EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000024499 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 19532 bases
Position: chr9:566546-586077
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000034508	GTP_EFTU	PF00009.27	5.7e-63	1	1
ENSAPEP00000034512	GTP_EFTU	PF00009.27	6.2e-63	1	1
ENSAPEP00000034512	GTP_EFTU_D2	PF03144.25	3.8e-17	1	1
ENSAPEP00000034508	GTP_EFTU_D2	PF03144.25	4e-17	1	1
ENSAPEP00000034508	EFG_IV	PF03764.18	7.4e-38	1	1
ENSAPEP00000034512	EFG_IV	PF03764.18	8.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000035402	-	2154	-	ENSAPEP00000034508	717 (aa)	-	-
ENSAPET00000035406	-	3371	-	ENSAPEP00000034512	747 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000024499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000024499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000024499	gfm1	51	33.333	ENSAPEG00000008166	guf1	56	33.333
ENSAPEG00000024499	gfm1	98	34.176	ENSAPEG00000000424	gfm2	94	43.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000024499	gfm1	99	79.777	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSAPEG00000024499	gfm1	93	95.272	ENSAPOG00000016489	gfm1	99	95.272	Acanthochromis_polyacanthus
ENSAPEG00000024499	gfm1	98	80.505	ENSAMEG00000013542	GFM1	99	78.476	Ailuropoda_melanoleuca
ENSAPEG00000024499	gfm1	99	84.509	ENSACIG00000014465	gfm1	94	85.103	Amphilophus_citrinellus
ENSAPEG00000024499	gfm1	100	99.732	ENSAOCG00000006023	gfm1	100	99.732	Amphiprion_ocellaris
ENSAPEG00000024499	gfm1	100	88.904	ENSATEG00000013789	gfm1	100	88.904	Anabas_testudineus
ENSAPEG00000024499	gfm1	99	79.144	ENSAPLG00000005022	GFM1	100	79.310	Anas_platyrhynchos
ENSAPEG00000024499	gfm1	99	79.190	ENSACAG00000006829	GFM1	97	79.306	Anolis_carolinensis
ENSAPEG00000024499	gfm1	99	79.637	ENSANAG00000035983	GFM1	99	77.882	Aotus_nancymaae
ENSAPEG00000024499	gfm1	100	89.840	ENSACLG00000016586	gfm1	100	89.840	Astatotilapia_calliptera
ENSAPEG00000024499	gfm1	99	85.675	ENSAMXG00000013435	gfm1	98	85.226	Astyanax_mexicanus
ENSAPEG00000024499	gfm1	99	80.168	ENSBTAG00000027795	GFM1	95	80.785	Bos_taurus
ENSAPEG00000024499	gfm1	96	57.659	WBGene00009246	gfm-1	92	57.803	Caenorhabditis_elegans
ENSAPEG00000024499	gfm1	99	80.056	ENSCJAG00000000363	GFM1	96	80.305	Callithrix_jacchus
ENSAPEG00000024499	gfm1	98	80.926	ENSCAFG00000009006	GFM1	99	80.775	Canis_familiaris
ENSAPEG00000024499	gfm1	98	80.926	ENSCAFG00020005878	GFM1	98	81.206	Canis_lupus_dingo
ENSAPEG00000024499	gfm1	99	80.447	ENSCHIG00000015220	GFM1	95	81.066	Capra_hircus
ENSAPEG00000024499	gfm1	99	80.195	ENSTSYG00000002013	GFM1	99	78.342	Carlito_syrichta
ENSAPEG00000024499	gfm1	99	69.958	ENSCAPG00000005699	GFM1	97	70.236	Cavia_aperea
