EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000002826 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 74496 bases
Position: chrKB742880.1:580057-654552
Accession: 101803110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000002318	ResIII	PF04851.15	9.9e-07	1	1
ENSAPLP00000002318	BRK	PF07533.16	2.2e-33	1	2
ENSAPLP00000002318	BRK	PF07533.16	2.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000002906	CHD9-201	8616	XM_005016989	ENSAPLP00000002318	2871 (aa)	XP_005017047	U3I4Z7

Gene Model

Click here to download ENSAPLG00000002826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000002826	CHD9	91	58.255	ENSAPLG00000005873	CHD7	97	54.763
ENSAPLG00000002826	CHD9	64	66.036	ENSAPLG00000015592	CHD6	83	62.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002826	CHD9	74	86.016	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSAPLG00000002826	CHD9	86	70.495	ENSAPOG00000023034	chd9	98	69.911	Acanthochromis_polyacanthus
ENSAPLG00000002826	CHD9	74	85.969	ENSAMEG00000016232	CHD9	99	84.253	Ailuropoda_melanoleuca
ENSAPLG00000002826	CHD9	79	70.206	ENSACIG00000004097	chd9	98	60.853	Amphilophus_citrinellus
ENSAPLG00000002826	CHD9	61	77.940	ENSAOCG00000005487	chd9	98	70.285	Amphiprion_ocellaris
ENSAPLG00000002826	CHD9	81	70.883	ENSAPEG00000009859	chd9	97	70.256	Amphiprion_percula
ENSAPLG00000002826	CHD9	56	77.981	ENSATEG00000002748	chd9	99	63.046	Anabas_testudineus
ENSAPLG00000002826	CHD9	74	86.918	ENSACAG00000016150	CHD9	73	86.918	Anolis_carolinensis
ENSAPLG00000002826	CHD9	74	85.969	ENSANAG00000015630	CHD9	98	92.308	Aotus_nancymaae
ENSAPLG00000002826	CHD9	81	69.612	ENSAMXG00000005652	chd9	99	69.328	Astyanax_mexicanus
ENSAPLG00000002826	CHD9	74	86.157	ENSBTAG00000002287	CHD9	99	83.964	Bos_taurus
ENSAPLG00000002826	CHD9	74	85.687	ENSCJAG00000001573	CHD9	98	92.308	Callithrix_jacchus
ENSAPLG00000002826	CHD9	74	85.922	ENSCAFG00000009699	CHD9	99	84.287	Canis_familiaris
ENSAPLG00000002826	CHD9	74	85.922	ENSCAFG00020002879	CHD9	98	91.941	Canis_lupus_dingo
ENSAPLG00000002826	CHD9	99	82.733	ENSCHIG00000021000	CHD9	99	82.873	Capra_hircus
ENSAPLG00000002826	CHD9	74	85.915	ENSTSYG00000007693	CHD9	98	92.308	Carlito_syrichta
ENSAPLG00000002826	CHD9	91	82.746	ENSCAPG00000011604	CHD9	96	70.599	Cavia_aperea
ENSAPLG00000002826	CHD9	74	81.840	ENSCPOG00000036544	CHD9	99	80.493	Cavia_porcellus
ENSAPLG00000002826	CHD9	74	85.641	ENSCCAG00000036178	CHD9	98	91.941	Cebus_capucinus
ENSAPLG00000002826	CHD9	74	85.875	ENSCATG00000036753	CHD9	98	91.941	Cercocebus_atys
ENSAPLG00000002826	CHD9	74	86.016	ENSCLAG00000007137	CHD9	99	91.945	Chinchilla_lanigera
ENSAPLG00000002826	CHD9	74	85.875	ENSCSAG00000005311	CHD9	99	83.773	Chlorocebus_sabaeus
ENSAPLG00000002826	CHD9	74	94.231	ENSCHOG00000003935	CHD9	76	94.231	Choloepus_hoffmanni
ENSAPLG00000002826	CHD9	92	95.300	ENSCPBG00000012459	CHD9	99	95.300	Chrysemys_picta_bellii
ENSAPLG00000002826	CHD9	74	85.922	ENSCANG00000030349	CHD9	98	91.941	Colobus_angolensis_palliatus
