	82.609	Amphilophus_citrinellus
ENSAPEG00000022956	mrps18c	100	98.450	ENSAOCG00000014338	mrps18c	100	98.450	Amphiprion_ocellaris
ENSAPEG00000022956	mrps18c	100	72.308	ENSATEG00000023417	mrps18c	100	72.308	Anabas_testudineus
ENSAPEG00000022956	mrps18c	68	70.455	ENSAPLG00000012544	-	85	70.455	Anas_platyrhynchos
ENSAPEG00000022956	mrps18c	72	90.323	ENSACLG00000010521	mrps18c	91	90.323	Astatotilapia_calliptera
ENSAPEG00000022956	mrps18c	71	74.725	ENSAMXG00000012238	mrps18c	92	74.725	Astyanax_mexicanus
ENSAPEG00000022956	mrps18c	93	57.724	ENSCPBG00000007783	-	75	57.724	Chrysemys_picta_bellii
ENSAPEG00000022956	mrps18c	84	69.725	ENSCSEG00000000711	mrps18c	91	60.606	Cynoglossus_semilaevis
ENSAPEG00000022956	mrps18c	100	65.891	ENSCVAG00000020169	mrps18c	100	65.891	Cyprinodon_variegatus
ENSAPEG00000022956	mrps18c	72	70.968	ENSDARG00000069624	mrps18c	68	70.968	Danio_rerio
ENSAPEG00000022956	mrps18c	100	57.895	ENSELUG00000024603	mrps18c	100	57.895	Esox_lucius
ENSAPEG00000022956	mrps18c	100	63.566	ENSFHEG00000018752	-	100	63.566	Fundulus_heteroclitus
ENSAPEG00000022956	mrps18c	100	63.566	ENSFHEG00000015550	mrps18c	95	63.566	Fundulus_heteroclitus
ENSAPEG00000022956	mrps18c	74	62.500	ENSGALG00000023191	MRPS18C	67	62.500	Gallus_gallus
ENSAPEG00000022956	mrps18c	100	61.240	ENSGAFG00000008048	mrps18c	83	61.240	Gambusia_affinis
ENSAPEG00000022956	mrps18c	81	62.963	ENSGAGG00000015144	-	76	62.963	Gopherus_agassizii
ENSAPEG00000022956	mrps18c	100	74.615	ENSHBUG00000002008	mrps18c	100	74.615	Haplochromis_burtoni
ENSAPEG00000022956	mrps18c	74	77.083	ENSHCOG00000013161	mrps18c	73	77.083	Hippocampus_comes
ENSAPEG00000022956	mrps18c	71	73.626	ENSIPUG00000003783	mrps18c	88	73.626	Ictalurus_punctatus
ENSAPEG00000022956	mrps18c	100	67.692	ENSKMAG00000016467	mrps18c	100	67.692	Kryptolebias_marmoratus
ENSAPEG00000022956	mrps18c	100	70.000	ENSLBEG00000019174	mrps18c	100	70.000	Labrus_bergylta
ENSAPEG00000022956	mrps18c	100	70.000	ENSLBEG00000021861	mrps18c	100	70.000	Labrus_bergylta
ENSAPEG00000022956	mrps18c	80	66.346	ENSLACG00000011243	mrps18c	81	66.346	Latimeria_chalumnae
ENSAPEG00000022956	mrps18c	73	71.277	ENSLOCG00000012115	mrps18c	70	71.277	Lepisosteus_oculatus
ENSAPEG00000022956	mrps18c	100	67.910	ENSMAMG00000012386	mrps18c	100	67.910	Mastacembelus_armatus
ENSAPEG00000022956	mrps18c	100	74.615	ENSMZEG00005023278	mrps18c	100	74.615	Maylandia_zebra
ENSAPEG00000022956	mrps18c	82	81.308	ENSMMOG00000011316	mrps18c	82	81.308	Mola_mola
ENSAPEG00000022956	mrps18c	100	74.615	ENSNBRG00000006182	mrps18c	100	74.615	Neolamprologus_brichardi
ENSAPEG00000022956	mrps18c	68	72.727	ENSMEUG00000010972	-	69	72.727	Notamacropus_eugenii
ENSAPEG00000022956	mrps18c	100	73.846	ENSONIG00000012527	mrps18c	91	89.130	Oreochromis_niloticus
ENSAPEG00000022956	mrps18c	100	68.992	ENSORLG00015006869	mrps18c	100	68.992	Oryzias_latipes_hsok
ENSAPEG00000022956	mrps18c	70	77.778	ENSOMEG00000005009	mrps18c	87	77.778	Oryzias_melastigma
ENSAPEG00000022956	mrps18c	80	70.874	ENSPKIG00000021736	mrps18c	75	70.874	Paramormyrops_kingsleyae
ENSAPEG00000022956	mrps18c	71	85.714	ENSPMGG00000002991	mrps18c	92	85.714	Periophthalmus_magnuspinnatus
ENSAPEG00000022956	mrps18c	100	60.465	ENSPFOG00000002351	mrps18c	83	60.465	Poecilia_formosa
ENSAPEG00000022956	mrps18c	100	60.465	ENSPLAG00000015187	mrps18c	100	60.465	Poecilia_latipinna
ENSAPEG00000022956	mrps18c	100	59.690	ENSPMEG00000014488	mrps18c	83	59.690	Poecilia_mexicana
ENSAPEG00000022956	mrps18c	64	78.313	ENSPREG00000012593	mrps18c	85	78.313	Poecilia_reticulata
ENSAPEG00000022956	mrps18c	100	73.846	ENSPNYG00000010654	mrps18c	100	73.846	Pundamilia_nyererei
ENSAPEG00000022956	mrps18c	77	72.000	ENSPNAG00000009350	mrps18c	93	72.000	Pygocentrus_nattereri
ENSAPEG00000022956	mrps18c	84	69.091	ENSSFOG00015019444	mrps18c	81	69.091	Scleropages_formosus
ENSAPEG00000022956	mrps18c	100	70.000	ENSSDUG00000015676	mrps18c	100	70.000	Seriola_dumerili
ENSAPEG00000022956	mrps18c	87	69.919	ENSSLDG00000002034	mrps18c	94	69.919	Seriola_lalandi_dorsalis
ENSAPEG00000022956	mrps18c	72	67.742	ENSSPUG00000013990	-	68	67.742	Sphenodon_punctatus
ENSAPEG00000022956	mrps18c	99	79.688	ENSSPAG00000008687	mrps18c	99	79.688	Stegastes_partitus
ENSAPEG00000022956	mrps18c	100	65.385	ENSTRUG00000024403	mrps18c	100	65.385	Takifugu_rubripes
ENSAPEG00000022956	mrps18c	100	66.923	ENSTNIG00000005674	mrps18c	100	66.923	Tetraodon_nigroviridis
ENSAPEG00000022956	mrps18c	70	70.000	ENSXETG00000027597	mrps18c	69	70.000	Xenopus_tropicalis
ENSAPEG00000022956	mrps18c	100	62.791	ENSXCOG00000016208	mrps18c	89	78.652	Xiphophorus_couchianus
ENSAPEG00000022956	mrps18c	100	62.016	ENSXMAG00000012555	mrps18c	83	62.016	Xiphophorus_maculatus