ENSAPEG00000024499	gfm1	99	79.777	ENSCPOG00000001194	GFM1	99	77.837	Cavia_porcellus
ENSAPEG00000024499	gfm1	99	79.498	ENSCCAG00000025561	GFM1	99	77.733	Cebus_capucinus
ENSAPEG00000024499	gfm1	99	79.777	ENSCATG00000037622	GFM1	99	78.284	Cercocebus_atys
ENSAPEG00000024499	gfm1	99	78.801	ENSCLAG00000002503	GFM1	95	78.918	Chinchilla_lanigera
ENSAPEG00000024499	gfm1	99	79.637	ENSCSAG00000012162	GFM1	99	78.150	Chlorocebus_sabaeus
ENSAPEG00000024499	gfm1	99	70.851	ENSCHOG00000004867	GFM1	99	69.057	Choloepus_hoffmanni
ENSAPEG00000024499	gfm1	99	81.051	ENSCPBG00000018367	GFM1	99	79.570	Chrysemys_picta_bellii
ENSAPEG00000024499	gfm1	97	58.601	ENSCING00000011960	-	93	58.881	Ciona_intestinalis
ENSAPEG00000024499	gfm1	99	59.388	ENSCSAVG00000008514	-	99	59.639	Ciona_savignyi
ENSAPEG00000024499	gfm1	99	79.637	ENSCANG00000031714	GFM1	99	78.150	Colobus_angolensis_palliatus
ENSAPEG00000024499	gfm1	99	79.749	ENSCGRG00001022095	GFM1	99	77.882	Cricetulus_griseus_chok1gshd
ENSAPEG00000024499	gfm1	99	79.749	ENSCGRG00000012043	GFM1	99	77.882	Cricetulus_griseus_crigri
ENSAPEG00000024499	gfm1	99	81.025	ENSCSEG00000017088	gfm1	99	81.604	Cynoglossus_semilaevis
ENSAPEG00000024499	gfm1	100	90.897	ENSCVAG00000004126	gfm1	100	90.897	Cyprinodon_variegatus
ENSAPEG00000024499	gfm1	100	81.016	ENSDARG00000063624	gfm1	100	81.016	Danio_rerio
ENSAPEG00000024499	gfm1	56	77.970	ENSDNOG00000016385	-	99	77.970	Dasypus_novemcinctus
ENSAPEG00000024499	gfm1	99	78.103	ENSDORG00000014165	Gfm1	97	77.069	Dipodomys_ordii
ENSAPEG00000024499	gfm1	98	67.514	FBgn0263133	mEFG1	95	67.701	Drosophila_melanogaster
ENSAPEG00000024499	gfm1	99	71.627	ENSETEG00000019197	GFM1	95	72.346	Echinops_telfairi
ENSAPEG00000024499	gfm1	93	63.150	ENSEBUG00000012794	gfm1	100	63.259	Eptatretus_burgeri
ENSAPEG00000024499	gfm1	92	65.748	ENSEEUG00000000429	GFM1	98	59.301	Erinaceus_europaeus
ENSAPEG00000024499	gfm1	100	84.091	ENSELUG00000014728	gfm1	100	84.091	Esox_lucius
ENSAPEG00000024499	gfm1	99	79.916	ENSFCAG00000013291	GFM1	99	78.238	Felis_catus
ENSAPEG00000024499	gfm1	93	79.104	ENSFALG00000007619	GFM1	99	79.403	Ficedula_albicollis
ENSAPEG00000024499	gfm1	99	80.307	ENSFDAG00000016559	GFM1	99	78.104	Fukomys_damarensis
ENSAPEG00000024499	gfm1	100	89.305	ENSFHEG00000006091	gfm1	100	89.305	Fundulus_heteroclitus
ENSAPEG00000024499	gfm1	99	84.573	ENSGMOG00000010161	gfm1	100	85.007	Gadus_morhua
ENSAPEG00000024499	gfm1	99	79.530	ENSGALG00000009634	GFM1	98	79.530	Gallus_gallus
ENSAPEG00000024499	gfm1	100	89.706	ENSGAFG00000012527	gfm1	100	89.706	Gambusia_affinis
ENSAPEG00000024499	gfm1	100	88.518	ENSGACG00000009864	gfm1	100	88.518	Gasterosteus_aculeatus
