EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000002606 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 14338 bases
Position: chrKB744461.1:212576-226913
Accession: 101789501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000002060	RRM_1	PF00076.22	3.8e-25	1	2
ENSAPLP00000002060	RRM_1	PF00076.22	3.8e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000002642	TRNAU1AP-201	1934	XM_005028529	ENSAPLP00000002060	274 (aa)	-	U3I489

Gene Model

Click here to download ENSAPLG00000002606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000002606	TRNAU1AP	56	30.189	ENSAPLG00000011774	HNRNPDL	52	30.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSG00000180098	TRNAU1AP	94	93.704	Homo_sapiens
ENSAPLG00000002606	TRNAU1AP	99	60.554	ENSAPOG00000007148	TRNAU1AP	93	58.929	Acanthochromis_polyacanthus
ENSAPLG00000002606	TRNAU1AP	99	92.593	ENSAMEG00000011367	TRNAU1AP	94	92.593	Ailuropoda_melanoleuca
ENSAPLG00000002606	TRNAU1AP	95	67.857	ENSACIG00000004161	trnau1apa	92	67.857	Amphilophus_citrinellus
ENSAPLG00000002606	TRNAU1AP	99	60.071	ENSAOCG00000008056	trnau1apa	92	60.490	Amphiprion_ocellaris
ENSAPLG00000002606	TRNAU1AP	99	60.071	ENSAPEG00000008868	trnau1apa	92	60.490	Amphiprion_percula
ENSAPLG00000002606	TRNAU1AP	99	59.044	ENSATEG00000012140	trnau1apa	92	56.997	Anabas_testudineus
ENSAPLG00000002606	TRNAU1AP	66	48.352	ENSACAG00000004205	-	69	48.352	Anolis_carolinensis
ENSAPLG00000002606	TRNAU1AP	99	78.229	ENSACAG00000003995	-	94	78.229	Anolis_carolinensis
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSANAG00000018976	TRNAU1AP	94	93.704	Aotus_nancymaae
ENSAPLG00000002606	TRNAU1AP	98	60.563	ENSACLG00000018515	trnau1apa	92	61.268	Astatotilapia_calliptera
ENSAPLG00000002606	TRNAU1AP	96	66.667	ENSAMXG00000029240	-	93	66.667	Astyanax_mexicanus
ENSAPLG00000002606	TRNAU1AP	99	57.914	ENSAMXG00000013750	trnau1apa	89	56.727	Astyanax_mexicanus
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSBTAG00000010393	TRNAU1AP	94	93.333	Bos_taurus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCJAG00000009717	TRNAU1AP	94	93.704	Callithrix_jacchus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCAFG00000011735	TRNAU1AP	94	93.704	Canis_familiaris
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCAFG00020023584	TRNAU1AP	94	93.704	Canis_lupus_dingo
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSCHIG00000023215	TRNAU1AP	94	93.333	Capra_hircus
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSTSYG00000003506	TRNAU1AP	94	93.333	Carlito_syrichta
ENSAPLG00000002606	TRNAU1AP	99	94.074	ENSCPOG00000001925	TRNAU1AP	94	94.074	Cavia_porcellus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCCAG00000037506	TRNAU1AP	94	93.704	Cebus_capucinus
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSCATG00000044617	TRNAU1AP	94	93.333	Cercocebus_atys
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCLAG00000008223	TRNAU1AP	94	93.704	Chinchilla_lanigera
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSCSAG00000001014	TRNAU1AP	94	93.333	Chlorocebus_sabaeus