ENSAPLG00000002826	CHD9	74	83.904	ENSCGRG00001016150	Chd9	99	82.030	Cricetulus_griseus_chok1gshd
ENSAPLG00000002826	CHD9	74	83.904	ENSCGRG00000012850	Chd9	99	90.679	Cricetulus_griseus_crigri
ENSAPLG00000002826	CHD9	80	69.880	ENSCSEG00000009209	chd9	98	68.092	Cynoglossus_semilaevis
ENSAPLG00000002826	CHD9	57	76.528	ENSCVAG00000016195	chd9	99	61.546	Cyprinodon_variegatus
ENSAPLG00000002826	CHD9	56	75.518	ENSDARG00000074498	chd9	98	68.852	Danio_rerio
ENSAPLG00000002826	CHD9	55	90.955	ENSDNOG00000006045	CHD9	99	86.492	Dasypus_novemcinctus
ENSAPLG00000002826	CHD9	81	92.632	ENSETEG00000009565	CHD9	93	92.632	Echinops_telfairi
ENSAPLG00000002826	CHD9	89	89.271	ENSEASG00005014832	CHD9	99	91.035	Equus_asinus_asinus
ENSAPLG00000002826	CHD9	74	85.734	ENSECAG00000011505	CHD9	99	83.906	Equus_caballus
ENSAPLG00000002826	CHD9	73	92.265	ENSEEUG00000014515	CHD9	86	92.265	Erinaceus_europaeus
ENSAPLG00000002826	CHD9	74	77.083	ENSELUG00000006031	chd9	97	68.107	Esox_lucius
ENSAPLG00000002826	CHD9	74	85.828	ENSFCAG00000022534	CHD9	98	91.575	Felis_catus
ENSAPLG00000002826	CHD9	57	97.209	ENSFALG00000013276	CHD9	68	97.209	Ficedula_albicollis
ENSAPLG00000002826	CHD9	74	85.453	ENSFDAG00000021037	CHD9	99	83.513	Fukomys_damarensis
ENSAPLG00000002826	CHD9	79	71.721	ENSFHEG00000006068	chd9	99	69.412	Fundulus_heteroclitus
ENSAPLG00000002826	CHD9	68	77.612	ENSGMOG00000006040	chd9	83	77.815	Gadus_morhua
ENSAPLG00000002826	CHD9	74	96.561	ENSGALG00000039178	CHD9	98	94.940	Gallus_gallus
ENSAPLG00000002826	CHD9	61	76.960	ENSGAFG00000010014	chd9	98	68.745	Gambusia_affinis
ENSAPLG00000002826	CHD9	81	68.319	ENSGACG00000016694	chd9	96	76.413	Gasterosteus_aculeatus
ENSAPLG00000002826	CHD9	74	86.016	ENSGGOG00000014816	CHD9	98	92.308	Gorilla_gorilla
ENSAPLG00000002826	CHD9	84	71.734	ENSHBUG00000023322	chd9	98	70.526	Haplochromis_burtoni
ENSAPLG00000002826	CHD9	74	85.828	ENSHGLG00000014938	CHD9	99	91.830	Heterocephalus_glaber_female
ENSAPLG00000002826	CHD9	90	66.747	ENSHCOG00000000937	chd9	99	67.272	Hippocampus_comes
ENSAPLG00000002826	CHD9	82	70.278	ENSIPUG00000016448	chd9	97	73.723	Ictalurus_punctatus
ENSAPLG00000002826	CHD9	74	85.453	ENSSTOG00000022273	CHD9	99	91.715	Ictidomys_tridecemlineatus
ENSAPLG00000002826	CHD9	61	76.779	ENSKMAG00000016784	chd9	94	70.898	Kryptolebias_marmoratus
ENSAPLG00000002826	CHD9	88	65.346	ENSLBEG00000012077	chd9	98	68.868	Labrus_bergylta
ENSAPLG00000002826	CHD9	74	74.826	ENSLACG00000005557	CHD9	73	74.561	Latimeria_chalumnae
ENSAPLG00000002826	CHD9	87	73.941	ENSLOCG00000007225	chd9	68	80.801	Lepisosteus_oculatus
ENSAPLG00000002826	CHD9	74	85.835	ENSLAFG00000015374	CHD9	99	83.877	Loxodonta_africana
ENSAPLG00000002826	CHD9	74	85.922	ENSMFAG00000041354	CHD9	98	91.941	Macaca_fascicularis
ENSAPLG00000002826	CHD9	74	85.922	ENSMMUG00000016310	CHD9	98	91.941	Macaca_mulatta
ENSAPLG00000002826	CHD9	74	85.875	ENSMNEG00000031494	CHD9	100	84.754	Macaca_nemestrina
