EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000023108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 21837 bases
Position: chr3:29614887-29636723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000032616	ResIII	PF04851.15	1.5e-08	1	1
ENSAPEP00000032593	ResIII	PF04851.15	1.7e-08	1	1
ENSAPEP00000032593	BRK	PF07533.16	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000033479	-	4617	-	ENSAPEP00000032616	1538 (aa)	-	-
ENSAPET00000033456	-	9124	-	ENSAPEP00000032593	1680 (aa)	-	UPI000C30D4FF

Gene Model

Click here to download ENSAPEG00000023108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000023108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000023108	-	98	70.852	ENSAPEG00000007646	SMARCA2	96	71.429
ENSAPEG00000023108	-	88	86.071	ENSAPEG00000015559	smarca4a	100	85.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000023108	-	99	83.018	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSAPEG00000023108	-	78	86.360	ENSAPOG00000003509	smarca4a	98	86.433	Acanthochromis_polyacanthus
ENSAPEG00000023108	-	97	99.446	ENSAPOG00000004542	SMARCA4	99	99.446	Acanthochromis_polyacanthus
ENSAPEG00000023108	-	99	80.805	ENSAMEG00000010868	SMARCA4	100	80.586	Ailuropoda_melanoleuca
ENSAPEG00000023108	-	98	83.261	ENSACIG00000021550	smarca4a	98	84.407	Amphilophus_citrinellus
ENSAPEG00000023108	-	96	95.295	ENSACIG00000003035	-	99	95.295	Amphilophus_citrinellus
ENSAPEG00000023108	-	88	86.000	ENSAOCG00000019167	smarca4a	100	85.378	Amphiprion_ocellaris
ENSAPEG00000023108	-	93	94.874	ENSAOCG00000009450	-	97	94.807	Amphiprion_ocellaris
ENSAPEG00000023108	-	99	96.379	ENSATEG00000001094	-	99	96.379	Anabas_testudineus
ENSAPEG00000023108	-	99	84.072	ENSATEG00000011524	smarca4a	98	83.376	Anabas_testudineus
ENSAPEG00000023108	-	99	83.064	ENSANAG00000036991	SMARCA4	100	80.608	Aotus_nancymaae
ENSAPEG00000023108	-	98	84.343	ENSACLG00000000163	smarca4a	98	82.742	Astatotilapia_calliptera
ENSAPEG00000023108	-	97	96.919	ENSACLG00000008638	-	99	96.919	Astatotilapia_calliptera
ENSAPEG00000023108	-	97	86.117	ENSAMXG00000021023	smarca4a	99	85.084	Astyanax_mexicanus
ENSAPEG00000023108	-	93	85.921	ENSAMXG00000011238	-	99	89.139	Astyanax_mexicanus
ENSAPEG00000023108	-	99	82.712	ENSBTAG00000019220	SMARCA4	100	83.175	Bos_taurus
ENSAPEG00000023108	-	97	86.135	ENSCJAG00000005936	SMARCA4	95	86.940	Callithrix_jacchus
ENSAPEG00000023108	-	99	83.195	ENSCAFG00000017584	SMARCA4	100	83.245	Canis_familiaris
ENSAPEG00000023108	-	99	83.195	ENSCAFG00020024620	SMARCA4	99	83.245	Canis_lupus_dingo
ENSAPEG00000023108	-	99	79.337	ENSCHIG00000015318	SMARCA4	100	79.704	Capra_hircus
