EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000002054 (Gene tree)
Gene ID: -
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 840 bases
Position: chrKB742957.1:392381-393220
Accession: 101793209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000001477	Ribosomal_L7Ae	PF01248.26	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000002051	RPP38-201	840	XM_005017883	ENSAPLP00000001477	280 (aa)	XP_005017940	U3I2K7

Gene Model

Click here to download ENSAPLG00000002054's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03008	Ribosome biogenesis in eukaryotes	KEGG
apla03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002054	RPP38	96	51.986	ENSG00000152464	RPP38	95	54.321	Homo_sapiens
ENSAPLG00000002054	RPP38	90	44.574	ENSAPOG00000001240	rpp38	90	42.164	Acanthochromis_polyacanthus
ENSAPLG00000002054	RPP38	96	53.285	ENSAMEG00000018832	RPP38	91	52.290	Ailuropoda_melanoleuca
ENSAPLG00000002054	RPP38	90	39.689	ENSACIG00000011592	rpp38	95	41.045	Amphilophus_citrinellus
ENSAPLG00000002054	RPP38	90	42.379	ENSAOCG00000017293	rpp38	90	42.537	Amphiprion_ocellaris
ENSAPLG00000002054	RPP38	90	45.059	ENSAPEG00000002315	rpp38	90	44.841	Amphiprion_percula
ENSAPLG00000002054	RPP38	90	42.636	ENSATEG00000000731	rpp38	91	41.923	Anabas_testudineus
ENSAPLG00000002054	RPP38	90	41.245	ENSACLG00000016958	rpp38	90	41.634	Astatotilapia_calliptera
ENSAPLG00000002054	RPP38	90	41.245	ENSACLG00000016962	rpp38	90	41.634	Astatotilapia_calliptera
ENSAPLG00000002054	RPP38	89	45.161	ENSAMXG00000025023	rpp38	88	43.254	Astyanax_mexicanus
ENSAPLG00000002054	RPP38	97	48.029	ENSBTAG00000007702	RPP38	91	47.170	Bos_taurus
ENSAPLG00000002054	RPP38	96	51.460	ENSCAFG00000024373	RPP38	91	50.763	Canis_familiaris
ENSAPLG00000002054	RPP38	96	51.460	ENSCAFG00020008008	RPP38	91	50.763	Canis_lupus_dingo
ENSAPLG00000002054	RPP38	97	48.029	ENSCHIG00000012484	RPP38	91	47.170	Capra_hircus
ENSAPLG00000002054	RPP38	96	50.909	ENSCPOG00000003981	RPP38	92	49.810	Cavia_porcellus
ENSAPLG00000002054	RPP38	96	52.727	ENSCLAG00000010194	RPP38	92	51.711	Chinchilla_lanigera
ENSAPLG00000002054	RPP38	91	50.385	ENSCSAG00000019055	RPP38	91	50.763	Chlorocebus_sabaeus
ENSAPLG00000002054	RPP38	96	54.909	ENSCHOG00000004335	RPP38	92	54.373	Choloepus_hoffmanni
ENSAPLG00000002054	RPP38	96	48.889	ENSCGRG00001001395	Rpp38	91	48.062	Cricetulus_griseus_chok1gshd
ENSAPLG00000002054	RPP38	96	48.889	ENSCGRG00000017441	Rpp38	91	48.062	Cricetulus_griseus_crigri
ENSAPLG00000002054	RPP38	90	42.023	ENSCSEG00000001721	rpp38	91	41.797	Cynoglossus_semilaevis