ENSAPLG00000002606	TRNAU1AP	96	95.802	ENSCPBG00000000121	TRNAU1AP	96	95.802	Chrysemys_picta_bellii
ENSAPLG00000002606	TRNAU1AP	62	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSAPLG00000002606	TRNAU1AP	99	81.111	ENSCANG00000041949	TRNAU1AP	93	93.333	Colobus_angolensis_palliatus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCGRG00001004713	Trnau1ap	94	93.704	Cricetulus_griseus_chok1gshd
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSCGRG00000014532	Trnau1ap	94	93.704	Cricetulus_griseus_crigri
ENSAPLG00000002606	TRNAU1AP	98	57.586	ENSCSEG00000006663	trnau1apa	92	57.388	Cynoglossus_semilaevis
ENSAPLG00000002606	TRNAU1AP	99	57.343	ENSCVAG00000018069	trnau1apa	93	59.041	Cyprinodon_variegatus
ENSAPLG00000002606	TRNAU1AP	99	50.178	ENSDARG00000101323	trnau1apa	88	50.179	Danio_rerio
ENSAPLG00000002606	TRNAU1AP	67	77.717	ENSDNOG00000047959	-	93	77.778	Dasypus_novemcinctus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSDNOG00000033009	TRNAU1AP	94	93.704	Dasypus_novemcinctus
ENSAPLG00000002606	TRNAU1AP	97	89.139	ENSDORG00000006349	Trnau1ap	98	94.690	Dipodomys_ordii
ENSAPLG00000002606	TRNAU1AP	100	36.923	FBgn0031607	CG15440	52	49.432	Drosophila_melanogaster
ENSAPLG00000002606	TRNAU1AP	85	91.416	ENSETEG00000012594	TRNAU1AP	95	91.416	Echinops_telfairi
ENSAPLG00000002606	TRNAU1AP	56	55.682	ENSEBUG00000006349	-	60	55.682	Eptatretus_burgeri
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSEASG00005010062	TRNAU1AP	94	93.704	Equus_asinus_asinus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSECAG00000012980	TRNAU1AP	94	93.704	Equus_caballus
ENSAPLG00000002606	TRNAU1AP	99	62.676	ENSELUG00000017686	trnau1apa	93	62.271	Esox_lucius
ENSAPLG00000002606	TRNAU1AP	98	69.565	ENSELUG00000022790	-	92	70.238	Esox_lucius
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSFCAG00000013401	TRNAU1AP	94	93.704	Felis_catus
ENSAPLG00000002606	TRNAU1AP	96	98.855	ENSFALG00000001371	TRNAU1AP	96	98.855	Ficedula_albicollis
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSFDAG00000018599	TRNAU1AP	94	93.333	Fukomys_damarensis
ENSAPLG00000002606	TRNAU1AP	82	59.184	ENSFHEG00000018232	trnau1apa	86	56.863	Fundulus_heteroclitus
ENSAPLG00000002606	TRNAU1AP	99	53.710	ENSGMOG00000016508	trnau1apa	92	54.643	Gadus_morhua
ENSAPLG00000002606	TRNAU1AP	66	42.500	ENSGALG00000012721	C2H6orf52	91	43.725	Gallus_gallus
ENSAPLG00000002606	TRNAU1AP	99	95.926	ENSGALG00000001310	-	94	95.926	Gallus_gallus
ENSAPLG00000002606	TRNAU1AP	81	57.563	ENSGAFG00000004928	trnau1apa	94	54.582	Gambusia_affinis
ENSAPLG00000002606	TRNAU1AP	99	60.638	ENSGACG00000001443	trnau1apa	92	60.284	Gasterosteus_aculeatus
ENSAPLG00000002606	TRNAU1AP	96	96.183	ENSGAGG00000004940	TRNAU1AP	96	96.183	Gopherus_agassizii
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSGGOG00000003511	TRNAU1AP	94	93.704	Gorilla_gorilla
ENSAPLG00000002606	TRNAU1AP	98	59.516	ENSHBUG00000002510	trnau1apa	91	70.455	Haplochromis_burtoni
