EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000023338 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: si:dkey-13a21.4
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 6587 bases
Position: chr6:20694267-20700853
Accession: ZDB-GENE-040724-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000032844	MMR_HSR1	PF01926.23	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000033709	-	3508	-	ENSAPEP00000032844	221 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000023338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000023338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000023338	si:dkey-13a21.4	67	39.333	ENSAPEG00000005001	rab33ba	64	39.333
ENSAPEG00000023338	si:dkey-13a21.4	83	40.000	ENSAPEG00000012044	rab30	89	40.000
ENSAPEG00000023338	si:dkey-13a21.4	80	35.754	ENSAPEG00000020892	rab6ba	92	35.754
ENSAPEG00000023338	si:dkey-13a21.4	77	33.918	ENSAPEG00000003164	rabl2	73	33.918
ENSAPEG00000023338	si:dkey-13a21.4	81	30.726	ENSAPEG00000019758	rab23	90	31.088
ENSAPEG00000023338	si:dkey-13a21.4	88	36.275	ENSAPEG00000015376	rab33a	90	35.468
ENSAPEG00000023338	si:dkey-13a21.4	73	37.037	ENSAPEG00000017868	-	72	37.037
ENSAPEG00000023338	si:dkey-13a21.4	73	35.802	ENSAPEG00000022217	-	73	35.802
ENSAPEG00000023338	si:dkey-13a21.4	81	54.144	ENSAPEG00000017200	RAB7A	87	54.144
ENSAPEG00000023338	si:dkey-13a21.4	81	32.240	ENSAPEG00000009177	rab11ba	81	32.240
ENSAPEG00000023338	si:dkey-13a21.4	73	37.654	ENSAPEG00000012105	rab1ba	79	37.654
ENSAPEG00000023338	si:dkey-13a21.4	70	40.385	ENSAPEG00000005176	zgc:101559	65	40.385
ENSAPEG00000023338	si:dkey-13a21.4	71	41.772	ENSAPEG00000001130	rab35b	76	41.772
ENSAPEG00000023338	si:dkey-13a21.4	56	40.000	ENSAPEG00000015430	-	86	40.385
ENSAPEG00000023338	si:dkey-13a21.4	71	37.342	ENSAPEG00000022106	rab25b	76	37.342
ENSAPEG00000023338	si:dkey-13a21.4	76	36.905	ENSAPEG00000004121	-	82	36.905
ENSAPEG00000023338	si:dkey-13a21.4	72	49.068	ENSAPEG00000024142	rab9a	78	49.068
ENSAPEG00000023338	si:dkey-13a21.4	71	35.625	ENSAPEG00000022135	rab11al	72	35.443
ENSAPEG00000023338	si:dkey-13a21.4	90	50.971	ENSAPEG00000000306	RAB7A	99	50.971
ENSAPEG00000023338	si:dkey-13a21.4	75	33.728	ENSAPEG00000001800	-	88	33.728
ENSAPEG00000023338	si:dkey-13a21.4	58	32.061	ENSAPEG00000008940	si:ch73-116o1.2	75	31.875
ENSAPEG00000023338	si:dkey-13a21.4	73	32.927	ENSAPEG00000009586	dnajc27	60	32.927
ENSAPEG00000023338	si:dkey-13a21.4	72	34.969	ENSAPEG00000018607	rab34b	58	34.969
ENSAPEG00000023338	si:dkey-13a21.4	73	38.889	ENSAPEG00000001358	rab1ab	78	38.889
ENSAPEG00000023338	si:dkey-13a21.4	75	33.529	ENSAPEG00000023408	rheb	89	33.529
ENSAPEG00000023338	si:dkey-13a21.4	66	30.612	ENSAPEG00000002251	rras	79	31.447
ENSAPEG00000023338	si:dkey-13a21.4	72	30.588	ENSAPEG00000014649	rasl11a	64	30.588
ENSAPEG00000023338	si:dkey-13a21.4	72	37.267	ENSAPEG00000013255	rab12	65	37.267
ENSAPEG00000023338	si:dkey-13a21.4	73	50.617	ENSAPEG00000015652	-	75	50.617
ENSAPEG00000023338	si:dkey-13a21.4	73	35.802	ENSAPEG00000014246	rab14	73	35.802
ENSAPEG00000023338	si:dkey-13a21.4	88	34.328	ENSAPEG00000005857	-	94	34.328
