EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000002756 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: -
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 4618 bases
Position: chrKB743139.1:359736-364353
Accession: 101794744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000002197	HVSL	PF09749.9	3.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000002783	USB1-201	681	XM_005020005	ENSAPLP00000002197	226 (aa)	-	U3I4M6

Gene Model

Click here to download ENSAPLG00000002756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002756	USB1	100	69.469	ENSG00000103005	USB1	95	71.569	Homo_sapiens
ENSAPLG00000002756	USB1	99	54.222	ENSAPOG00000011942	usb1	79	54.222	Acanthochromis_polyacanthus
ENSAPLG00000002756	USB1	100	69.912	ENSAMEG00000017205	USB1	83	69.469	Ailuropoda_melanoleuca
ENSAPLG00000002756	USB1	99	58.222	ENSACIG00000012234	usb1	82	58.222	Amphilophus_citrinellus
ENSAPLG00000002756	USB1	99	55.556	ENSAOCG00000014831	usb1	79	55.556	Amphiprion_ocellaris
ENSAPLG00000002756	USB1	99	56.000	ENSAPEG00000000296	usb1	79	56.000	Amphiprion_percula
ENSAPLG00000002756	USB1	100	55.310	ENSATEG00000009348	usb1	79	55.310	Anabas_testudineus
ENSAPLG00000002756	USB1	100	69.912	ENSACAG00000015481	USB1	99	69.912	Anolis_carolinensis
ENSAPLG00000002756	USB1	100	70.044	ENSANAG00000035640	USB1	85	69.604	Aotus_nancymaae
ENSAPLG00000002756	USB1	99	56.000	ENSACLG00000020586	usb1	79	55.556	Astatotilapia_calliptera
ENSAPLG00000002756	USB1	99	56.000	ENSAMXG00000040146	usb1	74	55.556	Astyanax_mexicanus
ENSAPLG00000002756	USB1	100	69.027	ENSBTAG00000015758	USB1	85	69.027	Bos_taurus
ENSAPLG00000002756	USB1	100	70.796	ENSCJAG00000011733	USB1	85	70.925	Callithrix_jacchus
ENSAPLG00000002756	USB1	99	71.556	ENSCAFG00000008556	USB1	60	71.111	Canis_familiaris
ENSAPLG00000002756	USB1	99	71.556	ENSCAFG00020009263	USB1	84	71.111	Canis_lupus_dingo
ENSAPLG00000002756	USB1	100	68.584	ENSCHIG00000024290	USB1	85	68.584	Capra_hircus
ENSAPLG00000002756	USB1	100	68.722	ENSTSYG00000006997	USB1	85	68.282	Carlito_syrichta
ENSAPLG00000002756	USB1	100	56.195	ENSCAPG00000009057	USB1	96	55.752	Cavia_aperea
ENSAPLG00000002756	USB1	100	68.142	ENSCPOG00000014325	USB1	83	67.699	Cavia_porcellus
ENSAPLG00000002756	USB1	100	69.912	ENSCCAG00000022132	USB1	85	70.044	Cebus_capucinus
ENSAPLG00000002756	USB1	100	70.796	ENSCATG00000032174	USB1	85	70.925	Cercocebus_atys
ENSAPLG00000002756	USB1	78	68.182	ENSCLAG00000007363	USB1	93	69.325	Chinchilla_lanigera
ENSAPLG00000002756	USB1	100	70.796	ENSCSAG00000004783	USB1	85	70.925	Chlorocebus_sabaeus
ENSAPLG00000002756	USB1	100	80.531	ENSCPBG00000026943	USB1	81	80.531	Chrysemys_picta_bellii
ENSAPLG00000002756	USB1	100	70.925	ENSCANG00000037135	USB1	85	70.485	Colobus_angolensis_palliatus
ENSAPLG00000002756	USB1	100	70.044	ENSCGRG00001011243	USB1	84	69.604	Cricetulus_griseus_chok1gshd
ENSAPLG00000002756	USB1	100	70.044	ENSCGRG00000013252	USB1	84	69.604	Cricetulus_griseus_crigri
ENSAPLG00000002756	USB1	99	54.222	ENSCSEG00000013881	usb1	80	53.778	Cynoglossus_semilaevis