ENSAPLG00000002606	TRNAU1AP	99	92.963	ENSHGLG00000010380	TRNAU1AP	94	92.963	Heterocephalus_glaber_female
ENSAPLG00000002606	TRNAU1AP	95	93.822	ENSHGLG00100012699	TRNAU1AP	91	94.186	Heterocephalus_glaber_male
ENSAPLG00000002606	TRNAU1AP	98	57.491	ENSHCOG00000014770	trnau1apa	92	55.709	Hippocampus_comes
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSSTOG00000000079	TRNAU1AP	94	93.704	Ictidomys_tridecemlineatus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSJJAG00000010128	Trnau1ap	94	93.704	Jaculus_jaculus
ENSAPLG00000002606	TRNAU1AP	99	60.140	ENSKMAG00000001230	trnau1apa	92	58.042	Kryptolebias_marmoratus
ENSAPLG00000002606	TRNAU1AP	99	60.825	ENSLBEG00000011683	trnau1apa	92	59.322	Labrus_bergylta
ENSAPLG00000002606	TRNAU1AP	99	71.481	ENSLACG00000005541	TRNAU1AP	94	71.481	Latimeria_chalumnae
ENSAPLG00000002606	TRNAU1AP	99	71.795	ENSLOCG00000004041	trnau1apa	94	71.062	Lepisosteus_oculatus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSLAFG00000007628	TRNAU1AP	94	93.704	Loxodonta_africana
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSMFAG00000043751	TRNAU1AP	94	93.333	Macaca_fascicularis
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSMMUG00000006561	TRNAU1AP	94	93.333	Macaca_mulatta
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSMNEG00000044201	TRNAU1AP	94	93.333	Macaca_nemestrina
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSMLEG00000015649	TRNAU1AP	94	93.333	Mandrillus_leucophaeus
ENSAPLG00000002606	TRNAU1AP	99	59.928	ENSMAMG00000001247	trnau1apa	91	60.148	Mastacembelus_armatus
ENSAPLG00000002606	TRNAU1AP	98	60.563	ENSMZEG00005017722	trnau1apa	92	61.268	Maylandia_zebra
ENSAPLG00000002606	TRNAU1AP	97	96.241	ENSMGAG00000002105	TRNAU1AP	96	96.241	Meleagris_gallopavo
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSMICG00000008386	TRNAU1AP	94	93.704	Microcebus_murinus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSMOCG00000011189	Trnau1ap	94	93.704	Microtus_ochrogaster
ENSAPLG00000002606	TRNAU1AP	98	57.621	ENSMMOG00000012107	trnau1apa	91	57.621	Mola_mola
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSMODG00000010927	TRNAU1AP	94	93.704	Monodelphis_domestica
ENSAPLG00000002606	TRNAU1AP	99	58.537	ENSMALG00000016778	trnau1apa	92	57.639	Monopterus_albus
ENSAPLG00000002606	TRNAU1AP	99	92.963	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	93.103	Mus_caroli
ENSAPLG00000002606	TRNAU1AP	99	92.963	ENSMUSG00000028898	Trnau1ap	98	93.103	Mus_musculus
ENSAPLG00000002606	TRNAU1AP	99	93.333	MGP_PahariEiJ_G0028896	Trnau1ap	98	93.103	Mus_pahari
ENSAPLG00000002606	TRNAU1AP	99	92.963	MGP_SPRETEiJ_G0027544	Trnau1ap	98	93.103	Mus_spretus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSMPUG00000015511	TRNAU1AP	94	93.704	Mustela_putorius_furo
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSMLUG00000012586	TRNAU1AP	94	93.704	Myotis_lucifugus
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSNGAG00000015881	Trnau1ap	94	93.333	Nannospalax_galili
ENSAPLG00000002606	TRNAU1AP	98	58.394	ENSNBRG00000001758	trnau1apa	92	58.394	Neolamprologus_brichardi
