EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000023342 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 14008 bases
Position: chr2:35216490-35230497
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000032849	RRM_5	PF13893.6	2e-06	1	1
ENSAPEP00000032849	RRM_1	PF00076.22	7e-14	1	1
ENSAPEP00000032849	SAP	PF02037.27	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000033714	-	3403	-	ENSAPEP00000032849	821 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000023342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000023342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000023342	safb	66	42.882	ENSG00000160633	SAFB	95	47.802	Homo_sapiens
ENSAPEG00000023342	safb	100	97.077	ENSAPOG00000022508	safb	100	97.077	Acanthochromis_polyacanthus
ENSAPEG00000023342	safb	66	43.112	ENSAMEG00000012254	SAFB	90	43.972	Ailuropoda_melanoleuca
ENSAPEG00000023342	safb	100	75.239	ENSACIG00000006247	safb	100	75.120	Amphilophus_citrinellus
ENSAPEG00000023342	safb	95	99.617	ENSAOCG00000006308	safb	100	99.617	Amphiprion_ocellaris
ENSAPEG00000023342	safb	100	85.340	ENSATEG00000004998	safb	100	85.459	Anabas_testudineus
ENSAPEG00000023342	safb	59	46.055	ENSAPLG00000006355	-	96	50.310	Anas_platyrhynchos
ENSAPEG00000023342	safb	60	41.519	ENSAPLG00000005780	-	93	45.752	Anas_platyrhynchos
ENSAPEG00000023342	safb	66	43.718	ENSANAG00000028821	SAFB	90	45.121	Aotus_nancymaae
ENSAPEG00000023342	safb	100	78.947	ENSACLG00000001926	safb	100	78.708	Astatotilapia_calliptera
ENSAPEG00000023342	safb	98	64.512	ENSAMXG00000018154	safb	100	64.846	Astyanax_mexicanus
ENSAPEG00000023342	safb	95	43.581	ENSBTAG00000007875	SAFB	91	43.463	Bos_taurus
ENSAPEG00000023342	safb	66	43.042	ENSCAFG00000018803	SAFB	77	44.587	Canis_familiaris
ENSAPEG00000023342	safb	66	43.042	ENSCAFG00020018943	SAFB	90	44.610	Canis_lupus_dingo
ENSAPEG00000023342	safb	95	44.094	ENSCHIG00000007262	SAFB	91	43.986	Capra_hircus
ENSAPEG00000023342	safb	55	44.031	ENSTSYG00000001851	-	83	46.563	Carlito_syrichta
ENSAPEG00000023342	safb	66	43.718	ENSCCAG00000020193	SAFB	90	45.276	Cebus_capucinus
ENSAPEG00000023342	safb	66	42.539	ENSCATG00000029994	SAFB	90	44.713	Cercocebus_atys
ENSAPEG00000023342	safb	66	42.424	ENSCSAG00000009949	SAFB	90	44.828	Chlorocebus_sabaeus
ENSAPEG00000023342	safb	59	33.160	ENSCHOG00000003208	SAFB	87	39.147	Choloepus_hoffmanni
ENSAPEG00000023342	safb	92	42.825	ENSCPBG00000010928	-	92	45.197	Chrysemys_picta_bellii
ENSAPEG00000023342	safb	90	45.000	ENSCPBG00000010936	-	91	46.894	Chrysemys_picta_bellii
ENSAPEG00000023342	safb	83	43.186	ENSCANG00000004774	-	89	43.950	Colobus_angolensis_palliatus
ENSAPEG00000023342	safb	95	41.124	ENSCANG00000019754	-	89	42.724	Colobus_angolensis_palliatus
ENSAPEG00000023342	safb	64	68.165	ENSCSEG00000019870	safb	100	69.390	Cynoglossus_semilaevis
ENSAPEG00000023342	safb	100	65.223	ENSCVAG00000002226	safb	100	66.065	Cyprinodon_variegatus
ENSAPEG00000023342	safb	96	62.530	ENSDARG00000020467	safb	98	62.761	Danio_rerio
ENSAPEG00000023342	safb	66	43.387	ENSDNOG00000015746	SAFB	95	42.713	Dasypus_novemcinctus
ENSAPEG00000023342	safb	54	39.885	ENSETEG00000018679	SAFB	62	53.191	Echinops_telfairi
ENSAPEG00000023342	safb	64	42.738	ENSEASG00005023019	SAFB	88	44.301	Equus_asinus_asinus
ENSAPEG00000023342	safb	64	43.072	ENSECAG00000018659	SAFB	81	45.055	Equus_caballus
ENSAPEG00000023342	safb	99	65.046	ENSELUG00000022327	safb	99	64.943	Esox_lucius