ENSAPEG00000023108	-	99	83.225	ENSTSYG00000012966	SMARCA4	100	82.474	Carlito_syrichta
ENSAPEG00000023108	-	93	82.167	ENSCAPG00000015932	SMARCA4	99	81.352	Cavia_aperea
ENSAPEG00000023108	-	99	83.623	ENSCPOG00000015549	SMARCA4	100	82.060	Cavia_porcellus
ENSAPEG00000023108	-	99	80.094	ENSCCAG00000031660	SMARCA4	99	80.436	Cebus_capucinus
ENSAPEG00000023108	-	99	83.018	ENSCATG00000029530	SMARCA4	100	83.126	Cercocebus_atys
ENSAPEG00000023108	-	99	82.801	ENSCLAG00000011946	SMARCA4	100	83.067	Chinchilla_lanigera
ENSAPEG00000023108	-	99	82.120	ENSCPBG00000009994	SMARCA4	100	82.889	Chrysemys_picta_bellii
ENSAPEG00000023108	-	99	83.018	ENSCANG00000036013	SMARCA4	100	83.126	Colobus_angolensis_palliatus
ENSAPEG00000023108	-	99	83.235	ENSCGRG00001016732	Smarca4	100	83.067	Cricetulus_griseus_chok1gshd
ENSAPEG00000023108	-	99	83.235	ENSCGRG00000017242	Smarca4	100	83.067	Cricetulus_griseus_crigri
ENSAPEG00000023108	-	96	80.655	ENSCSEG00000014771	smarca4a	100	83.620	Cynoglossus_semilaevis
ENSAPEG00000023108	-	99	88.534	ENSCVAG00000003018	-	99	89.874	Cyprinodon_variegatus
ENSAPEG00000023108	-	98	81.925	ENSCVAG00000006979	smarca4a	99	83.363	Cyprinodon_variegatus
ENSAPEG00000023108	-	97	83.845	ENSDARG00000077226	smarca4a	100	84.748	Danio_rerio
ENSAPEG00000023108	-	92	83.001	ENSDARG00000104339	SMARCA4	95	83.120	Danio_rerio
ENSAPEG00000023108	-	96	81.609	ENSDNOG00000048847	SMARCA4	90	89.722	Dasypus_novemcinctus
ENSAPEG00000023108	-	86	78.345	ENSDORG00000002544	Smarca4	91	78.307	Dipodomys_ordii
ENSAPEG00000023108	-	94	73.756	ENSETEG00000013361	SMARCA4	94	73.400	Echinops_telfairi
ENSAPEG00000023108	-	96	86.761	ENSEASG00005006167	SMARCA4	98	84.107	Equus_asinus_asinus
ENSAPEG00000023108	-	99	83.283	ENSECAG00000008334	SMARCA4	100	81.824	Equus_caballus
ENSAPEG00000023108	-	98	85.035	ENSELUG00000010247	smarca4a	100	83.304	Esox_lucius
ENSAPEG00000023108	-	98	84.045	ENSELUG00000023232	-	96	87.056	Esox_lucius
ENSAPEG00000023108	-	99	83.107	ENSFCAG00000004894	SMARCA4	100	83.156	Felis_catus
ENSAPEG00000023108	-	84	90.207	ENSFALG00000004208	SMARCA4	93	81.047	Ficedula_albicollis
ENSAPEG00000023108	-	92	83.065	ENSFDAG00000012237	SMARCA4	97	82.254	Fukomys_damarensis
ENSAPEG00000023108	-	100	95.417	ENSFHEG00000007902	-	100	95.417	Fundulus_heteroclitus
ENSAPEG00000023108	-	95	81.925	ENSFHEG00000010182	smarca4a	100	82.714	Fundulus_heteroclitus
ENSAPEG00000023108	-	90	85.322	ENSGMOG00000005756	-	91	84.880	Gadus_morhua
ENSAPEG00000023108	-	86	81.710	ENSGMOG00000002649	smarca4a	93	80.712	Gadus_morhua
ENSAPEG00000023108	-	73	80.822	ENSGALG00000047145	SMARCA4	100	81.789	Gallus_gallus