ENSAPEG00000024499	gfm1	99	80.056	ENSGGOG00000003085	GFM1	99	78.418	Gorilla_gorilla
ENSAPEG00000024499	gfm1	100	89.973	ENSHBUG00000002120	gfm1	100	89.973	Haplochromis_burtoni
ENSAPEG00000024499	gfm1	99	79.358	ENSHGLG00000016855	GFM1	99	77.303	Heterocephalus_glaber_female
ENSAPEG00000024499	gfm1	99	79.358	ENSHGLG00100013049	GFM1	99	77.303	Heterocephalus_glaber_male
ENSAPEG00000024499	gfm1	100	87.550	ENSHCOG00000007638	gfm1	99	88.571	Hippocampus_comes
ENSAPEG00000024499	gfm1	100	83.155	ENSIPUG00000005873	gfm1	100	83.155	Ictalurus_punctatus
ENSAPEG00000024499	gfm1	99	78.382	ENSSTOG00000010150	GFM1	97	78.382	Ictidomys_tridecemlineatus
ENSAPEG00000024499	gfm1	99	79.190	ENSJJAG00000016447	Gfm1	99	77.212	Jaculus_jaculus
ENSAPEG00000024499	gfm1	100	86.631	ENSKMAG00000020768	gfm1	100	86.631	Kryptolebias_marmoratus
ENSAPEG00000024499	gfm1	97	88.160	ENSLBEG00000021315	gfm1	100	88.588	Labrus_bergylta
ENSAPEG00000024499	gfm1	99	80.614	ENSLACG00000012295	GFM1	99	79.004	Latimeria_chalumnae
ENSAPEG00000024499	gfm1	99	77.531	ENSLOCG00000003778	gfm1	99	77.961	Lepisosteus_oculatus
ENSAPEG00000024499	gfm1	99	78.522	ENSLAFG00000010945	GFM1	99	77.902	Loxodonta_africana
ENSAPEG00000024499	gfm1	99	79.777	ENSMFAG00000035731	GFM1	99	78.150	Macaca_fascicularis
ENSAPEG00000024499	gfm1	99	79.777	ENSMMUG00000004961	GFM1	99	78.150	Macaca_mulatta
ENSAPEG00000024499	gfm1	99	79.637	ENSMNEG00000033245	GFM1	99	78.150	Macaca_nemestrina
ENSAPEG00000024499	gfm1	99	77.964	ENSMLEG00000030908	GFM1	99	77.959	Mandrillus_leucophaeus
ENSAPEG00000024499	gfm1	100	90.374	ENSMAMG00000011760	gfm1	100	90.374	Mastacembelus_armatus
ENSAPEG00000024499	gfm1	100	89.973	ENSMZEG00005016639	gfm1	100	89.973	Maylandia_zebra
ENSAPEG00000024499	gfm1	99	79.391	ENSMGAG00000010641	GFM1	97	79.555	Meleagris_gallopavo
ENSAPEG00000024499	gfm1	99	80.028	ENSMAUG00000000611	Gfm1	96	80.000	Mesocricetus_auratus
ENSAPEG00000024499	gfm1	99	80.056	ENSMICG00000049086	GFM1	96	80.444	Microcebus_murinus
ENSAPEG00000024499	gfm1	99	80.307	ENSMOCG00000000465	Gfm1	99	78.284	Microtus_ochrogaster
ENSAPEG00000024499	gfm1	99	87.483	ENSMMOG00000012538	gfm1	98	87.603	Mola_mola
ENSAPEG00000024499	gfm1	99	79.330	ENSMODG00000015673	GFM1	99	78.689	Monodelphis_domestica
ENSAPEG00000024499	gfm1	99	89.155	ENSMALG00000012508	gfm1	95	89.155	Monopterus_albus
ENSAPEG00000024499	gfm1	98	80.618	MGP_CAROLIEiJ_G0025052	Gfm1	94	82.200	Mus_caroli
ENSAPEG00000024499	gfm1	98	80.337	ENSMUSG00000027774	Gfm1	95	80.618	Mus_musculus
ENSAPEG00000024499	gfm1	98	80.478	MGP_PahariEiJ_G0026495	Gfm1	100	78.277	Mus_pahari
ENSAPEG00000024499	gfm1	98	80.337	MGP_SPRETEiJ_G0025994	Gfm1	94	81.800	Mus_spretus