ENSAPLG00000002826	CHD9	74	85.922	ENSMLEG00000043219	CHD9	98	91.941	Mandrillus_leucophaeus
ENSAPLG00000002826	CHD9	56	77.406	ENSMAMG00000003909	chd9	99	61.364	Mastacembelus_armatus
ENSAPLG00000002826	CHD9	79	71.927	ENSMZEG00005006581	chd9	98	69.476	Maylandia_zebra
ENSAPLG00000002826	CHD9	95	90.262	ENSMGAG00000004642	CHD9	72	91.335	Meleagris_gallopavo
ENSAPLG00000002826	CHD9	74	86.110	ENSMICG00000016679	CHD9	98	91.209	Microcebus_murinus
ENSAPLG00000002826	CHD9	73	82.955	ENSMODG00000013142	-	99	82.938	Monodelphis_domestica
ENSAPLG00000002826	CHD9	74	83.302	MGP_CAROLIEiJ_G0031364	Chd9	99	81.339	Mus_caroli
ENSAPLG00000002826	CHD9	74	82.880	ENSMUSG00000056608	Chd9	99	89.988	Mus_musculus
ENSAPLG00000002826	CHD9	97	82.974	MGP_PahariEiJ_G0022964	Chd9	99	79.556	Mus_pahari
ENSAPLG00000002826	CHD9	74	82.833	MGP_SPRETEiJ_G0032483	Chd9	99	80.979	Mus_spretus
ENSAPLG00000002826	CHD9	74	86.204	ENSMPUG00000003285	CHD9	99	84.672	Mustela_putorius_furo
ENSAPLG00000002826	CHD9	74	85.875	ENSMLUG00000004456	CHD9	99	83.513	Myotis_lucifugus
ENSAPLG00000002826	CHD9	79	71.026	ENSNBRG00000009423	chd9	98	69.095	Neolamprologus_brichardi
ENSAPLG00000002826	CHD9	74	85.969	ENSNLEG00000001026	CHD9	100	84.642	Nomascus_leucogenys
ENSAPLG00000002826	CHD9	70	100.000	ENSMEUG00000008222	-	84	100.000	Notamacropus_eugenii
ENSAPLG00000002826	CHD9	71	97.744	ENSOPRG00000011168	CHD9	85	95.429	Ochotona_princeps
ENSAPLG00000002826	CHD9	74	85.413	ENSODEG00000004466	CHD9	99	83.206	Octodon_degus
ENSAPLG00000002826	CHD9	61	77.508	ENSONIG00000002816	chd9	99	70.555	Oreochromis_niloticus
ENSAPLG00000002826	CHD9	74	87.653	ENSOANG00000013401	CHD9	99	85.878	Ornithorhynchus_anatinus
ENSAPLG00000002826	CHD9	57	91.201	ENSOCUG00000001016	CHD9	98	87.495	Oryctolagus_cuniculus
ENSAPLG00000002826	CHD9	79	69.710	ENSORLG00000013810	chd9	94	70.561	Oryzias_latipes
ENSAPLG00000002826	CHD9	62	76.634	ENSORLG00015019126	chd9	94	70.642	Oryzias_latipes_hsok
ENSAPLG00000002826	CHD9	74	85.500	ENSOGAG00000002110	CHD9	99	83.588	Otolemur_garnettii
ENSAPLG00000002826	CHD9	74	86.036	ENSOARG00000017664	CHD9	99	83.773	Ovis_aries
ENSAPLG00000002826	CHD9	57	89.878	ENSPPAG00000039388	-	99	86.276	Pan_paniscus
ENSAPLG00000002826	CHD9	74	85.781	ENSPPRG00000004801	CHD9	98	91.209	Panthera_pardus
ENSAPLG00000002826	CHD9	74	84.327	ENSPTIG00000021854	CHD9	99	82.749	Panthera_tigris_altaica
ENSAPLG00000002826	CHD9	74	86.063	ENSPTRG00000008113	CHD9	98	92.308	Pan_troglodytes
ENSAPLG00000002826	CHD9	74	85.922	ENSPANG00000019307	CHD9	98	91.941	Papio_anubis
ENSAPLG00000002826	CHD9	99	59.932	ENSPKIG00000025401	-	99	60.272	Paramormyrops_kingsleyae
ENSAPLG00000002826	CHD9	74	65.702	ENSPKIG00000021876	chd9	99	71.068	Paramormyrops_kingsleyae
ENSAPLG00000002826	CHD9	64	90.786	ENSPSIG00000008099	CHD9	99	90.786	Pelodiscus_sinensis
ENSAPLG00000002826	CHD9	89	85.653	ENSPCIG00000017215	CHD9	97	90.903	Phascolarctos_cinereus
ENSAPLG00000002826	CHD9	56	77.437	ENSPFOG00000015839	chd9	99	60.889	Poecilia_formosa