ENSAPEG00000023108	-	99	92.532	ENSGAFG00000008827	-	99	91.397	Gambusia_affinis
ENSAPEG00000023108	-	87	87.278	ENSGAFG00000014900	smarca4a	97	87.406	Gambusia_affinis
ENSAPEG00000023108	-	95	82.280	ENSGACG00000006691	smarca4a	100	82.544	Gasterosteus_aculeatus
ENSAPEG00000023108	-	99	86.853	ENSGACG00000016033	-	100	86.562	Gasterosteus_aculeatus
ENSAPEG00000023108	-	99	82.206	ENSGAGG00000016757	SMARCA4	100	83.096	Gopherus_agassizii
ENSAPEG00000023108	-	99	83.018	ENSGGOG00000009882	SMARCA4	100	83.126	Gorilla_gorilla
ENSAPEG00000023108	-	99	83.613	ENSHBUG00000021172	smarca4a	100	84.232	Haplochromis_burtoni
ENSAPEG00000023108	-	100	96.310	ENSHBUG00000005447	-	100	96.310	Haplochromis_burtoni
ENSAPEG00000023108	-	99	83.284	ENSHGLG00000010519	SMARCA4	100	82.349	Heterocephalus_glaber_female
ENSAPEG00000023108	-	99	82.673	ENSHGLG00100013774	SMARCA4	100	81.512	Heterocephalus_glaber_male
ENSAPEG00000023108	-	94	83.183	ENSHCOG00000009510	smarca4a	96	82.440	Hippocampus_comes
ENSAPEG00000023108	-	98	84.587	ENSIPUG00000016346	-	97	84.749	Ictalurus_punctatus
ENSAPEG00000023108	-	99	84.588	ENSIPUG00000006107	smarca4a	100	84.382	Ictalurus_punctatus
ENSAPEG00000023108	-	99	83.116	ENSSTOG00000007939	SMARCA4	100	82.593	Ictidomys_tridecemlineatus
ENSAPEG00000023108	-	99	82.137	ENSJJAG00000012877	Smarca4	100	82.233	Jaculus_jaculus
ENSAPEG00000023108	-	99	83.648	ENSKMAG00000011931	smarca4a	99	83.522	Kryptolebias_marmoratus
ENSAPEG00000023108	-	100	95.360	ENSKMAG00000019518	-	100	95.241	Kryptolebias_marmoratus
ENSAPEG00000023108	-	95	81.347	ENSLBEG00000017383	smarca4a	97	81.275	Labrus_bergylta
ENSAPEG00000023108	-	96	86.996	ENSLBEG00000020655	-	99	86.846	Labrus_bergylta
ENSAPEG00000023108	-	98	81.113	ENSLOCG00000007820	smarca4a	99	80.509	Lepisosteus_oculatus
ENSAPEG00000023108	-	99	82.999	ENSLAFG00000001433	SMARCA4	100	83.097	Loxodonta_africana
ENSAPEG00000023108	-	99	83.018	ENSMFAG00000032146	SMARCA4	99	83.126	Macaca_fascicularis
ENSAPEG00000023108	-	99	83.223	ENSMMUG00000012042	SMARCA4	99	88.952	Macaca_mulatta
ENSAPEG00000023108	-	99	82.475	ENSMNEG00000028512	SMARCA4	100	82.998	Macaca_nemestrina
ENSAPEG00000023108	-	99	82.604	ENSMLEG00000034976	SMARCA4	100	82.979	Mandrillus_leucophaeus
ENSAPEG00000023108	-	100	97.143	ENSMAMG00000002841	-	100	97.143	Mastacembelus_armatus
ENSAPEG00000023108	-	96	86.711	ENSMAMG00000009256	smarca4a	98	88.633	Mastacembelus_armatus
ENSAPEG00000023108	-	99	83.483	ENSMZEG00005003889	smarca4a	100	84.104	Maylandia_zebra
ENSAPEG00000023108	-	97	96.365	ENSMZEG00005023861	-	99	96.365	Maylandia_zebra
ENSAPEG00000023108	-	99	83.323	ENSMAUG00000020731	Smarca4	100	83.038	Mesocricetus_auratus
