EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000023581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 10199 bases
Position: chr6:20858805-20869003
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000033200	RRM_1	PF00076.22	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000034070	-	2978	-	ENSAPEP00000033200	244 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000023581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000023581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000023581	-	100	65.079	ENSAPEG00000013137	rbm38	98	64.683
ENSAPEG00000023581	-	95	59.746	ENSAPEG00000012234	rbm24a	100	59.677
ENSAPEG00000023581	-	64	71.429	ENSAPEG00000010059	rbm24b	100	59.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000023581	-	95	65.126	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSAPEG00000023581	-	100	98.770	ENSAPOG00000009939	-	100	98.770	Acanthochromis_polyacanthus
ENSAPEG00000023581	-	100	64.683	ENSAPOG00000003301	rbm38	98	64.286	Acanthochromis_polyacanthus
ENSAPEG00000023581	-	100	92.623	ENSACIG00000012502	-	100	97.458	Amphilophus_citrinellus
ENSAPEG00000023581	-	100	64.286	ENSACIG00000000010	rbm38	98	63.889	Amphilophus_citrinellus
ENSAPEG00000023581	-	97	99.578	ENSAOCG00000012559	RBM38	100	99.578	Amphiprion_ocellaris
ENSAPEG00000023581	-	100	65.079	ENSAOCG00000013497	-	98	64.683	Amphiprion_ocellaris
ENSAPEG00000023581	-	100	64.032	ENSATEG00000016366	rbm38	98	64.032	Anabas_testudineus
ENSAPEG00000023581	-	100	95.492	ENSATEG00000016710	-	100	95.492	Anabas_testudineus
ENSAPEG00000023581	-	95	66.809	ENSACAG00000016238	RBM38	90	63.248	Anolis_carolinensis
ENSAPEG00000023581	-	95	65.966	ENSANAG00000031959	RBM38	82	90.099	Aotus_nancymaae
ENSAPEG00000023581	-	100	90.164	ENSACLG00000019514	-	100	90.164	Astatotilapia_calliptera
ENSAPEG00000023581	-	96	65.385	ENSAMXG00000038120	rbm38	81	70.466	Astyanax_mexicanus
ENSAPEG00000023581	-	100	77.869	ENSAMXG00000015601	-	100	74.180	Astyanax_mexicanus
ENSAPEG00000023581	-	95	64.135	ENSBTAG00000008105	RBM38	91	63.445	Bos_taurus
ENSAPEG00000023581	-	95	65.966	ENSCJAG00000019139	RBM38	82	90.099	Callithrix_jacchus
ENSAPEG00000023581	-	95	65.823	ENSCAFG00020021943	RBM38	91	64.854	Canis_lupus_dingo
ENSAPEG00000023581	-	95	63.291	ENSCHIG00000002609	RBM38	91	62.025	Capra_hircus
ENSAPEG00000023581	-	95	64.286	ENSCPOG00000012781	RBM38	91	63.598	Cavia_porcellus
ENSAPEG00000023581	-	95	65.966	ENSCCAG00000036872	RBM38	82	90.099	Cebus_capucinus
ENSAPEG00000023581	-	95	65.401	ENSCATG00000032133	RBM38	82	90.099	Cercocebus_atys
ENSAPEG00000023581	-	95	63.866	ENSCLAG00000005906	RBM38	94	63.025	Chinchilla_lanigera
ENSAPEG00000023581	-	95	65.401	ENSCSAG00000015503	RBM38	90	63.559	Chlorocebus_sabaeus
ENSAPEG00000023581	-	93	66.953	ENSCPBG00000024059	RBM38	99	63.755	Chrysemys_picta_bellii
ENSAPEG00000023581	-	95	51.271	ENSCANG00000030105	-	80	47.660	Colobus_angolensis_palliatus
ENSAPEG00000023581	-	75	71.809	ENSCGRG00001012928	Rbm38	93	61.570	Cricetulus_griseus_chok1gshd