ENSAPEG00000023342	safb	66	43.018	ENSFCAG00000011835	SAFB	90	44.612	Felis_catus
ENSAPEG00000023342	safb	64	43.709	ENSFALG00000013882	-	83	46.636	Ficedula_albicollis
ENSAPEG00000023342	safb	100	68.675	ENSFHEG00000004219	safb	100	69.471	Fundulus_heteroclitus
ENSAPEG00000023342	safb	100	67.217	ENSGMOG00000014280	safb	100	67.803	Gadus_morhua
ENSAPEG00000023342	safb	66	43.863	ENSGALG00000013365	-	92	46.154	Gallus_gallus
ENSAPEG00000023342	safb	64	43.879	ENSGALG00000001948	-	90	48.543	Gallus_gallus
ENSAPEG00000023342	safb	100	66.667	ENSGAFG00000016162	safb	100	66.435	Gambusia_affinis
ENSAPEG00000023342	safb	100	75.346	ENSGACG00000011385	safb	100	75.576	Gasterosteus_aculeatus
ENSAPEG00000023342	safb	95	48.355	ENSGAGG00000008424	-	95	49.719	Gopherus_agassizii
ENSAPEG00000023342	safb	67	49.591	ENSGAGG00000017702	-	82	55.495	Gopherus_agassizii
ENSAPEG00000023342	safb	66	43.053	ENSGGOG00000015109	SAFB	90	44.943	Gorilla_gorilla
ENSAPEG00000023342	safb	100	73.238	ENSHBUG00000009218	safb	100	71.685	Haplochromis_burtoni
ENSAPEG00000023342	safb	94	66.667	ENSHCOG00000001705	safb	99	67.350	Hippocampus_comes
ENSAPEG00000023342	safb	99	63.007	ENSIPUG00000024869	safb2	100	62.631	Ictalurus_punctatus
ENSAPEG00000023342	safb	64	42.044	ENSJJAG00000009021	Safb	90	44.671	Jaculus_jaculus
ENSAPEG00000023342	safb	100	80.579	ENSKMAG00000022308	safb	100	80.458	Kryptolebias_marmoratus
ENSAPEG00000023342	safb	100	80.924	ENSLBEG00000006015	safb	100	80.569	Labrus_bergylta
ENSAPEG00000023342	safb	65	43.062	ENSLACG00000018090	SAFB	97	49.067	Latimeria_chalumnae
ENSAPEG00000023342	safb	98	63.287	ENSLOCG00000003613	safb	99	64.726	Lepisosteus_oculatus
ENSAPEG00000023342	safb	64	43.922	ENSLAFG00000003840	SAFB	89	45.381	Loxodonta_africana
ENSAPEG00000023342	safb	66	42.539	ENSMFAG00000003885	SAFB	90	44.804	Macaca_fascicularis
ENSAPEG00000023342	safb	66	43.089	ENSMMUG00000017970	SAFB	90	44.713	Macaca_mulatta
ENSAPEG00000023342	safb	66	40.946	ENSMNEG00000035637	SAFB	89	43.772	Macaca_nemestrina
ENSAPEG00000023342	safb	65	39.773	ENSMLEG00000038637	SAFB	89	43.529	Mandrillus_leucophaeus
ENSAPEG00000023342	safb	100	85.185	ENSMAMG00000003357	safb	91	84.946	Mastacembelus_armatus
ENSAPEG00000023342	safb	100	82.718	ENSMZEG00005009120	safb	100	82.718	Maylandia_zebra
ENSAPEG00000023342	safb	97	41.967	ENSMGAG00000001101	-	93	45.241	Meleagris_gallopavo
ENSAPEG00000023342	safb	66	43.322	ENSMICG00000008739	-	91	44.317	Microcebus_murinus
ENSAPEG00000023342	safb	86	38.423	ENSMICG00000046795	-	70	66.197	Microcebus_murinus
ENSAPEG00000023342	safb	98	43.804	ENSMODG00000001236	SAFB	90	45.114	Monodelphis_domestica
ENSAPEG00000023342	safb	100	82.861	ENSMALG00000020330	safb	100	82.506	Monopterus_albus
ENSAPEG00000023342	safb	98	43.511	ENSMLUG00000001081	SAFB	90	44.189	Myotis_lucifugus
ENSAPEG00000023342	safb	64	42.788	ENSNGAG00000019882	Safb	91	43.828	Nannospalax_galili
ENSAPEG00000023342	safb	66	42.882	ENSNLEG00000013551	SAFB	94	44.919	Nomascus_leucogenys
ENSAPEG00000023342	safb	100	82.619	ENSONIG00000002318	safb	100	82.262	Oreochromis_niloticus
ENSAPEG00000023342	safb	86	39.588	ENSOCUG00000014628	SAFB	90	40.026	Oryctolagus_cuniculus
ENSAPEG00000023342	safb	98	77.083	ENSORLG00000016989	safb	100	76.527	Oryzias_latipes
ENSAPEG00000023342	safb	67	69.620	ENSORLG00020000404	safb	100	67.266	Oryzias_latipes_hni
ENSAPEG00000023342	safb	98	77.206	ENSORLG00015010733	safb	100	76.831	Oryzias_latipes_hsok