ENSAPEG00000023338	si:dkey-13a21.4	81	32.240	ENSAPEG00000016590	rab11bb	81	32.240
ENSAPEG00000023338	si:dkey-13a21.4	80	35.028	ENSAPEG00000001822	-	82	35.028
ENSAPEG00000023338	si:dkey-13a21.4	52	31.624	ENSAPEG00000001372	RAP2B	89	32.812
ENSAPEG00000023338	si:dkey-13a21.4	88	34.328	ENSAPEG00000007731	rab6bb	94	34.328
ENSAPEG00000023338	si:dkey-13a21.4	87	35.052	ENSAPEG00000011209	rab22a	97	35.052
ENSAPEG00000023338	si:dkey-13a21.4	71	36.076	ENSAPEG00000013500	rab25a	73	36.076
ENSAPEG00000023338	si:dkey-13a21.4	81	33.696	ENSAPEG00000010503	rab34a	68	33.696
ENSAPEG00000023338	si:dkey-13a21.4	80	35.028	ENSAPEG00000007912	rab15	81	35.028
ENSAPEG00000023338	si:dkey-13a21.4	82	47.568	ENSAPEG00000014149	rab9b	92	47.568
ENSAPEG00000023338	si:dkey-13a21.4	78	38.418	ENSAPEG00000005392	rab18a	85	38.418
ENSAPEG00000023338	si:dkey-13a21.4	67	41.611	ENSAPEG00000022923	rab18b	71	41.611
ENSAPEG00000023338	si:dkey-13a21.4	73	38.889	ENSAPEG00000022488	-	78	38.889
ENSAPEG00000023338	si:dkey-13a21.4	83	33.163	ENSAPEG00000011251	rab36	75	33.163
ENSAPEG00000023338	si:dkey-13a21.4	73	39.506	ENSAPEG00000022171	zgc:171927	76	39.130
ENSAPEG00000023338	si:dkey-13a21.4	73	37.037	ENSAPEG00000010294	rab2a	75	37.037
ENSAPEG00000023338	si:dkey-13a21.4	71	34.810	ENSAPEG00000000075	rab11a	72	34.810
ENSAPEG00000023338	si:dkey-13a21.4	80	35.556	ENSAPEG00000002915	RAB17	78	35.556
ENSAPEG00000023338	si:dkey-13a21.4	73	37.654	ENSAPEG00000013376	rab5aa	73	37.654
ENSAPEG00000023338	si:dkey-13a21.4	71	40.252	ENSAPEG00000006500	si:dkey-16l2.16	74	40.252
ENSAPEG00000023338	si:dkey-13a21.4	66	30.822	ENSAPEG00000008980	rras2	76	31.210
ENSAPEG00000023338	si:dkey-13a21.4	71	36.478	ENSAPEG00000016172	-	73	36.478
ENSAPEG00000023338	si:dkey-13a21.4	71	38.365	ENSAPEG00000007713	rab42a	60	38.365
ENSAPEG00000023338	si:dkey-13a21.4	66	30.345	ENSAPEG00000009546	hrasb	80	31.410
ENSAPEG00000023338	si:dkey-13a21.4	71	37.500	ENSAPEG00000017138	RAB39B	74	37.500
ENSAPEG00000023338	si:dkey-13a21.4	88	35.500	ENSAPEG00000007931	RAB41	92	35.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000023338	si:dkey-13a21.4	92	87.255	ENSACIG00000011024	si:dkey-13a21.4	100	87.255	Amphilophus_citrinellus
ENSAPEG00000023338	si:dkey-13a21.4	92	97.549	ENSAOCG00000020491	si:dkey-13a21.4	100	97.549	Amphiprion_ocellaris
ENSAPEG00000023338	si:dkey-13a21.4	92	81.373	ENSATEG00000014958	si:dkey-13a21.4	100	81.373	Anabas_testudineus
ENSAPEG00000023338	si:dkey-13a21.4	88	50.769	ENSACAG00000012345	-	97	50.769	Anolis_carolinensis
ENSAPEG00000023338	si:dkey-13a21.4	93	85.922	ENSACLG00000021109	si:dkey-13a21.4	100	85.922	Astatotilapia_calliptera
ENSAPEG00000023338	si:dkey-13a21.4	88	55.941	ENSAMXG00000032663	si:dkey-13a21.4	93	55.941	Astyanax_mexicanus
ENSAPEG00000023338	si:dkey-13a21.4	82	56.831	WBGene00004271	rab-7	100	51.675	Caenorhabditis_elegans
ENSAPEG00000023338	si:dkey-13a21.4	92	85.294	ENSCVAG00000001150	si:dkey-13a21.4	100	85.294	Cyprinodon_variegatus
ENSAPEG00000023338	si:dkey-13a21.4	88	63.590	ENSDARG00000026098	si:dkey-13a21.4	95	63.590	Danio_rerio