ENSAPEG00000023581	-	80	61.307	ENSCSEG00000020943	rbm38	60	67.403	Cynoglossus_semilaevis
ENSAPEG00000023581	-	100	90.984	ENSCSEG00000004701	-	100	90.984	Cynoglossus_semilaevis
ENSAPEG00000023581	-	100	88.525	ENSCVAG00000005472	-	100	88.525	Cyprinodon_variegatus
ENSAPEG00000023581	-	99	61.044	ENSCVAG00000015952	rbm38	98	61.111	Cyprinodon_variegatus
ENSAPEG00000023581	-	99	72.428	ENSDARG00000058818	rbm38	82	81.026	Danio_rerio
ENSAPEG00000023581	-	95	65.106	ENSDNOG00000032004	RBM38	100	63.248	Dasypus_novemcinctus
ENSAPEG00000023581	-	95	64.979	ENSECAG00000007700	RBM38	91	63.866	Equus_caballus
ENSAPEG00000023581	-	95	63.180	ENSEEUG00000013489	RBM38	91	63.180	Erinaceus_europaeus
ENSAPEG00000023581	-	90	67.699	ENSELUG00000000585	-	98	63.556	Esox_lucius
ENSAPEG00000023581	-	100	81.928	ENSELUG00000005849	-	100	79.518	Esox_lucius
ENSAPEG00000023581	-	95	64.979	ENSFCAG00000042916	RBM38	84	87.500	Felis_catus
ENSAPEG00000023581	-	69	76.744	ENSFALG00000010805	RBM38	88	72.353	Ficedula_albicollis
ENSAPEG00000023581	-	100	61.508	ENSFHEG00000017748	rbm38	98	60.714	Fundulus_heteroclitus
ENSAPEG00000023581	-	100	84.274	ENSFHEG00000006160	-	100	85.484	Fundulus_heteroclitus
ENSAPEG00000023581	-	75	88.108	ENSGMOG00000016655	-	99	85.946	Gadus_morhua
ENSAPEG00000023581	-	93	67.826	ENSGALG00000026081	RBM38	99	64.935	Gallus_gallus
ENSAPEG00000023581	-	94	86.087	ENSGACG00000009873	-	100	86.087	Gasterosteus_aculeatus
ENSAPEG00000023581	-	95	66.379	ENSGACG00000015224	rbm38	100	65.517	Gasterosteus_aculeatus
ENSAPEG00000023581	-	93	66.524	ENSGAGG00000001187	RBM38	99	63.755	Gopherus_agassizii
ENSAPEG00000023581	-	100	63.922	ENSHBUG00000012058	rbm38	98	63.492	Haplochromis_burtoni
ENSAPEG00000023581	-	100	90.164	ENSHBUG00000011778	-	100	90.164	Haplochromis_burtoni
ENSAPEG00000023581	-	95	60.759	ENSHGLG00000015077	RBM38	91	62.343	Heterocephalus_glaber_female
ENSAPEG00000023581	-	91	51.709	ENSHCOG00000019040	rbm38	78	55.612	Hippocampus_comes
ENSAPEG00000023581	-	85	91.304	ENSHCOG00000005622	-	57	91.919	Hippocampus_comes
ENSAPEG00000023581	-	100	72.470	ENSIPUG00000019349	-	100	70.850	Ictalurus_punctatus
ENSAPEG00000023581	-	92	60.086	ENSKMAG00000012402	rbm38	99	59.402	Kryptolebias_marmoratus
ENSAPEG00000023581	-	100	65.476	ENSLBEG00000018878	rbm38	98	64.286	Labrus_bergylta
ENSAPEG00000023581	-	100	91.935	ENSLBEG00000016163	RBM38	100	91.935	Labrus_bergylta
ENSAPEG00000023581	-	100	75.000	ENSLOCG00000003456	rbm38	100	73.361	Lepisosteus_oculatus
ENSAPEG00000023581	-	95	65.401	ENSMFAG00000043808	RBM38	82	90.099	Macaca_fascicularis
ENSAPEG00000023581	-	95	65.401	ENSMMUG00000031391	RBM38	82	90.099	Macaca_mulatta
ENSAPEG00000023581	-	95	65.401	ENSMNEG00000034683	RBM38	82	90.099	Macaca_nemestrina
ENSAPEG00000023581	-	100	66.667	ENSMAMG00000024135	rbm38	98	64.683	Mastacembelus_armatus
ENSAPEG00000023581	-	100	94.672	ENSMAMG00000020499	RBM38	100	94.672	Mastacembelus_armatus
ENSAPEG00000023581	-	100	90.164	ENSMZEG00005000849	-	100	90.164	Maylandia_zebra
