EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000001640 (Gene tree)
Gene ID: -
Gene Symbol: ARF6
Alias: -
Full Name: ADP ribosylation factor 6
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 540 bases
Position: chrKB742921.1:474615-475154
Accession: 101801257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000001060	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000001631	ARF6-201	540	XM_005017400	ENSAPLP00000001060	179 (aa)	XP_005017457	R0LMH9

Gene Model

Click here to download ENSAPLG00000001640's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000001640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000001640	ARF6	94	44.048	ENSAPLG00000013500	ARL5B	92	44.048
ENSAPLG00000001640	ARF6	93	33.333	ENSAPLG00000007369	SAR1A	87	33.333
ENSAPLG00000001640	ARF6	89	66.875	ENSAPLG00000009129	ARF4	94	66.875
ENSAPLG00000001640	ARF6	65	30.252	ENSAPLG00000010775	RAB35	59	30.252
ENSAPLG00000001640	ARF6	95	43.750	ENSAPLG00000001404	ARL4A	86	43.750
ENSAPLG00000001640	ARF6	93	43.713	ENSAPLG00000009182	ARL5A	90	43.713
ENSAPLG00000001640	ARF6	95	43.182	ENSAPLG00000015708	ARL4C	90	43.182
ENSAPLG00000001640	ARF6	98	53.977	ENSAPLG00000016092	ARL1	95	53.977
ENSAPLG00000001640	ARF6	75	37.313	ENSAPLG00000014491	SAR1B	66	37.313
ENSAPLG00000001640	ARF6	100	65.574	ENSAPLG00000004509	ARF1	94	65.574
ENSAPLG00000001640	ARF6	94	38.824	ENSAPLG00000004069	ARL6	90	38.824
ENSAPLG00000001640	ARF6	94	43.787	ENSAPLG00000016017	ARL3	91	43.787
ENSAPLG00000001640	ARF6	93	33.140	ENSAPLG00000014398	ARFRP1	86	33.140
ENSAPLG00000001640	ARF6	97	43.182	ENSAPLG00000001749	ARL14	90	43.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000001640	ARF6	100	96.648	ENSACAG00000001335	ARF6	100	96.648	Anolis_carolinensis
ENSAPLG00000001640	ARF6	96	95.906	ENSLBEG00000024782	ARF6	92	95.906	Labrus_bergylta
ENSAPLG00000001640	ARF6	85	97.368	ENSMFAG00000001534	ARF6	100	97.368	Macaca_fascicularis
ENSAPLG00000001640	ARF6	85	97.368	ENSMNEG00000035341	ARF6	100	97.368	Macaca_nemestrina
ENSAPLG00000001640	ARF6	99	66.304	ENSPMAG00000010222	ARF6	99	66.304	Petromyzon_marinus
ENSAPLG00000001640	ARF6	79	96.454	ENSPVAG00000017937	ARF6	100	96.454	Pteropus_vampyrus
ENSAPLG00000001640	ARF6	85	97.368	ENSSMAG00000006815	ARF6	100	97.368	Scophthalmus_maximus
ENSAPLG00000001640	ARF6	85	97.368	ENSSSCG00000005012	ARF6	100	97.368	Sus_scrofa
ENSAPLG00000001640	ARF6	100	94.413	ENSTNIG00000019582	arf6b	100	94.413	Tetraodon_nigroviridis
ENSAPLG00000001640	ARF6	85	97.386	ENSUMAG00000007345	ARF6	99	97.386	Ursus_maritimus
ENSAPLG00000001640	ARF6	85	97.386	ENSVVUG00000029816	ARF6	90	97.386	Vulpes_vulpes