ENSAPEG00000023338	si:dkey-13a21.4	80	51.667	ENSDNOG00000043559	-	96	48.990	Dasypus_novemcinctus
ENSAPEG00000023338	si:dkey-13a21.4	92	82.927	ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	Fundulus_heteroclitus
ENSAPEG00000023338	si:dkey-13a21.4	92	81.373	ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	Gambusia_affinis
ENSAPEG00000023338	si:dkey-13a21.4	93	86.408	ENSHBUG00000014023	si:dkey-13a21.4	100	86.408	Haplochromis_burtoni
ENSAPEG00000023338	si:dkey-13a21.4	79	79.885	ENSKMAG00000021039	si:dkey-13a21.4	73	79.885	Kryptolebias_marmoratus
ENSAPEG00000023338	si:dkey-13a21.4	92	80.392	ENSLBEG00000018180	si:dkey-13a21.4	100	80.392	Labrus_bergylta
ENSAPEG00000023338	si:dkey-13a21.4	92	60.680	ENSLOCG00000014749	si:dkey-13a21.4	100	60.680	Lepisosteus_oculatus
ENSAPEG00000023338	si:dkey-13a21.4	77	52.632	ENSLAFG00000028984	-	83	52.632	Loxodonta_africana
ENSAPEG00000023338	si:dkey-13a21.4	92	83.824	ENSMAMG00000021095	si:dkey-13a21.4	100	83.824	Mastacembelus_armatus
ENSAPEG00000023338	si:dkey-13a21.4	93	85.922	ENSMZEG00005010220	si:dkey-13a21.4	100	85.922	Maylandia_zebra
ENSAPEG00000023338	si:dkey-13a21.4	93	85.437	ENSNBRG00000023214	si:dkey-13a21.4	100	85.437	Neolamprologus_brichardi
ENSAPEG00000023338	si:dkey-13a21.4	92	86.275	ENSONIG00000020296	si:dkey-13a21.4	100	86.275	Oreochromis_niloticus
ENSAPEG00000023338	si:dkey-13a21.4	92	76.961	ENSORLG00000025098	si:dkey-13a21.4	100	76.961	Oryzias_latipes
ENSAPEG00000023338	si:dkey-13a21.4	92	76.961	ENSORLG00020019465	si:dkey-13a21.4	100	76.961	Oryzias_latipes_hni
ENSAPEG00000023338	si:dkey-13a21.4	92	77.451	ENSORLG00015015121	si:dkey-13a21.4	100	77.451	Oryzias_latipes_hsok
ENSAPEG00000023338	si:dkey-13a21.4	88	62.437	ENSPKIG00000008691	si:dkey-13a21.4	96	62.437	Paramormyrops_kingsleyae
ENSAPEG00000023338	si:dkey-13a21.4	93	74.757	ENSPMGG00000023170	si:dkey-13a21.4	98	74.757	Periophthalmus_magnuspinnatus
ENSAPEG00000023338	si:dkey-13a21.4	92	82.353	ENSPFOG00000015409	si:dkey-13a21.4	100	82.353	Poecilia_formosa
ENSAPEG00000023338	si:dkey-13a21.4	92	82.353	ENSPLAG00000019688	si:dkey-13a21.4	100	82.353	Poecilia_latipinna
ENSAPEG00000023338	si:dkey-13a21.4	92	82.353	ENSPMEG00000019159	si:dkey-13a21.4	100	82.353	Poecilia_mexicana
ENSAPEG00000023338	si:dkey-13a21.4	92	80.882	ENSPREG00000022241	si:dkey-13a21.4	100	80.882	Poecilia_reticulata
ENSAPEG00000023338	si:dkey-13a21.4	93	85.922	ENSPNYG00000018613	si:dkey-13a21.4	100	85.922	Pundamilia_nyererei
ENSAPEG00000023338	si:dkey-13a21.4	92	45.238	YML001W	YPT7	100	45.238	Saccharomyces_cerevisiae
ENSAPEG00000023338	si:dkey-13a21.4	88	63.776	ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	Scleropages_formosus
ENSAPEG00000023338	si:dkey-13a21.4	90	84.343	ENSSMAG00000013945	si:dkey-13a21.4	96	84.343	Scophthalmus_maximus
ENSAPEG00000023338	si:dkey-13a21.4	92	87.255	ENSSDUG00000019738	si:dkey-13a21.4	100	87.255	Seriola_dumerili
ENSAPEG00000023338	si:dkey-13a21.4	92	88.235	ENSSLDG00000011597	si:dkey-13a21.4	100	88.235	Seriola_lalandi_dorsalis
ENSAPEG00000023338	si:dkey-13a21.4	72	60.000	ENSXETG00000014257	mgc75872	81	59.006	Xenopus_tropicalis