EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSAPLG00000001216 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: -
Full Name: splicing factor 3B subunit 4
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 357 bases
Position: chrKB744918.1:16079-16435
Accession: 101793919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000000633	RRM_1	PF00076.22	3.3e-29	1	2
ENSAPLP00000000633	RRM_1	PF00076.22	3.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000001202	SF3B4-201	357	XM_005029682	ENSAPLP00000000633	119 (aa)	XP_005029739	U3I063

Gene Model

Click here to download ENSAPLG00000001216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000001216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000001216	SF3B4	99	45.833	ENSAPLG00000009729	-	57	45.833
ENSAPLG00000001216	SF3B4	99	40.000	ENSAPLG00000008415	PABPC1L	56	40.000
ENSAPLG00000001216	SF3B4	99	33.333	ENSAPLG00000009953	TIA1	58	33.333
ENSAPLG00000001216	SF3B4	99	37.500	ENSAPLG00000009088	TIAL1	55	37.500
ENSAPLG00000001216	SF3B4	99	43.519	ENSAPLG00000001129	PABPC1	52	43.519
ENSAPLG00000001216	SF3B4	97	35.135	ENSAPLG00000003139	ELAVL1	56	35.135