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSNLEG00000009822	TRNAU1AP	94	93.704	Nomascus_leucogenys
ENSAPLG00000002606	TRNAU1AP	97	93.609	ENSMEUG00000006117	TRNAU1AP	96	93.609	Notamacropus_eugenii
ENSAPLG00000002606	TRNAU1AP	68	88.776	ENSOPRG00000007084	-	63	88.776	Ochotona_princeps
ENSAPLG00000002606	TRNAU1AP	99	94.074	ENSODEG00000002970	TRNAU1AP	94	94.074	Octodon_degus
ENSAPLG00000002606	TRNAU1AP	84	58.800	ENSONIG00000004715	trnau1apa	96	60.163	Oreochromis_niloticus
ENSAPLG00000002606	TRNAU1AP	99	73.897	ENSOANG00000005325	-	94	73.897	Ornithorhynchus_anatinus
ENSAPLG00000002606	TRNAU1AP	99	91.481	ENSOCUG00000011704	-	94	91.481	Oryctolagus_cuniculus
ENSAPLG00000002606	TRNAU1AP	99	72.325	ENSOCUG00000002353	-	94	72.325	Oryctolagus_cuniculus
ENSAPLG00000002606	TRNAU1AP	91	73.387	ENSOCUG00000006834	-	97	71.371	Oryctolagus_cuniculus
ENSAPLG00000002606	TRNAU1AP	98	59.431	ENSORLG00000010428	trnau1apa	92	57.295	Oryzias_latipes
ENSAPLG00000002606	TRNAU1AP	98	59.431	ENSORLG00020000926	trnau1ap	92	57.295	Oryzias_latipes_hni
ENSAPLG00000002606	TRNAU1AP	98	59.431	ENSORLG00015009858	trnau1ap	92	57.295	Oryzias_latipes_hsok
ENSAPLG00000002606	TRNAU1AP	98	58.719	ENSOMEG00000007873	trnau1apa	92	56.940	Oryzias_melastigma
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSOGAG00000002274	TRNAU1AP	94	93.704	Otolemur_garnettii
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSOARG00000002843	TRNAU1AP	94	93.333	Ovis_aries
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSPPAG00000033927	TRNAU1AP	94	93.704	Pan_paniscus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSPPRG00000004416	TRNAU1AP	94	93.704	Panthera_pardus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSPTIG00000016677	TRNAU1AP	94	93.704	Panthera_tigris_altaica
ENSAPLG00000002606	TRNAU1AP	93	77.132	ENSPTRG00000000434	-	93	76.062	Pan_troglodytes
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSPANG00000016019	TRNAU1AP	94	93.333	Papio_anubis
ENSAPLG00000002606	TRNAU1AP	97	73.626	ENSPKIG00000022205	-	92	75.862	Paramormyrops_kingsleyae
ENSAPLG00000002606	TRNAU1AP	98	58.214	ENSPKIG00000015511	trnau1apa	91	57.801	Paramormyrops_kingsleyae
ENSAPLG00000002606	TRNAU1AP	96	96.565	ENSPSIG00000006864	TRNAU1AP	96	96.565	Pelodiscus_sinensis
ENSAPLG00000002606	TRNAU1AP	98	60.294	ENSPMGG00000023893	trnau1apa	91	59.410	Periophthalmus_magnuspinnatus
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSPEMG00000007877	Trnau1ap	94	93.333	Peromyscus_maniculatus_bairdii
ENSAPLG00000002606	TRNAU1AP	82	60.714	ENSPMAG00000005934	trnau1apa	99	58.929	Petromyzon_marinus
ENSAPLG00000002606	TRNAU1AP	62	60.920	ENSPMAG00000000592	trnau1apa	96	60.920	Petromyzon_marinus
ENSAPLG00000002606	TRNAU1AP	99	56.250	ENSPFOG00000008100	trnau1apa	92	54.861	Poecilia_formosa
ENSAPLG00000002606	TRNAU1AP	96	56.429	ENSPLAG00000010236	trnau1apa	93	55.000	Poecilia_latipinna
ENSAPLG00000002606	TRNAU1AP	97	58.427	ENSPMEG00000016387	trnau1apa	89	58.801	Poecilia_mexicana