ENSAPEG00000024499	gfm1	99	80.474	ENSMPUG00000002859	GFM1	96	80.583	Mustela_putorius_furo
ENSAPEG00000024499	gfm1	99	80.474	ENSMLUG00000000452	GFM1	96	80.583	Myotis_lucifugus
ENSAPEG00000024499	gfm1	99	79.050	ENSNGAG00000012375	Gfm1	99	77.181	Nannospalax_galili
ENSAPEG00000024499	gfm1	99	89.612	ENSNBRG00000004631	gfm1	99	89.835	Neolamprologus_brichardi
ENSAPEG00000024499	gfm1	99	79.916	ENSNLEG00000004176	GFM1	99	78.150	Nomascus_leucogenys
ENSAPEG00000024499	gfm1	94	70.088	ENSMEUG00000007784	GFM1	99	70.882	Notamacropus_eugenii
ENSAPEG00000024499	gfm1	98	79.804	ENSOPRG00000009860	GFM1	99	77.957	Ochotona_princeps
ENSAPEG00000024499	gfm1	99	80.056	ENSODEG00000004316	GFM1	99	78.104	Octodon_degus
ENSAPEG00000024499	gfm1	100	90.107	ENSONIG00000003772	gfm1	100	90.107	Oreochromis_niloticus
ENSAPEG00000024499	gfm1	99	80.195	ENSOCUG00000013561	GFM1	97	79.698	Oryctolagus_cuniculus
ENSAPEG00000024499	gfm1	98	88.418	ENSORLG00000006487	gfm1	100	88.842	Oryzias_latipes
ENSAPEG00000024499	gfm1	100	88.369	ENSORLG00020003362	gfm1	100	88.369	Oryzias_latipes_hni
ENSAPEG00000024499	gfm1	100	88.369	ENSORLG00015005829	gfm1	100	88.369	Oryzias_latipes_hsok
ENSAPEG00000024499	gfm1	100	89.840	ENSOMEG00000012894	gfm1	100	89.840	Oryzias_melastigma
ENSAPEG00000024499	gfm1	99	79.079	ENSOGAG00000008298	GFM1	96	79.334	Otolemur_garnettii
ENSAPEG00000024499	gfm1	99	79.555	ENSOARG00000002409	GFM1	99	79.555	Ovis_aries
ENSAPEG00000024499	gfm1	99	80.056	ENSPPAG00000033881	GFM1	99	78.418	Pan_paniscus
ENSAPEG00000024499	gfm1	99	79.916	ENSPPRG00000009281	GFM1	99	78.238	Panthera_pardus
ENSAPEG00000024499	gfm1	99	79.777	ENSPTIG00000012416	GFM1	99	78.104	Panthera_tigris_altaica
ENSAPEG00000024499	gfm1	99	80.056	ENSPTRG00000015570	GFM1	99	78.418	Pan_troglodytes
ENSAPEG00000024499	gfm1	99	79.637	ENSPANG00000016512	GFM1	99	78.150	Papio_anubis
ENSAPEG00000024499	gfm1	99	83.543	ENSPKIG00000004876	gfm1	99	82.907	Paramormyrops_kingsleyae
ENSAPEG00000024499	gfm1	99	81.466	ENSPSIG00000012567	GFM1	99	79.840	Pelodiscus_sinensis
ENSAPEG00000024499	gfm1	99	85.118	ENSPMGG00000014068	gfm1	100	85.241	Periophthalmus_magnuspinnatus
ENSAPEG00000024499	gfm1	99	79.469	ENSPEMG00000008942	Gfm1	99	77.480	Peromyscus_maniculatus_bairdii
ENSAPEG00000024499	gfm1	88	76.378	ENSPCIG00000020195	GFM1	96	78.827	Phascolarctos_cinereus
ENSAPEG00000024499	gfm1	100	89.572	ENSPFOG00000011022	gfm1	100	89.572	Poecilia_formosa
ENSAPEG00000024499	gfm1	99	89.335	ENSPLAG00000019585	gfm1	100	89.185	Poecilia_latipinna
ENSAPEG00000024499	gfm1	100	89.439	ENSPMEG00000012376	gfm1	100	89.439	Poecilia_mexicana
ENSAPEG00000024499	gfm1	100	89.706	ENSPREG00000001332	gfm1	95	89.706	Poecilia_reticulata