ENSAPLG00000002756	USB1	100	52.632	ENSCVAG00000009252	usb1	97	52.632	Cyprinodon_variegatus
ENSAPLG00000002756	USB1	100	54.425	ENSDARG00000003841	usb1	81	54.425	Danio_rerio
ENSAPLG00000002756	USB1	100	70.044	ENSDORG00000001888	Usb1	85	69.604	Dipodomys_ordii
ENSAPLG00000002756	USB1	99	37.768	FBgn0037713	CG16790	78	38.049	Drosophila_melanogaster
ENSAPLG00000002756	USB1	100	58.590	ENSETEG00000019682	USB1	84	58.150	Echinops_telfairi
ENSAPLG00000002756	USB1	99	50.893	ENSEBUG00000005889	usb1	78	50.893	Eptatretus_burgeri
ENSAPLG00000002756	USB1	100	70.354	ENSEASG00005005484	USB1	85	70.354	Equus_asinus_asinus
ENSAPLG00000002756	USB1	99	71.556	ENSECAG00000019493	USB1	77	71.556	Equus_caballus
ENSAPLG00000002756	USB1	78	63.636	ENSEEUG00000000154	USB1	62	63.190	Erinaceus_europaeus
ENSAPLG00000002756	USB1	100	56.195	ENSELUG00000010974	usb1	82	55.752	Esox_lucius
ENSAPLG00000002756	USB1	100	70.354	ENSFCAG00000002693	USB1	84	70.485	Felis_catus
ENSAPLG00000002756	USB1	100	77.434	ENSFALG00000006876	USB1	77	82.439	Ficedula_albicollis
ENSAPLG00000002756	USB1	100	68.142	ENSFDAG00000010052	USB1	84	68.142	Fukomys_damarensis
ENSAPLG00000002756	USB1	85	54.688	ENSFHEG00000012334	usb1	76	55.208	Fundulus_heteroclitus
ENSAPLG00000002756	USB1	99	55.111	ENSGMOG00000004228	usb1	99	55.111	Gadus_morhua
ENSAPLG00000002756	USB1	99	84.444	ENSGALG00000035604	USB1	88	84.513	Gallus_gallus
ENSAPLG00000002756	USB1	100	55.310	ENSGAFG00000021890	usb1	81	55.310	Gambusia_affinis
ENSAPLG00000002756	USB1	99	53.778	ENSGACG00000003257	usb1	80	53.778	Gasterosteus_aculeatus
ENSAPLG00000002756	USB1	100	80.088	ENSGAGG00000022572	USB1	82	80.088	Gopherus_agassizii
ENSAPLG00000002756	USB1	100	69.469	ENSGGOG00000017147	USB1	85	69.604	Gorilla_gorilla
ENSAPLG00000002756	USB1	99	56.000	ENSHBUG00000009823	usb1	79	56.000	Haplochromis_burtoni
ENSAPLG00000002756	USB1	100	69.027	ENSHGLG00000016078	USB1	82	69.333	Heterocephalus_glaber_female
ENSAPLG00000002756	USB1	100	69.027	ENSHGLG00100005562	USB1	82	69.333	Heterocephalus_glaber_male
ENSAPLG00000002756	USB1	96	54.128	ENSHCOG00000015633	usb1	86	54.222	Hippocampus_comes
ENSAPLG00000002756	USB1	100	58.850	ENSIPUG00000008601	usb1	78	58.850	Ictalurus_punctatus
ENSAPLG00000002756	USB1	100	72.124	ENSSTOG00000007548	USB1	82	72.124	Ictidomys_tridecemlineatus
ENSAPLG00000002756	USB1	100	71.239	ENSJJAG00000021859	Usb1	84	70.354	Jaculus_jaculus
ENSAPLG00000002756	USB1	99	54.667	ENSKMAG00000007200	usb1	78	54.667	Kryptolebias_marmoratus
ENSAPLG00000002756	USB1	91	53.623	ENSLBEG00000008452	usb1	64	54.167	Labrus_bergylta
ENSAPLG00000002756	USB1	92	69.524	ENSLACG00000000105	USB1	72	68.900	Latimeria_chalumnae
ENSAPLG00000002756	USB1	100	61.062	ENSLOCG00000000465	usb1	79	60.619	Lepisosteus_oculatus
ENSAPLG00000002756	USB1	100	58.150	ENSLAFG00000002267	USB1	83	57.709	Loxodonta_africana
ENSAPLG00000002756	USB1	100	70.796	ENSMFAG00000003926	USB1	85	70.925	Macaca_fascicularis
ENSAPLG00000002756	USB1	100	70.796	ENSMMUG00000022669	USB1	85	70.925	Macaca_mulatta