ENSAPEG00000023108	-	99	83.048	ENSMICG00000009806	SMARCA4	100	83.097	Microcebus_murinus
ENSAPEG00000023108	-	99	82.850	ENSMOCG00000022209	Smarca4	100	82.801	Microtus_ochrogaster
ENSAPEG00000023108	-	95	80.320	ENSMMOG00000007571	smarca4a	98	82.812	Mola_mola
ENSAPEG00000023108	-	99	95.452	ENSMMOG00000008466	-	99	95.452	Mola_mola
ENSAPEG00000023108	-	99	82.718	ENSMODG00000006287	SMARCA4	99	85.544	Monodelphis_domestica
ENSAPEG00000023108	-	88	91.714	ENSMALG00000021534	-	99	91.960	Monopterus_albus
ENSAPEG00000023108	-	95	83.126	ENSMALG00000003388	smarca4a	98	83.260	Monopterus_albus
ENSAPEG00000023108	-	99	83.116	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.635	Mus_caroli
ENSAPEG00000023108	-	99	83.116	ENSMUSG00000032187	Smarca4	99	86.635	Mus_musculus
ENSAPEG00000023108	-	99	83.225	MGP_PahariEiJ_G0014745	Smarca4	100	86.625	Mus_pahari
ENSAPEG00000023108	-	99	83.116	MGP_SPRETEiJ_G0033003	Smarca4	100	86.635	Mus_spretus
ENSAPEG00000023108	-	99	83.136	ENSMPUG00000005711	SMARCA4	100	83.185	Mustela_putorius_furo
ENSAPEG00000023108	-	99	83.353	ENSMLUG00000004491	-	100	83.185	Myotis_lucifugus
ENSAPEG00000023108	-	99	82.329	ENSNGAG00000021852	Smarca4	100	82.938	Nannospalax_galili
ENSAPEG00000023108	-	88	94.265	ENSNBRG00000018865	-	99	94.265	Neolamprologus_brichardi
ENSAPEG00000023108	-	94	86.059	ENSNBRG00000011457	smarca4a	96	85.925	Neolamprologus_brichardi
ENSAPEG00000023108	-	93	84.377	ENSNLEG00000012389	SMARCA4	95	84.156	Nomascus_leucogenys
ENSAPEG00000023108	-	77	93.103	ENSOPRG00000000885	-	76	93.103	Ochotona_princeps
ENSAPEG00000023108	-	98	83.638	ENSODEG00000017127	SMARCA4	99	82.881	Octodon_degus
ENSAPEG00000023108	-	99	96.426	ENSONIG00000018040	-	100	96.426	Oreochromis_niloticus
ENSAPEG00000023108	-	99	83.474	ENSONIG00000008196	smarca4a	100	84.095	Oreochromis_niloticus
ENSAPEG00000023108	-	98	77.731	ENSOCUG00000001787	SMARCA4	98	77.374	Oryctolagus_cuniculus
ENSAPEG00000023108	-	97	93.738	ENSORLG00000003955	-	100	93.409	Oryzias_latipes
ENSAPEG00000023108	-	97	81.497	ENSORLG00000015452	smarca4a	100	83.047	Oryzias_latipes
ENSAPEG00000023108	-	97	81.071	ENSORLG00020004611	smarca4a	99	84.014	Oryzias_latipes_hni
ENSAPEG00000023108	-	97	93.742	ENSORLG00020009728	-	100	93.472	Oryzias_latipes_hni
ENSAPEG00000023108	-	97	81.010	ENSORLG00015016560	smarca4a	99	81.059	Oryzias_latipes_hsok
ENSAPEG00000023108	-	100	92.993	ENSORLG00015007739	-	100	93.112	Oryzias_latipes_hsok
ENSAPEG00000023108	-	97	94.165	ENSOMEG00000016626	-	100	93.939	Oryzias_melastigma
ENSAPEG00000023108	-	98	82.969	ENSOMEG00000007486	smarca4a	99	81.472	Oryzias_melastigma