ENSAPEG00000024499	gfm1	99	79.498	ENSPPYG00000014244	GFM1	99	77.882	Pongo_abelii
ENSAPEG00000024499	gfm1	97	77.952	ENSPCAG00000008934	GFM1	100	78.378	Procavia_capensis
ENSAPEG00000024499	gfm1	99	79.777	ENSPCOG00000022259	GFM1	99	77.704	Propithecus_coquereli
ENSAPEG00000024499	gfm1	99	78.661	ENSPVAG00000013605	GFM1	96	78.918	Pteropus_vampyrus
ENSAPEG00000024499	gfm1	100	89.706	ENSPNYG00000006037	gfm1	100	89.706	Pundamilia_nyererei
ENSAPEG00000024499	gfm1	99	84.626	ENSPNAG00000001237	gfm1	100	83.556	Pygocentrus_nattereri
ENSAPEG00000024499	gfm1	99	79.888	ENSRNOG00000012873	Gfm1	96	79.861	Rattus_norvegicus
ENSAPEG00000024499	gfm1	99	79.498	ENSRBIG00000031363	GFM1	99	78.016	Rhinopithecus_bieti
ENSAPEG00000024499	gfm1	99	79.637	ENSRROG00000031081	GFM1	99	78.150	Rhinopithecus_roxellana
ENSAPEG00000024499	gfm1	95	56.997	YLR069C	-	90	56.997	Saccharomyces_cerevisiae
ENSAPEG00000024499	gfm1	99	79.777	ENSSBOG00000023252	GFM1	99	78.016	Saimiri_boliviensis_boliviensis
ENSAPEG00000024499	gfm1	99	80.726	ENSSHAG00000017772	GFM1	96	80.726	Sarcophilus_harrisii
ENSAPEG00000024499	gfm1	99	82.869	ENSSFOG00015003117	gfm1	99	82.869	Scleropages_formosus
ENSAPEG00000024499	gfm1	100	89.840	ENSSMAG00000013221	gfm1	100	89.840	Scophthalmus_maximus
ENSAPEG00000024499	gfm1	100	90.241	ENSSDUG00000018665	gfm1	100	90.241	Seriola_dumerili
ENSAPEG00000024499	gfm1	100	90.107	ENSSLDG00000020606	gfm1	100	90.107	Seriola_lalandi_dorsalis
ENSAPEG00000024499	gfm1	99	78.273	ENSSPUG00000018686	GFM1	99	76.839	Sphenodon_punctatus
ENSAPEG00000024499	gfm1	100	92.380	ENSSPAG00000008800	gfm1	100	92.380	Stegastes_partitus
ENSAPEG00000024499	gfm1	99	79.330	ENSSSCG00000025651	GFM1	95	79.944	Sus_scrofa
ENSAPEG00000024499	gfm1	100	87.032	ENSTRUG00000009244	gfm1	100	87.032	Takifugu_rubripes
ENSAPEG00000024499	gfm1	100	87.834	ENSTNIG00000007729	gfm1	100	87.834	Tetraodon_nigroviridis
ENSAPEG00000024499	gfm1	92	71.194	ENSTBEG00000017404	GFM1	89	71.493	Tupaia_belangeri
ENSAPEG00000024499	gfm1	99	79.888	ENSTTRG00000001735	GFM1	95	79.888	Tursiops_truncatus
ENSAPEG00000024499	gfm1	99	80.195	ENSUAMG00000026381	GFM1	96	80.305	Ursus_americanus
ENSAPEG00000024499	gfm1	99	80.195	ENSUMAG00000011268	GFM1	96	80.305	Ursus_maritimus
ENSAPEG00000024499	gfm1	99	76.816	ENSVPAG00000009444	GFM1	96	76.667	Vicugna_pacos
ENSAPEG00000024499	gfm1	98	80.872	ENSVVUG00000020091	GFM1	99	80.477	Vulpes_vulpes
ENSAPEG00000024499	gfm1	99	82.730	ENSXETG00000032551	GFM1	99	80.589	Xenopus_tropicalis
ENSAPEG00000024499	gfm1	53	89.147	ENSXCOG00000012590	gfm1	93	87.841	Xiphophorus_couchianus
ENSAPEG00000024499	gfm1	100	89.171	ENSXMAG00000000261	gfm1	100	89.171	Xiphophorus_maculatus