EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000002509 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 32738 bases
Position: chrKB742951.1:105775-138512
Accession: 101801974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000002038	RRM_1	PF00076.22	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000002619	SCAF4-201	3240	XM_005017846	ENSAPLP00000002038	1079 (aa)	-	U3I467

Gene Model

Click here to download ENSAPLG00000002509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002509	SCAF4	59	83.308	ENSG00000156304	SCAF4	99	75.413	Homo_sapiens
ENSAPLG00000002509	SCAF4	78	54.472	ENSAOCG00000000615	scaf4a	58	59.040	Amphiprion_ocellaris
ENSAPLG00000002509	SCAF4	94	78.072	ENSACAG00000002569	SCAF4	89	78.072	Anolis_carolinensis
ENSAPLG00000002509	SCAF4	59	83.461	ENSANAG00000037494	SCAF4	99	75.347	Aotus_nancymaae
ENSAPLG00000002509	SCAF4	93	51.318	ENSAMXG00000008585	scaf4a	86	62.162	Astyanax_mexicanus
ENSAPLG00000002509	SCAF4	59	83.488	ENSBTAG00000018855	SCAF4	100	75.416	Bos_taurus
ENSAPLG00000002509	SCAF4	59	83.742	ENSCJAG00000008993	SCAF4	99	80.941	Callithrix_jacchus
ENSAPLG00000002509	SCAF4	59	83.696	ENSCAFG00000008863	SCAF4	100	76.383	Canis_familiaris
ENSAPLG00000002509	SCAF4	58	80.408	ENSCAFG00020026019	SCAF4	100	73.767	Canis_lupus_dingo
ENSAPLG00000002509	SCAF4	59	82.040	ENSCHIG00000008385	SCAF4	99	75.109	Capra_hircus
ENSAPLG00000002509	SCAF4	59	85.331	ENSTSYG00000011344	SCAF4	99	77.180	Carlito_syrichta
ENSAPLG00000002509	SCAF4	59	81.970	ENSCPOG00000012443	SCAF4	99	74.061	Cavia_porcellus
ENSAPLG00000002509	SCAF4	59	83.589	ENSCCAG00000033727	SCAF4	99	75.631	Cebus_capucinus
ENSAPLG00000002509	SCAF4	58	85.103	ENSCATG00000030379	SCAF4	100	75.284	Cercocebus_atys
ENSAPLG00000002509	SCAF4	81	72.959	ENSCLAG00000006298	SCAF4	100	73.834	Chinchilla_lanigera
ENSAPLG00000002509	SCAF4	59	82.722	ENSCSAG00000009438	SCAF4	99	75.065	Chlorocebus_sabaeus
ENSAPLG00000002509	SCAF4	59	83.308	ENSCANG00000029847	SCAF4	99	75.478	Colobus_angolensis_palliatus
ENSAPLG00000002509	SCAF4	59	70.902	ENSCGRG00001020821	Scaf4	100	68.152	Cricetulus_griseus_chok1gshd
ENSAPLG00000002509	SCAF4	59	70.467	ENSCGRG00000014360	Scaf4	99	74.124	Cricetulus_griseus_crigri
ENSAPLG00000002509	SCAF4	86	49.144	ENSCSEG00000019549	scaf4a	57	53.125	Cynoglossus_semilaevis
ENSAPLG00000002509	SCAF4	60	77.660	ENSDNOG00000019014	SCAF4	94	72.378	Dasypus_novemcinctus
ENSAPLG00000002509	SCAF4	60	65.106	ENSETEG00000000583	SCAF4	99	64.455	Echinops_telfairi
ENSAPLG00000002509	SCAF4	59	83.410	ENSEASG00005007756	SCAF4	99	76.157	Equus_asinus_asinus
ENSAPLG00000002509	SCAF4	59	83.410	ENSECAG00000014248	SCAF4	99	76.091	Equus_caballus
ENSAPLG00000002509	SCAF4	50	52.117	ENSELUG00000002779	SCAF8	68	69.343	Esox_lucius
ENSAPLG00000002509	SCAF4	59	82.648	ENSFCAG00000002228	SCAF4	99	75.694	Felis_catus
ENSAPLG00000002509	SCAF4	62	78.541	ENSFDAG00000017780	SCAF4	100	72.938	Fukomys_damarensis
ENSAPLG00000002509	SCAF4	70	54.522	ENSFHEG00000017866	scaf4a	54	56.285	Fundulus_heteroclitus
ENSAPLG00000002509	SCAF4	100	94.123	ENSGALG00000033965	SCAF4	99	94.858	Gallus_gallus