ENSAPLG00000002826	CHD9	56	77.771	ENSPLAG00000011118	chd9	98	69.702	Poecilia_latipinna
ENSAPLG00000002826	CHD9	56	77.141	ENSPMEG00000015106	chd9	99	61.334	Poecilia_mexicana
ENSAPLG00000002826	CHD9	56	77.534	ENSPREG00000006473	chd9	98	68.615	Poecilia_reticulata
ENSAPLG00000002826	CHD9	74	86.157	ENSPPYG00000007348	CHD9	99	84.386	Pongo_abelii
ENSAPLG00000002826	CHD9	73	91.743	ENSPCAG00000007564	CHD9	86	91.743	Procavia_capensis
ENSAPLG00000002826	CHD9	74	84.280	ENSPCOG00000028433	CHD9	98	92.308	Propithecus_coquereli
ENSAPLG00000002826	CHD9	85	80.689	ENSPVAG00000015617	CHD9	97	80.689	Pteropus_vampyrus
ENSAPLG00000002826	CHD9	79	71.362	ENSPNYG00000010947	chd9	98	69.388	Pundamilia_nyererei
ENSAPLG00000002826	CHD9	74	65.638	ENSPNAG00000024141	chd9	99	70.672	Pygocentrus_nattereri
ENSAPLG00000002826	CHD9	74	80.309	ENSRNOG00000049302	Chd9	100	81.547	Rattus_norvegicus
ENSAPLG00000002826	CHD9	57	91.185	ENSRBIG00000035553	CHD9	98	91.941	Rhinopithecus_bieti
ENSAPLG00000002826	CHD9	56	91.307	ENSRROG00000033278	CHD9	98	91.941	Rhinopithecus_roxellana
ENSAPLG00000002826	CHD9	74	85.781	ENSSBOG00000030240	CHD9	98	92.308	Saimiri_boliviensis_boliviensis
ENSAPLG00000002826	CHD9	74	87.852	ENSSHAG00000002719	CHD9	99	85.571	Sarcophilus_harrisii
ENSAPLG00000002826	CHD9	85	67.210	ENSSFOG00015001327	chd9	98	69.259	Scleropages_formosus
ENSAPLG00000002826	CHD9	74	65.460	ENSSFOG00015020209	chd9	99	70.336	Scleropages_formosus
ENSAPLG00000002826	CHD9	84	70.192	ENSSMAG00000008953	chd9	95	70.253	Scophthalmus_maximus
ENSAPLG00000002826	CHD9	79	72.556	ENSSDUG00000006139	chd9	98	70.073	Seriola_dumerili
ENSAPLG00000002826	CHD9	61	77.433	ENSSLDG00000017818	chd9	98	69.848	Seriola_lalandi_dorsalis
ENSAPLG00000002826	CHD9	71	92.038	ENSSARG00000010632	CHD9	71	92.038	Sorex_araneus
ENSAPLG00000002826	CHD9	79	71.743	ENSSPAG00000021649	chd9	98	69.721	Stegastes_partitus
ENSAPLG00000002826	CHD9	99	83.275	ENSSSCG00000033591	CHD9	99	83.717	Sus_scrofa
ENSAPLG00000002826	CHD9	74	96.000	ENSTGUG00000007476	CHD9	100	94.438	Taeniopygia_guttata
ENSAPLG00000002826	CHD9	61	76.867	ENSTRUG00000009125	chd9	95	66.540	Takifugu_rubripes
ENSAPLG00000002826	CHD9	57	83.902	ENSTNIG00000003825	chd9	89	83.902	Tetraodon_nigroviridis
ENSAPLG00000002826	CHD9	67	81.532	ENSTBEG00000016052	-	81	81.532	Tupaia_belangeri
ENSAPLG00000002826	CHD9	74	85.875	ENSTTRG00000012674	CHD9	90	83.455	Tursiops_truncatus
ENSAPLG00000002826	CHD9	65	94.776	ENSUMAG00000004043	CHD9	97	94.776	Ursus_maritimus
ENSAPLG00000002826	CHD9	50	82.275	ENSVPAG00000001374	CHD9	97	85.693	Vicugna_pacos
ENSAPLG00000002826	CHD9	74	85.875	ENSVVUG00000019435	CHD9	99	84.218	Vulpes_vulpes
ENSAPLG00000002826	CHD9	99	74.896	ENSXETG00000000349	chd9	96	78.369	Xenopus_tropicalis
ENSAPLG00000002826	CHD9	56	77.289	ENSXCOG00000012997	chd9	98	69.402	Xiphophorus_couchianus
ENSAPLG00000002826	CHD9	56	77.303	ENSXMAG00000016192	chd9	99	70.024	Xiphophorus_maculatus