ENSAPEG00000023581	-	100	63.922	ENSMZEG00005026036	rbm38	98	63.492	Maylandia_zebra
ENSAPEG00000023581	-	95	63.866	ENSMAUG00000021211	Rbm38	93	61.983	Mesocricetus_auratus
ENSAPEG00000023581	-	95	65.690	ENSMICG00000038011	RBM38	100	64.706	Microcebus_murinus
ENSAPEG00000023581	-	97	62.295	ENSMOCG00000008715	Rbm38	94	61.317	Microtus_ochrogaster
ENSAPEG00000023581	-	100	93.852	ENSMMOG00000020051	-	100	93.852	Mola_mola
ENSAPEG00000023581	-	93	65.217	ENSMODG00000016458	RBM38	91	64.629	Monodelphis_domestica
ENSAPEG00000023581	-	69	72.941	ENSMALG00000022327	rbm38	71	72.892	Monopterus_albus
ENSAPEG00000023581	-	77	95.767	ENSMALG00000004680	RBM38	72	95.767	Monopterus_albus
ENSAPEG00000023581	-	97	60.494	MGP_CAROLIEiJ_G0024745	Rbm38	94	62.295	Mus_caroli
ENSAPEG00000023581	-	97	60.494	ENSMUSG00000027510	Rbm38	94	62.295	Mus_musculus
ENSAPEG00000023581	-	97	60.082	MGP_PahariEiJ_G0026186	Rbm38	94	62.295	Mus_pahari
ENSAPEG00000023581	-	97	60.494	MGP_SPRETEiJ_G0025665	Rbm38	94	62.295	Mus_spretus
ENSAPEG00000023581	-	75	73.404	ENSMPUG00000006518	RBM38	91	72.340	Mustela_putorius_furo
ENSAPEG00000023581	-	95	64.135	ENSMLUG00000011140	RBM38	100	62.288	Myotis_lucifugus
ENSAPEG00000023581	-	100	64.314	ENSNBRG00000022685	rbm38	98	63.889	Neolamprologus_brichardi
ENSAPEG00000023581	-	100	90.574	ENSNBRG00000022545	-	100	90.574	Neolamprologus_brichardi
ENSAPEG00000023581	-	95	64.706	ENSODEG00000007980	RBM38	90	64.286	Octodon_degus
ENSAPEG00000023581	-	99	64.173	ENSONIG00000017073	rbm38	100	63.745	Oreochromis_niloticus
ENSAPEG00000023581	-	99	90.535	ENSONIG00000020324	-	100	90.535	Oreochromis_niloticus
ENSAPEG00000023581	-	92	65.939	ENSOANG00000009259	RBM38	81	62.996	Ornithorhynchus_anatinus
ENSAPEG00000023581	-	99	58.400	ENSORLG00000012154	rbm38	98	57.937	Oryzias_latipes
ENSAPEG00000023581	-	100	86.585	ENSORLG00000027180	-	100	87.805	Oryzias_latipes
ENSAPEG00000023581	-	100	86.585	ENSORLG00020020751	-	100	87.805	Oryzias_latipes_hni
ENSAPEG00000023581	-	100	58.824	ENSORLG00020017871	rbm38	98	58.730	Oryzias_latipes_hni
ENSAPEG00000023581	-	100	59.684	ENSORLG00015012606	rbm38	98	58.730	Oryzias_latipes_hsok
ENSAPEG00000023581	-	100	88.163	ENSORLG00015017040	-	100	88.163	Oryzias_latipes_hsok
ENSAPEG00000023581	-	100	90.574	ENSOMEG00000023912	-	100	90.574	Oryzias_melastigma
ENSAPEG00000023581	-	99	60.079	ENSOMEG00000006805	rbm38	98	59.524	Oryzias_melastigma
ENSAPEG00000023581	-	95	65.546	ENSOGAG00000029136	RBM38	90	64.435	Otolemur_garnettii
ENSAPEG00000023581	-	95	64.979	ENSPPRG00000009507	RBM38	84	87.500	Panthera_pardus
ENSAPEG00000023581	-	75	73.404	ENSPTRG00000013661	RBM38	82	90.099	Pan_troglodytes
ENSAPEG00000023581	-	52	84.127	ENSPTRG00000045845	-	68	84.127	Pan_troglodytes
ENSAPEG00000023581	-	95	65.401	ENSPANG00000020919	-	82	90.099	Papio_anubis
ENSAPEG00000023581	-	95	53.556	ENSPANG00000033127	-	94	51.055	Papio_anubis
ENSAPEG00000023581	-	100	70.281	ENSPKIG00000025417	rbm38	100	69.880	Paramormyrops_kingsleyae
ENSAPEG00000023581	-	100	71.660	ENSPKIG00000018122	-	100	86.441	Paramormyrops_kingsleyae