ENSAPEG00000023108	-	90	82.039	ENSOGAG00000016148	SMARCA4	100	82.334	Otolemur_garnettii
ENSAPEG00000023108	-	99	82.120	ENSOARG00000017454	SMARCA4	99	82.201	Ovis_aries
ENSAPEG00000023108	-	99	83.018	ENSPPAG00000043191	SMARCA4	100	83.126	Pan_paniscus
ENSAPEG00000023108	-	99	83.107	ENSPPRG00000000064	SMARCA4	100	83.156	Panthera_pardus
ENSAPEG00000023108	-	93	85.650	ENSPTIG00000017447	SMARCA4	100	78.588	Panthera_tigris_altaica
ENSAPEG00000023108	-	99	83.018	ENSPTRG00000010488	SMARCA4	100	83.126	Pan_troglodytes
ENSAPEG00000023108	-	99	82.593	ENSPANG00000011042	SMARCA4	99	83.116	Papio_anubis
ENSAPEG00000023108	-	95	85.125	ENSPKIG00000010087	-	93	88.780	Paramormyrops_kingsleyae
ENSAPEG00000023108	-	98	87.639	ENSPKIG00000007770	SMARCA4	98	87.025	Paramormyrops_kingsleyae
ENSAPEG00000023108	-	83	84.907	ENSPSIG00000005547	SMARCA4	99	78.465	Pelodiscus_sinensis
ENSAPEG00000023108	-	99	83.028	ENSPEMG00000020389	Smarca4	100	82.861	Peromyscus_maniculatus_bairdii
ENSAPEG00000023108	-	99	83.353	ENSPCIG00000017138	SMARCA4	100	83.225	Phascolarctos_cinereus
ENSAPEG00000023108	-	99	81.947	ENSPFOG00000007892	smarca4a	100	82.409	Poecilia_formosa
ENSAPEG00000023108	-	100	94.405	ENSPFOG00000012930	-	100	94.706	Poecilia_formosa
ENSAPEG00000023108	-	98	83.594	ENSPLAG00000014294	smarca4a	99	83.842	Poecilia_latipinna
ENSAPEG00000023108	-	88	96.854	ENSPLAG00000018616	-	99	91.981	Poecilia_latipinna
ENSAPEG00000023108	-	97	94.704	ENSPMEG00000008929	-	99	92.018	Poecilia_mexicana
ENSAPEG00000023108	-	95	83.147	ENSPMEG00000003725	smarca4a	99	81.246	Poecilia_mexicana
ENSAPEG00000023108	-	99	93.203	ENSPREG00000014823	-	99	93.399	Poecilia_reticulata
ENSAPEG00000023108	-	98	80.772	ENSPREG00000014608	smarca4a	100	82.263	Poecilia_reticulata
ENSAPEG00000023108	-	99	82.185	ENSPPYG00000009568	SMARCA4	100	82.116	Pongo_abelii
ENSAPEG00000023108	-	79	82.781	ENSPCAG00000014054	SMARCA4	77	83.444	Procavia_capensis
ENSAPEG00000023108	-	99	83.481	ENSPCOG00000023011	SMARCA4	100	82.979	Propithecus_coquereli
ENSAPEG00000023108	-	78	93.333	ENSPVAG00000007787	SMARCA4	96	74.952	Pteropus_vampyrus
ENSAPEG00000023108	-	98	86.057	ENSPNYG00000000717	smarca4a	95	85.668	Pundamilia_nyererei
ENSAPEG00000023108	-	96	95.213	ENSPNYG00000023995	-	99	95.213	Pundamilia_nyererei
ENSAPEG00000023108	-	97	85.072	ENSPNAG00000024136	smarca4a	98	84.546	Pygocentrus_nattereri
ENSAPEG00000023108	-	95	87.040	ENSPNAG00000006636	-	97	84.715	Pygocentrus_nattereri
ENSAPEG00000023108	-	99	83.116	ENSRNOG00000009271	Smarca4	100	82.948	Rattus_norvegicus
ENSAPEG00000023108	-	99	82.899	ENSRBIG00000038696	SMARCA4	99	83.008	Rhinopithecus_bieti