ENSAPLG00000002054	RPP38	88	42.636	ENSCVAG00000001676	rpp38	90	39.847	Cyprinodon_variegatus
ENSAPLG00000002054	RPP38	96	41.697	ENSDARG00000040350	rpp38	94	39.850	Danio_rerio
ENSAPLG00000002054	RPP38	96	53.285	ENSDNOG00000040314	RPP38	91	52.290	Dasypus_novemcinctus
ENSAPLG00000002054	RPP38	96	50.370	ENSDORG00000009783	Rpp38	91	49.231	Dipodomys_ordii
ENSAPLG00000002054	RPP38	96	52.574	ENSETEG00000002839	RPP38	91	50.579	Echinops_telfairi
ENSAPLG00000002054	RPP38	96	51.095	ENSEASG00005019783	RPP38	90	49.042	Equus_asinus_asinus
ENSAPLG00000002054	RPP38	98	49.825	ENSEEUG00000014677	RPP38	91	48.889	Erinaceus_europaeus
ENSAPLG00000002054	RPP38	93	41.053	ENSELUG00000010160	rpp38	95	40.636	Esox_lucius
ENSAPLG00000002054	RPP38	96	51.460	ENSFCAG00000022449	RPP38	91	50.382	Felis_catus
ENSAPLG00000002054	RPP38	100	79.078	ENSFALG00000014804	RPP38	98	79.078	Ficedula_albicollis
ENSAPLG00000002054	RPP38	96	53.455	ENSFDAG00000018669	RPP38	92	52.091	Fukomys_damarensis
ENSAPLG00000002054	RPP38	90	44.195	ENSFHEG00000013741	rpp38	90	43.233	Fundulus_heteroclitus
ENSAPLG00000002054	RPP38	99	83.094	ENSGALG00000008794	RPP38	95	83.094	Gallus_gallus
ENSAPLG00000002054	RPP38	53	45.395	ENSGACG00000009258	rpp38	90	45.033	Gasterosteus_aculeatus
ENSAPLG00000002054	RPP38	90	40.996	ENSHBUG00000010937	rpp38	90	41.245	Haplochromis_burtoni
ENSAPLG00000002054	RPP38	96	52.727	ENSHGLG00000012144	RPP38	92	50.951	Heterocephalus_glaber_female
ENSAPLG00000002054	RPP38	89	41.767	ENSIPUG00000022879	rpp38	92	42.146	Ictalurus_punctatus
ENSAPLG00000002054	RPP38	96	50.183	ENSSTOG00000025699	RPP38	89	49.042	Ictidomys_tridecemlineatus
ENSAPLG00000002054	RPP38	96	51.471	ENSJJAG00000007523	Rpp38	91	50.769	Jaculus_jaculus
ENSAPLG00000002054	RPP38	90	39.313	ENSKMAG00000003986	rpp38	89	41.923	Kryptolebias_marmoratus
ENSAPLG00000002054	RPP38	90	40.310	ENSLBEG00000006853	rpp38	89	39.300	Labrus_bergylta
ENSAPLG00000002054	RPP38	95	44.326	ENSLACG00000006502	RPP38	94	44.604	Latimeria_chalumnae
ENSAPLG00000002054	RPP38	98	41.869	ENSLOCG00000018347	rpp38	94	40.860	Lepisosteus_oculatus
ENSAPLG00000002054	RPP38	97	50.545	ENSLAFG00000000509	RPP38	93	49.430	Loxodonta_africana
ENSAPLG00000002054	RPP38	91	49.615	ENSMMUG00000007679	RPP38	91	50.000	Macaca_mulatta
ENSAPLG00000002054	RPP38	90	44.747	ENSMAMG00000012774	rpp38	88	43.825	Mastacembelus_armatus
ENSAPLG00000002054	RPP38	90	41.634	ENSMZEG00005003189	rpp38	90	42.023	Maylandia_zebra
ENSAPLG00000002054	RPP38	90	41.245	ENSMZEG00005003200	rpp38	90	41.634	Maylandia_zebra