ENSAPEG00000023581	-	96	64.876	ENSPSIG00000011649	RBM38	94	62.185	Pelodiscus_sinensis
ENSAPEG00000023581	-	100	83.468	ENSPMGG00000017094	-	100	83.468	Periophthalmus_magnuspinnatus
ENSAPEG00000023581	-	99	63.745	ENSPMGG00000011343	rbm38	98	62.000	Periophthalmus_magnuspinnatus
ENSAPEG00000023581	-	93	65.236	ENSPCIG00000013648	RBM38	91	63.319	Phascolarctos_cinereus
ENSAPEG00000023581	-	100	59.055	ENSPFOG00000011658	rbm38	98	59.608	Poecilia_formosa
ENSAPEG00000023581	-	100	59.608	ENSPLAG00000005218	rbm38	98	59.608	Poecilia_latipinna
ENSAPEG00000023581	-	100	86.992	ENSPLAG00000002500	-	100	83.740	Poecilia_latipinna
ENSAPEG00000023581	-	100	58.661	ENSPMEG00000015770	rbm38	98	59.608	Poecilia_mexicana
ENSAPEG00000023581	-	100	59.055	ENSPREG00000007398	rbm38	98	59.608	Poecilia_reticulata
ENSAPEG00000023581	-	95	65.272	ENSPCOG00000026201	RBM38	81	90.099	Propithecus_coquereli
ENSAPEG00000023581	-	96	43.154	ENSPVAG00000006457	RBM38	92	41.224	Pteropus_vampyrus
ENSAPEG00000023581	-	100	63.529	ENSPNYG00000021373	rbm38	98	63.095	Pundamilia_nyererei
ENSAPEG00000023581	-	100	90.164	ENSPNYG00000019727	-	100	96.610	Pundamilia_nyererei
ENSAPEG00000023581	-	96	70.213	ENSPNAG00000010596	rbm38	82	77.551	Pygocentrus_nattereri
ENSAPEG00000023581	-	100	77.459	ENSPNAG00000015123	-	98	82.836	Pygocentrus_nattereri
ENSAPEG00000023581	-	97	63.934	ENSRNOG00000006420	Rbm38	94	61.317	Rattus_norvegicus
ENSAPEG00000023581	-	93	54.783	ENSRROG00000036388	-	88	51.092	Rhinopithecus_roxellana
ENSAPEG00000023581	-	95	65.546	ENSSBOG00000031053	RBM38	93	90.099	Saimiri_boliviensis_boliviensis
ENSAPEG00000023581	-	100	70.161	ENSSFOG00015004453	rbm38	100	72.470	Scleropages_formosus
ENSAPEG00000023581	-	100	96.311	ENSSDUG00000021082	RBM38	100	96.311	Seriola_dumerili
ENSAPEG00000023581	-	100	66.270	ENSSDUG00000022611	rbm38	98	66.270	Seriola_dumerili
ENSAPEG00000023581	-	100	96.311	ENSSLDG00000011778	RBM38	100	96.311	Seriola_lalandi_dorsalis
ENSAPEG00000023581	-	100	66.270	ENSSLDG00000010845	rbm38	98	66.270	Seriola_lalandi_dorsalis
ENSAPEG00000023581	-	100	65.079	ENSSPAG00000011113	rbm38	98	64.683	Stegastes_partitus
ENSAPEG00000023581	-	100	98.361	ENSSPAG00000020989	RBM38	100	98.361	Stegastes_partitus
ENSAPEG00000023581	-	95	65.401	ENSSSCG00000007504	RBM38	91	64.286	Sus_scrofa
ENSAPEG00000023581	-	100	88.571	ENSTRUG00000019869	-	100	88.571	Takifugu_rubripes
ENSAPEG00000023581	-	98	64.634	ENSTRUG00000024954	rbm38	97	63.821	Takifugu_rubripes
ENSAPEG00000023581	-	95	85.714	ENSTNIG00000007093	-	100	85.281	Tetraodon_nigroviridis
ENSAPEG00000023581	-	95	65.546	ENSUAMG00000019780	RBM38	91	64.167	Ursus_americanus
ENSAPEG00000023581	-	95	65.823	ENSVVUG00000017246	RBM38	91	64.854	Vulpes_vulpes
ENSAPEG00000023581	-	93	63.478	ENSXETG00000011268	rbm38	97	61.135	Xenopus_tropicalis
ENSAPEG00000023581	-	71	76.536	ENSXCOG00000017324	-	62	90.441	Xiphophorus_couchianus
ENSAPEG00000023581	-	100	60.558	ENSXMAG00000023662	rbm38	98	61.111	Xiphophorus_maculatus