EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000002469 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 12606 bases
Position: chrKB743356.1:671199-683804
Accession: 101794750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000001914	RRM_1	PF00076.22	3.3e-34	1	2
ENSAPLP00000001914	RRM_1	PF00076.22	3.3e-34	2	2
ENSAPLP00000001914	RRM_3	PF08777.11	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000002493	-	771	XM_005022391	ENSAPLP00000001914	256 (aa)	XP_005022448	U3I3U3

Gene Model

Click here to download ENSAPLG00000002469's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG
apla05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000002469	-	69	66.851	ENSAPLG00000014681	SRSF5	67	69.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002469	-	70	75.806	ENSAPOG00000017395	srsf5a	62	77.957	Acanthochromis_polyacanthus
ENSAPLG00000002469	-	95	66.802	ENSACIG00000011892	srsf5a	96	72.059	Amphilophus_citrinellus
ENSAPLG00000002469	-	70	74.595	ENSAOCG00000014967	srsf5a	62	78.378	Amphiprion_ocellaris
ENSAPLG00000002469	-	70	74.595	ENSAPEG00000009297	srsf5a	62	78.378	Amphiprion_percula
ENSAPLG00000002469	-	70	76.190	ENSATEG00000000198	srsf5a	65	77.778	Anabas_testudineus
ENSAPLG00000002469	-	70	84.444	ENSACAG00000029015	-	68	85.000	Anolis_carolinensis
ENSAPLG00000002469	-	70	72.539	ENSACLG00000027166	srsf5a	65	73.575	Astatotilapia_calliptera
ENSAPLG00000002469	-	70	78.075	ENSAMXG00000030476	srsf5a	67	78.610	Astyanax_mexicanus
ENSAPLG00000002469	-	89	85.652	ENSCPBG00000021518	-	89	86.087	Chrysemys_picta_bellii
ENSAPLG00000002469	-	70	53.535	ENSCSAVG00000011376	-	78	55.051	Ciona_savignyi
ENSAPLG00000002469	-	70	72.821	ENSCSEG00000008109	srsf5a	62	73.846	Cynoglossus_semilaevis
ENSAPLG00000002469	-	68	68.421	ENSCVAG00000016982	srsf5a	96	66.667	Cyprinodon_variegatus
ENSAPLG00000002469	-	71	77.368	ENSDARG00000029818	srsf5a	100	76.296	Danio_rerio
ENSAPLG00000002469	-	70	73.333	ENSELUG00000020439	srsf5a	62	75.385	Esox_lucius
ENSAPLG00000002469	-	70	97.207	ENSFALG00000005098	-	64	97.191	Ficedula_albicollis
ENSAPLG00000002469	-	70	70.225	ENSFHEG00000003955	srsf5a	97	61.905	Fundulus_heteroclitus
ENSAPLG00000002469	-	70	76.536	ENSGMOG00000000869	srsf5a	94	73.596	Gadus_morhua
ENSAPLG00000002469	-	70	97.191	ENSGALG00000033259	SRSF5A	63	97.191	Gallus_gallus
ENSAPLG00000002469	-	70	69.663	ENSGAFG00000018237	srsf5a	54	69.663	Gambusia_affinis
ENSAPLG00000002469	-	70	77.222	ENSGACG00000011761	srsf5a	70	77.778	Gasterosteus_aculeatus
ENSAPLG00000002469	-	89	85.217	ENSGAGG00000007312	-	89	85.652	Gopherus_agassizii
ENSAPLG00000002469	-	70	72.917	ENSHBUG00000014048	srsf5a	64	73.958	Haplochromis_burtoni
ENSAPLG00000002469	-	70	75.000	ENSHCOG00000017557	srsf5a	62	76.064	Hippocampus_comes
ENSAPLG00000002469	-	70	76.042	ENSIPUG00000003439	srsf5a	75	69.524	Ictalurus_punctatus
ENSAPLG00000002469	-	70	70.000	ENSKMAG00000014937	srsf5a	58	70.984	Kryptolebias_marmoratus