ENSAPLG00000002756	USB1	100	70.354	ENSMNEG00000042487	USB1	85	70.485	Macaca_nemestrina
ENSAPLG00000002756	USB1	100	70.796	ENSMLEG00000028756	USB1	85	70.925	Mandrillus_leucophaeus
ENSAPLG00000002756	USB1	99	56.000	ENSMAMG00000015092	usb1	80	56.000	Mastacembelus_armatus
ENSAPLG00000002756	USB1	99	56.000	ENSMZEG00005010008	usb1	79	55.556	Maylandia_zebra
ENSAPLG00000002756	USB1	100	69.163	ENSMAUG00000007832	Usb1	84	68.722	Mesocricetus_auratus
ENSAPLG00000002756	USB1	100	70.925	ENSMICG00000004900	USB1	85	70.485	Microcebus_murinus
ENSAPLG00000002756	USB1	100	70.044	ENSMOCG00000022647	Usb1	84	69.604	Microtus_ochrogaster
ENSAPLG00000002756	USB1	100	55.752	ENSMMOG00000000490	usb1	87	55.752	Mola_mola
ENSAPLG00000002756	USB1	97	67.727	ENSMODG00000014067	USB1	84	67.699	Monodelphis_domestica
ENSAPLG00000002756	USB1	99	56.000	ENSMALG00000005930	usb1	79	56.000	Monopterus_albus
ENSAPLG00000002756	USB1	100	67.257	MGP_CAROLIEiJ_G0031421	Usb1	91	64.078	Mus_caroli
ENSAPLG00000002756	USB1	100	67.699	ENSMUSG00000031792	Usb1	91	65.049	Mus_musculus
ENSAPLG00000002756	USB1	100	67.699	MGP_PahariEiJ_G0023019	Usb1	91	65.421	Mus_pahari
ENSAPLG00000002756	USB1	100	67.257	MGP_SPRETEiJ_G0032540	Usb1	84	67.257	Mus_spretus
ENSAPLG00000002756	USB1	100	69.027	ENSMPUG00000004684	USB1	80	68.584	Mustela_putorius_furo
ENSAPLG00000002756	USB1	100	70.925	ENSMLUG00000007400	USB1	97	70.485	Myotis_lucifugus
ENSAPLG00000002756	USB1	100	69.912	ENSNGAG00000009703	Usb1	83	69.912	Nannospalax_galili
ENSAPLG00000002756	USB1	99	52.000	ENSNBRG00000008747	usb1	95	56.863	Neolamprologus_brichardi
ENSAPLG00000002756	USB1	93	69.668	ENSNLEG00000003340	USB1	84	69.811	Nomascus_leucogenys
ENSAPLG00000002756	USB1	72	67.647	ENSOPRG00000011803	USB1	69	67.647	Ochotona_princeps
ENSAPLG00000002756	USB1	100	68.142	ENSODEG00000016214	USB1	84	68.142	Octodon_degus
ENSAPLG00000002756	USB1	99	56.889	ENSONIG00000011063	usb1	80	56.889	Oreochromis_niloticus
ENSAPLG00000002756	USB1	100	73.451	ENSOANG00000012118	USB1	94	73.451	Ornithorhynchus_anatinus
ENSAPLG00000002756	USB1	99	54.222	ENSORLG00000012479	usb1	82	54.222	Oryzias_latipes
ENSAPLG00000002756	USB1	99	54.222	ENSORLG00020018671	usb1	82	54.222	Oryzias_latipes_hni
ENSAPLG00000002756	USB1	99	54.222	ENSORLG00015009679	usb1	82	54.222	Oryzias_latipes_hsok
ENSAPLG00000002756	USB1	99	52.889	ENSOMEG00000012930	usb1	80	52.889	Oryzias_melastigma
ENSAPLG00000002756	USB1	100	64.159	ENSOGAG00000003273	USB1	83	64.317	Otolemur_garnettii
ENSAPLG00000002756	USB1	100	69.027	ENSOARG00000001107	USB1	86	69.027	Ovis_aries
ENSAPLG00000002756	USB1	100	69.469	ENSPPAG00000042137	USB1	85	69.604	Pan_paniscus
ENSAPLG00000002756	USB1	100	69.912	ENSPPRG00000024797	USB1	84	70.044	Panthera_pardus
ENSAPLG00000002756	USB1	100	69.469	ENSPTIG00000007506	USB1	84	69.604	Panthera_tigris_altaica
ENSAPLG00000002756	USB1	100	64.159	ENSPTRG00000008172	USB1	95	72.059	Pan_troglodytes
ENSAPLG00000002756	USB1	100	70.796	ENSPANG00000025138	USB1	85	70.925	Papio_anubis
ENSAPLG00000002756	USB1	99	58.667	ENSPKIG00000015109	usb1	75	58.667	Paramormyrops_kingsleyae