ENSAPEG00000023342	safb	100	77.229	ENSOMEG00000009066	safb	100	77.108	Oryzias_melastigma
ENSAPEG00000023342	safb	64	43.947	ENSOGAG00000027769	SAFB	90	45.075	Otolemur_garnettii
ENSAPEG00000023342	safb	95	40.745	ENSOARG00000007662	-	91	40.460	Ovis_aries
ENSAPEG00000023342	safb	66	42.710	ENSPPAG00000035129	SAFB	90	44.804	Pan_paniscus
ENSAPEG00000023342	safb	66	43.018	ENSPPRG00000017197	SAFB	90	44.612	Panthera_pardus
ENSAPEG00000023342	safb	66	42.710	ENSPTRG00000010335	SAFB	90	44.804	Pan_troglodytes
ENSAPEG00000023342	safb	66	42.513	ENSPANG00000007770	SAFB	90	44.804	Papio_anubis
ENSAPEG00000023342	safb	99	64.351	ENSPKIG00000009902	safb	99	64.579	Paramormyrops_kingsleyae
ENSAPEG00000023342	safb	99	46.170	ENSPSIG00000009367	-	91	46.886	Pelodiscus_sinensis
ENSAPEG00000023342	safb	99	46.788	ENSPSIG00000011679	-	92	50.242	Pelodiscus_sinensis
ENSAPEG00000023342	safb	100	69.139	ENSPFOG00000007745	safb	100	69.212	Poecilia_formosa
ENSAPEG00000023342	safb	100	65.901	ENSPLAG00000001614	safb	100	66.476	Poecilia_latipinna
ENSAPEG00000023342	safb	100	68.780	ENSPMEG00000021023	safb	100	68.854	Poecilia_mexicana
ENSAPEG00000023342	safb	100	67.020	ENSPREG00000012496	safb	100	67.488	Poecilia_reticulata
ENSAPEG00000023342	safb	66	42.743	ENSPPYG00000009428	SAFB	89	44.816	Pongo_abelii
ENSAPEG00000023342	safb	64	39.245	ENSPCAG00000006475	SAFB	88	42.706	Procavia_capensis
ENSAPEG00000023342	safb	95	41.526	ENSPCOG00000014090	SAFB	91	40.711	Propithecus_coquereli
ENSAPEG00000023342	safb	71	56.364	ENSPVAG00000004913	SAFB	64	56.364	Pteropus_vampyrus
ENSAPEG00000023342	safb	99	64.524	ENSPNAG00000021838	safb	99	65.127	Pygocentrus_nattereri
ENSAPEG00000023342	safb	64	39.937	ENSRNOG00000050543	Safb	91	41.118	Rattus_norvegicus
ENSAPEG00000023342	safb	66	44.234	ENSRBIG00000042509	SAFB	86	46.658	Rhinopithecus_bieti
ENSAPEG00000023342	safb	66	42.710	ENSRROG00000029278	SAFB	90	45.035	Rhinopithecus_roxellana
ENSAPEG00000023342	safb	66	43.879	ENSSBOG00000026291	SAFB	90	45.183	Saimiri_boliviensis_boliviensis
ENSAPEG00000023342	safb	99	63.284	ENSSFOG00015008156	safb	99	63.740	Scleropages_formosus
ENSAPEG00000023342	safb	100	83.274	ENSSMAG00000009316	safb	100	83.274	Scophthalmus_maximus
ENSAPEG00000023342	safb	100	81.949	ENSSDUG00000009652	safb	100	81.348	Seriola_dumerili
ENSAPEG00000023342	safb	100	88.087	ENSSLDG00000001670	safb	100	87.726	Seriola_lalandi_dorsalis
ENSAPEG00000023342	safb	59	40.917	ENSSARG00000010475	SAFB	92	41.955	Sorex_araneus
ENSAPEG00000023342	safb	56	42.256	ENSSPUG00000009747	-	98	40.736	Sphenodon_punctatus
ENSAPEG00000023342	safb	51	44.466	ENSSPUG00000009820	-	94	48.656	Sphenodon_punctatus
ENSAPEG00000023342	safb	99	82.987	ENSSPAG00000015682	safb	99	82.375	Stegastes_partitus
ENSAPEG00000023342	safb	64	43.137	ENSSSCG00000013522	SAFB	96	44.583	Sus_scrofa
ENSAPEG00000023342	safb	63	45.833	ENSTGUG00000000489	-	96	51.462	Taeniopygia_guttata
ENSAPEG00000023342	safb	100	78.110	ENSTRUG00000003567	safb	100	77.871	Takifugu_rubripes
ENSAPEG00000023342	safb	91	64.409	ENSTNIG00000015470	safb	100	63.432	Tetraodon_nigroviridis
ENSAPEG00000023342	safb	65	75.000	ENSTTRG00000013588	SAFB	55	75.000	Tursiops_truncatus
ENSAPEG00000023342	safb	73	43.170	ENSUMAG00000009734	SAFB	72	56.180	Ursus_maritimus
ENSAPEG00000023342	safb	66	43.689	ENSVVUG00000013720	SAFB	77	44.820	Vulpes_vulpes
ENSAPEG00000023342	safb	100	69.258	ENSXMAG00000003458	safb	100	69.570	Xiphophorus_maculatus