ENSAPLG00000002054	RPP38	99	85.252	ENSMGAG00000008217	RPP38	95	85.252	Meleagris_gallopavo
ENSAPLG00000002054	RPP38	96	47.037	ENSMAUG00000003644	Rpp38	91	46.124	Mesocricetus_auratus
ENSAPLG00000002054	RPP38	96	48.897	ENSMOCG00000007020	Rpp38	91	47.692	Microtus_ochrogaster
ENSAPLG00000002054	RPP38	90	37.891	ENSMMOG00000003446	rpp38	88	38.911	Mola_mola
ENSAPLG00000002054	RPP38	93	55.344	ENSMODG00000024091	RPP38	93	55.344	Monodelphis_domestica
ENSAPLG00000002054	RPP38	90	42.537	ENSMALG00000002356	rpp38	89	41.221	Monopterus_albus
ENSAPLG00000002054	RPP38	96	48.519	MGP_CAROLIEiJ_G0023133	Rpp38	91	48.062	Mus_caroli
ENSAPLG00000002054	RPP38	96	49.259	ENSMUSG00000049950	Rpp38	91	48.450	Mus_musculus
ENSAPLG00000002054	RPP38	96	48.519	MGP_PahariEiJ_G0019193	Rpp38	91	47.674	Mus_pahari
ENSAPLG00000002054	RPP38	96	49.259	MGP_SPRETEiJ_G0024051	Rpp38	91	48.450	Mus_spretus
ENSAPLG00000002054	RPP38	96	53.430	ENSMPUG00000018523	RPP38	92	52.453	Mustela_putorius_furo
ENSAPLG00000002054	RPP38	91	48.263	ENSMLUG00000002153	RPP38	91	49.808	Myotis_lucifugus
ENSAPLG00000002054	RPP38	96	48.718	ENSNGAG00000011066	Rpp38	92	48.106	Nannospalax_galili
ENSAPLG00000002054	RPP38	90	41.860	ENSNBRG00000006994	rpp38	91	41.634	Neolamprologus_brichardi
ENSAPLG00000002054	RPP38	90	40.784	ENSONIG00000020467	rpp38	89	42.023	Oreochromis_niloticus
ENSAPLG00000002054	RPP38	91	52.344	ENSOCUG00000024367	-	91	52.326	Oryctolagus_cuniculus
ENSAPLG00000002054	RPP38	91	51.953	ENSOCUG00000022768	-	91	51.938	Oryctolagus_cuniculus
ENSAPLG00000002054	RPP38	91	44.828	ENSORLG00000009219	rpp38	91	44.444	Oryzias_latipes
ENSAPLG00000002054	RPP38	90	44.061	ENSORLG00020011503	rpp38	86	45.136	Oryzias_latipes_hni
ENSAPLG00000002054	RPP38	90	45.349	ENSORLG00015017702	rpp38	86	45.136	Oryzias_latipes_hsok
ENSAPLG00000002054	RPP38	88	42.745	ENSOMEG00000005414	rpp38	90	43.462	Oryzias_melastigma
ENSAPLG00000002054	RPP38	96	51.095	ENSOGAG00000008059	RPP38	91	50.000	Otolemur_garnettii
ENSAPLG00000002054	RPP38	97	48.029	ENSOARG00000004534	RPP38	91	48.289	Ovis_aries
ENSAPLG00000002054	RPP38	96	52.708	ENSPPAG00000041577	RPP38	83	51.698	Pan_paniscus
ENSAPLG00000002054	RPP38	96	51.825	ENSPPRG00000015329	RPP38	91	50.763	Panthera_pardus
ENSAPLG00000002054	RPP38	96	51.460	ENSPTIG00000007188	RPP38	91	50.382	Panthera_tigris_altaica
ENSAPLG00000002054	RPP38	96	52.708	ENSPTRG00000002318	RPP38	83	51.698	Pan_troglodytes
ENSAPLG00000002054	RPP38	94	38.909	ENSPKIG00000025652	rpp38	89	39.163	Paramormyrops_kingsleyae
ENSAPLG00000002054	RPP38	99	61.071	ENSPSIG00000001527	RPP38	94	60.526	Pelodiscus_sinensis