ENSAPLG00000002606	TRNAU1AP	97	54.511	ENSPREG00000019821	trnau1apa	90	59.375	Poecilia_reticulata
ENSAPLG00000002606	TRNAU1AP	89	81.707	ENSPPYG00000001639	-	95	81.707	Pongo_abelii
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSPCOG00000027712	-	94	93.704	Propithecus_coquereli
ENSAPLG00000002606	TRNAU1AP	98	75.836	ENSPCOG00000023470	-	95	75.836	Propithecus_coquereli
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSPVAG00000017214	TRNAU1AP	94	93.704	Pteropus_vampyrus
ENSAPLG00000002606	TRNAU1AP	98	59.516	ENSPNYG00000010130	trnau1apa	97	58.893	Pundamilia_nyererei
ENSAPLG00000002606	TRNAU1AP	99	53.214	ENSPNAG00000024905	trnau1apa	90	52.364	Pygocentrus_nattereri
ENSAPLG00000002606	TRNAU1AP	97	85.338	ENSRNOG00000055344	Trnau1ap	91	85.338	Rattus_norvegicus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSRBIG00000029083	TRNAU1AP	94	93.704	Rhinopithecus_bieti
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSRROG00000029128	TRNAU1AP	94	93.704	Rhinopithecus_roxellana
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSSBOG00000021299	TRNAU1AP	94	93.704	Saimiri_boliviensis_boliviensis
ENSAPLG00000002606	TRNAU1AP	99	92.593	ENSSHAG00000008108	TRNAU1AP	94	92.593	Sarcophilus_harrisii
ENSAPLG00000002606	TRNAU1AP	98	56.055	ENSSMAG00000020851	trnau1apa	92	57.692	Scophthalmus_maximus
ENSAPLG00000002606	TRNAU1AP	99	58.562	ENSSDUG00000011734	trnau1apa	92	56.401	Seriola_dumerili
ENSAPLG00000002606	TRNAU1AP	99	50.370	ENSSLDG00000012101	trnau1apa	90	50.000	Seriola_lalandi_dorsalis
ENSAPLG00000002606	TRNAU1AP	97	94.737	ENSSARG00000007536	TRNAU1AP	96	94.737	Sorex_araneus
ENSAPLG00000002606	TRNAU1AP	99	87.037	ENSSPUG00000010400	-	94	87.037	Sphenodon_punctatus
ENSAPLG00000002606	TRNAU1AP	60	84.242	ENSSPUG00000010415	-	94	84.242	Sphenodon_punctatus
ENSAPLG00000002606	TRNAU1AP	99	60.279	ENSSPAG00000005029	trnau1apa	92	60.279	Stegastes_partitus
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSSSCG00000030284	TRNAU1AP	94	93.704	Sus_scrofa
ENSAPLG00000002606	TRNAU1AP	66	52.174	ENSTGUG00000005908	-	94	52.174	Taeniopygia_guttata
ENSAPLG00000002606	TRNAU1AP	97	98.496	ENSTGUG00000000735	-	96	98.496	Taeniopygia_guttata
ENSAPLG00000002606	TRNAU1AP	98	58.865	ENSTRUG00000003352	trnau1apa	92	57.544	Takifugu_rubripes
ENSAPLG00000002606	TRNAU1AP	98	57.042	ENSTNIG00000006129	trnau1apa	92	56.491	Tetraodon_nigroviridis
ENSAPLG00000002606	TRNAU1AP	85	84.549	ENSTBEG00000008049	-	95	84.549	Tupaia_belangeri
ENSAPLG00000002606	TRNAU1AP	99	93.704	ENSTTRG00000001854	TRNAU1AP	94	93.704	Tursiops_truncatus
ENSAPLG00000002606	TRNAU1AP	96	94.275	ENSUAMG00000008789	TRNAU1AP	96	94.275	Ursus_americanus
ENSAPLG00000002606	TRNAU1AP	99	93.333	ENSUMAG00000011068	TRNAU1AP	94	93.333	Ursus_maritimus
ENSAPLG00000002606	TRNAU1AP	99	82.734	ENSVPAG00000006778	TRNAU1AP	96	82.734	Vicugna_pacos
ENSAPLG00000002606	TRNAU1AP	97	94.382	ENSVVUG00000012518	TRNAU1AP	88	93.680	Vulpes_vulpes
ENSAPLG00000002606	TRNAU1AP	99	55.903	ENSXMAG00000017361	trnau1apa	92	55.208	Xiphophorus_maculatus