ENSAPLG00000002756	USB1	100	63.203	ENSPSIG00000004305	USB1	100	63.203	Pelodiscus_sinensis
ENSAPLG00000002756	USB1	99	55.556	ENSPMGG00000017725	usb1	85	55.556	Periophthalmus_magnuspinnatus
ENSAPLG00000002756	USB1	100	69.027	ENSPEMG00000016183	Usb1	82	69.163	Peromyscus_maniculatus_bairdii
ENSAPLG00000002756	USB1	100	55.752	ENSPMAG00000000462	usb1	95	55.752	Petromyzon_marinus
ENSAPLG00000002756	USB1	100	55.310	ENSPFOG00000011130	usb1	81	55.310	Poecilia_formosa
ENSAPLG00000002756	USB1	100	54.867	ENSPLAG00000009820	usb1	81	54.867	Poecilia_latipinna
ENSAPLG00000002756	USB1	100	55.310	ENSPMEG00000006402	usb1	81	55.310	Poecilia_mexicana
ENSAPLG00000002756	USB1	85	56.771	ENSPREG00000001047	usb1	77	57.812	Poecilia_reticulata
ENSAPLG00000002756	USB1	94	65.728	ENSPPYG00000007401	USB1	84	65.888	Pongo_abelii
ENSAPLG00000002756	USB1	100	69.027	ENSPCOG00000022612	USB1	85	68.584	Propithecus_coquereli
ENSAPLG00000002756	USB1	100	67.257	ENSPVAG00000004613	USB1	86	67.401	Pteropus_vampyrus
ENSAPLG00000002756	USB1	99	56.000	ENSPNYG00000022262	usb1	79	56.000	Pundamilia_nyererei
ENSAPLG00000002756	USB1	100	56.195	ENSPNAG00000011736	usb1	76	55.752	Pygocentrus_nattereri
ENSAPLG00000002756	USB1	100	67.257	ENSRNOG00000013216	Usb1	84	67.401	Rattus_norvegicus
ENSAPLG00000002756	USB1	100	65.044	ENSRBIG00000044466	USB1	95	73.039	Rhinopithecus_bieti
ENSAPLG00000002756	USB1	100	71.366	ENSRROG00000029211	USB1	85	70.925	Rhinopithecus_roxellana
ENSAPLG00000002756	USB1	100	70.796	ENSSBOG00000029362	USB1	85	70.925	Saimiri_boliviensis_boliviensis
ENSAPLG00000002756	USB1	98	65.158	ENSSHAG00000006993	USB1	89	65.044	Sarcophilus_harrisii
ENSAPLG00000002756	USB1	99	61.778	ENSSFOG00015023663	usb1	70	61.333	Scleropages_formosus
ENSAPLG00000002756	USB1	99	52.720	ENSSMAG00000015834	usb1	80	52.720	Scophthalmus_maximus
ENSAPLG00000002756	USB1	99	58.222	ENSSDUG00000002949	usb1	83	58.222	Seriola_dumerili
ENSAPLG00000002756	USB1	99	58.667	ENSSLDG00000014174	usb1	79	58.222	Seriola_lalandi_dorsalis
ENSAPLG00000002756	USB1	96	74.074	ENSSPUG00000006741	USB1	95	75.000	Sphenodon_punctatus
ENSAPLG00000002756	USB1	99	55.556	ENSSPAG00000007484	usb1	78	55.111	Stegastes_partitus
ENSAPLG00000002756	USB1	100	70.796	ENSSSCG00000002807	USB1	83	70.796	Sus_scrofa
ENSAPLG00000002756	USB1	94	83.099	ENSTGUG00000004792	USB1	80	84.878	Taeniopygia_guttata
ENSAPLG00000002756	USB1	100	53.982	ENSTRUG00000021069	usb1	83	53.982	Takifugu_rubripes
ENSAPLG00000002756	USB1	100	49.115	ENSTNIG00000000626	usb1	83	49.115	Tetraodon_nigroviridis
ENSAPLG00000002756	USB1	100	48.673	ENSTBEG00000001507	USB1	97	48.673	Tupaia_belangeri
ENSAPLG00000002756	USB1	100	70.354	ENSUAMG00000016823	USB1	83	69.912	Ursus_americanus
ENSAPLG00000002756	USB1	96	69.907	ENSUMAG00000021369	USB1	95	71.569	Ursus_maritimus
ENSAPLG00000002756	USB1	99	71.556	ENSVVUG00000023700	USB1	86	71.111	Vulpes_vulpes
ENSAPLG00000002756	USB1	97	61.187	ENSXETG00000013795	usb1	89	60.714	Xenopus_tropicalis
ENSAPLG00000002756	USB1	100	55.310	ENSXMAG00000024687	usb1	66	55.310	Xiphophorus_maculatus