ENSAPLG00000002509	SCAF4	68	53.181	ENSGACG00000020580	scaf4a	58	59.535	Gasterosteus_aculeatus
ENSAPLG00000002509	SCAF4	93	78.019	ENSGGOG00000015557	SCAF4	99	83.433	Gorilla_gorilla
ENSAPLG00000002509	SCAF4	59	81.381	ENSHGLG00000010582	SCAF4	99	74.417	Heterocephalus_glaber_female
ENSAPLG00000002509	SCAF4	58	81.832	ENSHGLG00100009441	SCAF4	100	74.607	Heterocephalus_glaber_male
ENSAPLG00000002509	SCAF4	52	46.970	ENSIPUG00000011285	scaf4	66	62.372	Ictalurus_punctatus
ENSAPLG00000002509	SCAF4	58	73.261	ENSSTOG00000004450	SCAF4	100	70.325	Ictidomys_tridecemlineatus
ENSAPLG00000002509	SCAF4	99	66.609	ENSJJAG00000019447	Scaf4	99	73.726	Jaculus_jaculus
ENSAPLG00000002509	SCAF4	63	57.303	ENSKMAG00000005742	scaf4b	56	73.563	Kryptolebias_marmoratus
ENSAPLG00000002509	SCAF4	97	62.044	ENSLACG00000013913	SCAF4	100	64.168	Latimeria_chalumnae
ENSAPLG00000002509	SCAF4	96	59.619	ENSLOCG00000009162	scaf4a	99	58.415	Lepisosteus_oculatus
ENSAPLG00000002509	SCAF4	59	90.438	ENSLAFG00000010710	SCAF4	99	77.347	Loxodonta_africana
ENSAPLG00000002509	SCAF4	58	85.103	ENSMFAG00000037668	SCAF4	99	75.044	Macaca_fascicularis
ENSAPLG00000002509	SCAF4	59	83.410	ENSMMUG00000001712	SCAF4	100	74.849	Macaca_mulatta
ENSAPLG00000002509	SCAF4	58	85.103	ENSMNEG00000032966	SCAF4	99	74.978	Macaca_nemestrina
ENSAPLG00000002509	SCAF4	59	83.746	ENSMLEG00000039674	SCAF4	100	75.304	Mandrillus_leucophaeus
ENSAPLG00000002509	SCAF4	99	94.645	ENSMGAG00000014515	SCAF4	100	95.383	Meleagris_gallopavo
ENSAPLG00000002509	SCAF4	62	81.250	ENSMAUG00000013307	Scaf4	100	74.074	Mesocricetus_auratus
ENSAPLG00000002509	SCAF4	59	84.507	ENSMICG00000005256	SCAF4	99	76.262	Microcebus_murinus
ENSAPLG00000002509	SCAF4	99	67.801	ENSMOCG00000012087	Scaf4	99	70.445	Microtus_ochrogaster
ENSAPLG00000002509	SCAF4	100	76.937	ENSMODG00000021040	SCAF4	99	77.748	Monodelphis_domestica
ENSAPLG00000002509	SCAF4	59	87.004	MGP_CAROLIEiJ_G0020944	Scaf4	99	74.093	Mus_caroli
ENSAPLG00000002509	SCAF4	59	71.271	ENSMUSG00000022983	Scaf4	95	74.093	Mus_musculus
ENSAPLG00000002509	SCAF4	59	71.939	MGP_PahariEiJ_G0016649	Scaf4	95	74.807	Mus_pahari
ENSAPLG00000002509	SCAF4	59	71.627	MGP_SPRETEiJ_G0021850	Scaf4	99	74.093	Mus_spretus
ENSAPLG00000002509	SCAF4	59	82.362	ENSMPUG00000001078	SCAF4	99	75.043	Mustela_putorius_furo
ENSAPLG00000002509	SCAF4	59	74.674	ENSMLUG00000011472	SCAF4	99	67.827	Myotis_lucifugus
ENSAPLG00000002509	SCAF4	59	82.209	ENSNGAG00000005214	Scaf4	99	74.631	Nannospalax_galili
ENSAPLG00000002509	SCAF4	59	83.002	ENSNLEG00000003569	SCAF4	99	75.413	Nomascus_leucogenys
ENSAPLG00000002509	SCAF4	84	65.244	ENSOPRG00000007016	SCAF4	79	77.197	Ochotona_princeps
ENSAPLG00000002509	SCAF4	59	82.165	ENSOCUG00000008336	SCAF4	99	73.293	Oryctolagus_cuniculus
ENSAPLG00000002509	SCAF4	71	55.793	ENSORLG00020011857	scaf4a	56	56.643	Oryzias_latipes_hni
ENSAPLG00000002509	SCAF4	50	58.798	ENSORLG00020013853	scaf4b	86	63.208	Oryzias_latipes_hni
ENSAPLG00000002509	SCAF4	70	54.362	ENSORLG00015017880	scaf4a	57	58.766	Oryzias_latipes_hsok
ENSAPLG00000002509	SCAF4	71	54.937	ENSOMEG00000014482	scaf4a	56	59.471	Oryzias_melastigma