ENSAPLG00000002054	RPP38	96	51.103	ENSPEMG00000008375	Rpp38	92	50.570	Peromyscus_maniculatus_bairdii
ENSAPLG00000002054	RPP38	96	54.412	ENSPCIG00000009096	RPP38	87	53.846	Phascolarctos_cinereus
ENSAPLG00000002054	RPP38	74	45.833	ENSPFOG00000016823	rpp38	92	46.734	Poecilia_formosa
ENSAPLG00000002054	RPP38	92	42.910	ENSPLAG00000007626	rpp38	89	42.353	Poecilia_latipinna
ENSAPLG00000002054	RPP38	88	40.392	ENSPMEG00000020392	rpp38	88	39.370	Poecilia_mexicana
ENSAPLG00000002054	RPP38	92	44.403	ENSPREG00000017744	rpp38	91	43.922	Poecilia_reticulata
ENSAPLG00000002054	RPP38	96	51.625	ENSPPYG00000002113	RPP38	92	50.943	Pongo_abelii
ENSAPLG00000002054	RPP38	91	50.192	ENSPVAG00000007155	RPP38	91	50.190	Pteropus_vampyrus
ENSAPLG00000002054	RPP38	90	41.634	ENSPNYG00000004293	rpp38	90	42.023	Pundamilia_nyererei
ENSAPLG00000002054	RPP38	89	41.935	ENSPNAG00000010633	rpp38	91	40.234	Pygocentrus_nattereri
ENSAPLG00000002054	RPP38	95	49.815	ENSRNOG00000038025	Rpp38	91	47.148	Rattus_norvegicus
ENSAPLG00000002054	RPP38	96	56.618	ENSSHAG00000015529	RPP38	94	56.274	Sarcophilus_harrisii
ENSAPLG00000002054	RPP38	90	43.307	ENSSMAG00000018276	rpp38	88	43.548	Scophthalmus_maximus
ENSAPLG00000002054	RPP38	88	43.254	ENSSDUG00000001651	rpp38	89	44.444	Seriola_dumerili
ENSAPLG00000002054	RPP38	88	44.444	ENSSLDG00000014355	rpp38	89	44.841	Seriola_lalandi_dorsalis
ENSAPLG00000002054	RPP38	96	41.328	ENSSARG00000012099	RPP38	89	39.689	Sorex_araneus
ENSAPLG00000002054	RPP38	95	53.903	ENSSPUG00000008560	-	91	52.918	Sphenodon_punctatus
ENSAPLG00000002054	RPP38	99	57.194	ENSSPUG00000018363	-	94	56.391	Sphenodon_punctatus
ENSAPLG00000002054	RPP38	99	56.475	ENSSPUG00000005237	-	93	55.639	Sphenodon_punctatus
ENSAPLG00000002054	RPP38	90	43.137	ENSSPAG00000020387	rpp38	89	42.913	Stegastes_partitus
ENSAPLG00000002054	RPP38	97	51.071	ENSSSCG00000027110	RPP38	92	50.000	Sus_scrofa
ENSAPLG00000002054	RPP38	99	79.643	ENSTGUG00000001366	RPP38	100	79.643	Taeniopygia_guttata
ENSAPLG00000002054	RPP38	88	43.478	ENSTNIG00000001334	rpp38	89	43.478	Tetraodon_nigroviridis
ENSAPLG00000002054	RPP38	97	50.903	ENSTTRG00000004420	RPP38	91	49.810	Tursiops_truncatus
ENSAPLG00000002054	RPP38	96	53.285	ENSUAMG00000002618	RPP38	91	52.672	Ursus_americanus
ENSAPLG00000002054	RPP38	96	52.174	ENSUMAG00000012382	RPP38	92	52.652	Ursus_maritimus
ENSAPLG00000002054	RPP38	96	51.460	ENSVVUG00000005272	RPP38	91	50.382	Vulpes_vulpes
ENSAPLG00000002054	RPP38	92	47.744	ENSXETG00000003419	rpp38	93	47.348	Xenopus_tropicalis