ENSAPLG00000002469	-	70	71.066	ENSLBEG00000017153	srsf5a	74	71.066	Labrus_bergylta
ENSAPLG00000002469	-	70	79.670	ENSLACG00000017874	-	70	80.769	Latimeria_chalumnae
ENSAPLG00000002469	-	70	78.142	ENSMAMG00000000192	srsf5a	65	79.235	Mastacembelus_armatus
ENSAPLG00000002469	-	70	72.917	ENSMZEG00005010485	srsf5a	64	73.958	Maylandia_zebra
ENSAPLG00000002469	-	100	92.251	ENSMGAG00000011888	-	96	96.273	Meleagris_gallopavo
ENSAPLG00000002469	-	70	79.121	ENSMMOG00000009793	srsf5a	61	80.220	Mola_mola
ENSAPLG00000002469	-	70	76.404	ENSMALG00000021194	srsf5a	63	76.404	Monopterus_albus
ENSAPLG00000002469	-	70	73.298	ENSNBRG00000000771	srsf5a	64	74.346	Neolamprologus_brichardi
ENSAPLG00000002469	-	70	73.298	ENSONIG00000019583	srsf5a	64	74.346	Oreochromis_niloticus
ENSAPLG00000002469	-	71	72.021	ENSORLG00000009268	srsf5a	67	77.049	Oryzias_latipes
ENSAPLG00000002469	-	71	72.021	ENSORLG00020003281	srsf5	67	77.049	Oryzias_latipes_hni
ENSAPLG00000002469	-	71	72.021	ENSORLG00015023075	srsf5	67	77.049	Oryzias_latipes_hsok
ENSAPLG00000002469	-	70	76.923	ENSOMEG00000000628	srsf5a	66	78.022	Oryzias_melastigma
ENSAPLG00000002469	-	70	77.128	ENSPKIG00000002054	srsf5a	68	77.128	Paramormyrops_kingsleyae
ENSAPLG00000002469	-	100	84.109	ENSPSIG00000008238	-	89	86.463	Pelodiscus_sinensis
ENSAPLG00000002469	-	70	72.193	ENSPMGG00000020125	srsf5a	55	75.135	Periophthalmus_magnuspinnatus
ENSAPLG00000002469	-	70	69.430	ENSPFOG00000022993	srsf5a	60	70.466	Poecilia_formosa
ENSAPLG00000002469	-	69	69.271	ENSPLAG00000005508	srsf5a	59	70.312	Poecilia_latipinna
ENSAPLG00000002469	-	70	69.430	ENSPMEG00000016339	srsf5a	60	70.466	Poecilia_mexicana
ENSAPLG00000002469	-	70	69.072	ENSPREG00000018091	srsf5a	61	70.103	Poecilia_reticulata
ENSAPLG00000002469	-	70	72.917	ENSPNYG00000021245	srsf5a	64	73.958	Pundamilia_nyererei
ENSAPLG00000002469	-	70	77.957	ENSPNAG00000021333	srsf5a	66	78.495	Pygocentrus_nattereri
ENSAPLG00000002469	-	70	77.660	ENSSFOG00015008377	srsf5	66	77.128	Scleropages_formosus
ENSAPLG00000002469	-	70	70.297	ENSSMAG00000010899	srsf5a	66	70.297	Scophthalmus_maximus
ENSAPLG00000002469	-	70	75.543	ENSSDUG00000006103	srsf5a	63	78.804	Seriola_dumerili
ENSAPLG00000002469	-	70	75.543	ENSSLDG00000004146	srsf5a	63	78.804	Seriola_lalandi_dorsalis
ENSAPLG00000002469	-	95	77.510	ENSSPUG00000002052	-	89	81.116	Sphenodon_punctatus
ENSAPLG00000002469	-	70	75.135	ENSSPAG00000002821	srsf5a	63	78.378	Stegastes_partitus
ENSAPLG00000002469	-	93	87.308	ENSTGUG00000011492	-	96	86.400	Taeniopygia_guttata
ENSAPLG00000002469	-	70	73.711	ENSTRUG00000022908	srsf5a	65	74.742	Takifugu_rubripes
ENSAPLG00000002469	-	100	71.642	ENSXETG00000017937	srsf5a	72	78.947	Xenopus_tropicalis
ENSAPLG00000002469	-	70	68.783	ENSXCOG00000015338	srsf5a	61	71.429	Xiphophorus_couchianus
ENSAPLG00000002469	-	70	68.718	ENSXMAG00000012823	srsf5a	61	69.744	Xiphophorus_maculatus