ENSAPEG00000023108	-	99	82.959	ENSRROG00000045509	SMARCA4	100	83.067	Rhinopithecus_roxellana
ENSAPEG00000023108	-	99	83.383	ENSSBOG00000026896	SMARCA4	99	83.333	Saimiri_boliviensis_boliviensis
ENSAPEG00000023108	-	99	83.155	ENSSHAG00000001642	SMARCA4	100	83.047	Sarcophilus_harrisii
ENSAPEG00000023108	-	98	86.825	ENSSFOG00015013823	smarca4	99	84.579	Scleropages_formosus
ENSAPEG00000023108	-	94	82.544	ENSSFOG00015009921	-	91	89.067	Scleropages_formosus
ENSAPEG00000023108	-	100	94.706	ENSSMAG00000014082	-	100	94.706	Scophthalmus_maximus
ENSAPEG00000023108	-	98	83.608	ENSSMAG00000003200	smarca4a	97	82.682	Scophthalmus_maximus
ENSAPEG00000023108	-	97	97.970	ENSSDUG00000005388	-	100	97.970	Seriola_dumerili
ENSAPEG00000023108	-	99	79.246	ENSSDUG00000017298	smarca4a	100	79.292	Seriola_dumerili
ENSAPEG00000023108	-	96	92.959	ENSSLDG00000023663	-	99	93.719	Seriola_lalandi_dorsalis
ENSAPEG00000023108	-	99	81.974	ENSSLDG00000024486	smarca4a	100	84.965	Seriola_lalandi_dorsalis
ENSAPEG00000023108	-	65	96.894	ENSSARG00000013477	SMARCA4	82	96.894	Sorex_araneus
ENSAPEG00000023108	-	95	80.397	ENSSPUG00000004558	SMARCA4	98	80.611	Sphenodon_punctatus
ENSAPEG00000023108	-	100	98.219	ENSSPAG00000012533	-	100	98.219	Stegastes_partitus
ENSAPEG00000023108	-	98	84.961	ENSSPAG00000004248	smarca4a	99	84.640	Stegastes_partitus
ENSAPEG00000023108	-	99	83.166	ENSSSCG00000013629	SMARCA4	100	83.215	Sus_scrofa
ENSAPEG00000023108	-	50	84.552	ENSTGUG00000015488	-	99	84.570	Taeniopygia_guttata
ENSAPEG00000023108	-	88	80.942	ENSTRUG00000004885	smarca4a	100	80.969	Takifugu_rubripes
ENSAPEG00000023108	-	97	92.118	ENSTRUG00000001378	SMARCA4	99	92.118	Takifugu_rubripes
ENSAPEG00000023108	-	99	88.783	ENSTNIG00000004536	SMARCA4	100	89.436	Tetraodon_nigroviridis
ENSAPEG00000023108	-	71	84.397	ENSTNIG00000004859	-	100	84.397	Tetraodon_nigroviridis
ENSAPEG00000023108	-	51	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSAPEG00000023108	-	99	80.479	ENSTTRG00000009519	SMARCA4	100	80.877	Tursiops_truncatus
ENSAPEG00000023108	-	99	83.195	ENSUAMG00000014661	SMARCA4	100	83.245	Ursus_americanus
ENSAPEG00000023108	-	94	90.107	ENSUMAG00000022005	SMARCA4	98	89.910	Ursus_maritimus
ENSAPEG00000023108	-	99	83.195	ENSVVUG00000017820	SMARCA4	97	83.245	Vulpes_vulpes
ENSAPEG00000023108	-	99	78.284	ENSXETG00000009355	smarca4	99	77.998	Xenopus_tropicalis
ENSAPEG00000023108	-	99	91.972	ENSXCOG00000013494	-	99	91.779	Xiphophorus_couchianus
ENSAPEG00000023108	-	99	80.751	ENSXMAG00000006321	smarca4a	100	83.369	Xiphophorus_maculatus
ENSAPEG00000023108	-	100	94.405	ENSXMAG00000007030	-	100	94.405	Xiphophorus_maculatus