ENSAPLG00000002509	SCAF4	58	86.184	ENSOGAG00000014653	SCAF4	94	72.500	Otolemur_garnettii
ENSAPLG00000002509	SCAF4	58	82.000	ENSOARG00000013894	SCAF4	99	74.935	Ovis_aries
ENSAPLG00000002509	SCAF4	59	83.308	ENSPPAG00000028535	SCAF4	99	75.413	Pan_paniscus
ENSAPLG00000002509	SCAF4	59	83.488	ENSPPRG00000000635	SCAF4	100	76.115	Panthera_pardus
ENSAPLG00000002509	SCAF4	59	84.385	ENSPTIG00000021578	SCAF4	99	74.311	Panthera_tigris_altaica
ENSAPLG00000002509	SCAF4	59	83.308	ENSPTRG00000013848	SCAF4	99	75.413	Pan_troglodytes
ENSAPLG00000002509	SCAF4	59	83.155	ENSPANG00000017332	SCAF4	99	75.044	Papio_anubis
ENSAPLG00000002509	SCAF4	67	62.831	ENSPKIG00000022408	scaf4a	95	63.854	Paramormyrops_kingsleyae
ENSAPLG00000002509	SCAF4	99	88.366	ENSPSIG00000014242	SCAF4	97	87.442	Pelodiscus_sinensis
ENSAPLG00000002509	SCAF4	63	85.547	ENSPCIG00000028183	SCAF4	91	77.596	Phascolarctos_cinereus
ENSAPLG00000002509	SCAF4	68	57.923	ENSPLAG00000001972	scaf4a	81	56.901	Poecilia_latipinna
ENSAPLG00000002509	SCAF4	59	83.155	ENSPPYG00000011355	SCAF4	100	75.460	Pongo_abelii
ENSAPLG00000002509	SCAF4	89	88.448	ENSPCAG00000009998	SCAF4	99	70.246	Procavia_capensis
ENSAPLG00000002509	SCAF4	99	73.050	ENSPCOG00000018710	SCAF4	99	75.862	Propithecus_coquereli
ENSAPLG00000002509	SCAF4	100	74.145	ENSPVAG00000005220	SCAF4	99	75.546	Pteropus_vampyrus
ENSAPLG00000002509	SCAF4	79	56.900	ENSPNAG00000016892	scaf4a	61	63.418	Pygocentrus_nattereri
ENSAPLG00000002509	SCAF4	63	90.295	ENSRNOG00000002104	Scaf4	99	74.611	Rattus_norvegicus
ENSAPLG00000002509	SCAF4	58	82.884	ENSRBIG00000040007	SCAF4	99	73.974	Rhinopithecus_bieti
ENSAPLG00000002509	SCAF4	59	83.180	ENSRROG00000029488	SCAF4	99	75.718	Rhinopithecus_roxellana
ENSAPLG00000002509	SCAF4	99	77.223	ENSSHAG00000001581	SCAF4	99	78.040	Sarcophilus_harrisii
ENSAPLG00000002509	SCAF4	87	50.402	ENSSFOG00015006338	scaf4a	98	51.055	Scleropages_formosus
ENSAPLG00000002509	SCAF4	74	52.108	ENSSMAG00000003738	scaf4b	61	71.023	Scophthalmus_maximus
ENSAPLG00000002509	SCAF4	52	57.265	ENSSDUG00000012380	scaf4b	63	65.152	Seriola_dumerili
ENSAPLG00000002509	SCAF4	85	50.947	ENSSDUG00000012918	scaf4a	83	58.509	Seriola_dumerili
ENSAPLG00000002509	SCAF4	85	51.049	ENSSLDG00000021671	scaf4a	83	58.533	Seriola_lalandi_dorsalis
ENSAPLG00000002509	SCAF4	52	57.265	ENSSLDG00000023152	-	58	65.152	Seriola_lalandi_dorsalis
ENSAPLG00000002509	SCAF4	59	82.298	ENSSARG00000009994	SCAF4	99	73.547	Sorex_araneus
ENSAPLG00000002509	SCAF4	59	81.997	ENSSSCG00000021023	SCAF4	99	72.586	Sus_scrofa
ENSAPLG00000002509	SCAF4	78	95.437	ENSTGUG00000013464	SCAF4	95	88.667	Taeniopygia_guttata
ENSAPLG00000002509	SCAF4	59	83.826	ENSTTRG00000010963	SCAF4	100	75.859	Tursiops_truncatus
ENSAPLG00000002509	SCAF4	59	83.385	ENSUAMG00000008860	SCAF4	99	75.308	Ursus_americanus
ENSAPLG00000002509	SCAF4	58	84.127	ENSUMAG00000016962	SCAF4	100	78.080	Ursus_maritimus
ENSAPLG00000002509	SCAF4	58	83.699	ENSVVUG00000002953	SCAF4	100	76.346	Vulpes_vulpes
ENSAPLG00000002509	SCAF4	99	57.005	ENSXETG00000007351	scaf4	99	56.582	Xenopus_tropicalis