EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000002964 (Gene tree)
Gene ID: 101800237
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 23803 bases
Position: chrKB742907.1:649939-673741
Accession: 101800237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000002431	DND1_DSRM	PF14709.7	6.6e-25	1	1
ENSAPLP00000002431	RRM_1	PF00076.22	1.1e-40	1	3
ENSAPLP00000002431	RRM_1	PF00076.22	1.1e-40	2	3
ENSAPLP00000002431	RRM_1	PF00076.22	1.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000003020	A1CF-201	1770	XM_005017316	ENSAPLP00000002431	589 (aa)	XP_005017373	R0JZB9

Gene Model

Click here to download ENSAPLG00000002964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000002964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000002964	A1CF	88	70.530	ENSAPLG00000005116	RBM46	98	70.530
ENSAPLG00000002964	A1CF	75	58.499	ENSAPLG00000013974	RBM47	74	58.889
ENSAPLG00000002964	A1CF	64	45.692	ENSAPLG00000009918	SYNCRIP	70	45.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000002964	A1CF	100	88.908	ENSG00000148584	A1CF	100	95.522	Homo_sapiens
ENSAPLG00000002964	A1CF	100	72.879	ENSAPOG00000008259	a1cf	100	73.045	Acanthochromis_polyacanthus
ENSAPLG00000002964	A1CF	100	88.027	ENSAMEG00000000523	A1CF	100	88.533	Ailuropoda_melanoleuca
ENSAPLG00000002964	A1CF	100	75.204	ENSACIG00000008632	a1cf	100	76.672	Amphilophus_citrinellus
ENSAPLG00000002964	A1CF	100	73.563	ENSAOCG00000023744	a1cf	96	84.348	Amphiprion_ocellaris
ENSAPLG00000002964	A1CF	100	74.548	ENSAPEG00000009537	a1cf	100	75.534	Amphiprion_percula
ENSAPLG00000002964	A1CF	100	75.896	ENSATEG00000013720	a1cf	100	77.362	Anabas_testudineus
ENSAPLG00000002964	A1CF	100	87.119	ENSACAG00000015269	A1CF	100	87.119	Anolis_carolinensis
ENSAPLG00000002964	A1CF	100	87.395	ENSANAG00000019974	A1CF	100	87.395	Aotus_nancymaae
ENSAPLG00000002964	A1CF	100	74.257	ENSACLG00000017428	a1cf	100	76.073	Astatotilapia_calliptera
ENSAPLG00000002964	A1CF	100	75.537	ENSAMXG00000018180	a1cf	100	75.537	Astyanax_mexicanus
ENSAPLG00000002964	A1CF	100	86.577	ENSBTAG00000021195	A1CF	100	89.031	Bos_taurus
ENSAPLG00000002964	A1CF	100	89.076	ENSCJAG00000005045	A1CF	100	89.076	Callithrix_jacchus
ENSAPLG00000002964	A1CF	100	88.682	ENSCAFG00000015581	A1CF	100	89.020	Canis_familiaris
ENSAPLG00000002964	A1CF	100	88.682	ENSCAFG00020026421	A1CF	98	91.216	Canis_lupus_dingo
ENSAPLG00000002964	A1CF	100	87.919	ENSCHIG00000020411	A1CF	100	87.919	Capra_hircus
ENSAPLG00000002964	A1CF	97	85.641	ENSTSYG00000001755	A1CF	100	87.679	Carlito_syrichta
ENSAPLG00000002964	A1CF	100	79.755	ENSCAPG00000017386	A1CF	100	79.448	Cavia_aperea
ENSAPLG00000002964	A1CF	100	87.899	ENSCPOG00000009807	A1CF	100	88.403	Cavia_porcellus
ENSAPLG00000002964	A1CF	100	89.394	ENSCCAG00000018168	A1CF	100	89.394	Cebus_capucinus
ENSAPLG00000002964	A1CF	100	88.027	ENSCATG00000043715	A1CF	100	88.027	Cercocebus_atys
ENSAPLG00000002964	A1CF	100	87.605	ENSCLAG00000010424	A1CF	100	87.605	Chinchilla_lanigera
ENSAPLG00000002964	A1CF	100	89.713	ENSCSAG00000007032	A1CF	100	89.713	Chlorocebus_sabaeus
ENSAPLG00000002964	A1CF	98	82.997	ENSCHOG00000009089	A1CF	99	82.997	Choloepus_hoffmanni
ENSAPLG00000002964	A1CF	100	93.220	ENSCPBG00000026464	A1CF	100	93.220	Chrysemys_picta_bellii
ENSAPLG00000002964	A1CF	100	89.376	ENSCANG00000038032	A1CF	100	89.376	Colobus_angolensis_palliatus
ENSAPLG00000002964	A1CF	100	86.913	ENSCGRG00001017413	A1cf	100	86.913	Cricetulus_griseus_chok1gshd
ENSAPLG00000002964	A1CF	100	86.242	ENSCGRG00000017332	A1cf	100	86.577	Cricetulus_griseus_crigri
ENSAPLG00000002964	A1CF	100	74.465	ENSCSEG00000002361	a1cf	100	76.285	Cynoglossus_semilaevis
ENSAPLG00000002964	A1CF	100	74.104	ENSCVAG00000010520	a1cf	100	75.570	Cyprinodon_variegatus
ENSAPLG00000002964	A1CF	100	79.766	ENSDARG00000002968	a1cf	100	81.271	Danio_rerio
ENSAPLG00000002964	A1CF	100	87.081	ENSDNOG00000002829	A1CF	100	87.584	Dasypus_novemcinctus
ENSAPLG00000002964	A1CF	81	90.942	ENSETEG00000012527	A1CF	81	90.942	Echinops_telfairi
ENSAPLG00000002964	A1CF	100	88.462	ENSEASG00005012924	A1CF	100	88.629	Equus_asinus_asinus
ENSAPLG00000002964	A1CF	100	88.127	ENSECAG00000010424	A1CF	100	88.294	Equus_caballus
ENSAPLG00000002964	A1CF	78	76.660	ENSEEUG00000000013	A1CF	100	76.660	Erinaceus_europaeus
ENSAPLG00000002964	A1CF	100	79.496	ENSELUG00000003159	a1cf	100	80.504	Esox_lucius
ENSAPLG00000002964	A1CF	100	86.509	ENSFCAG00000011179	A1CF	100	86.678	Felis_catus
ENSAPLG00000002964	A1CF	100	93.548	ENSFALG00000013183	A1CF	100	93.548	Ficedula_albicollis
ENSAPLG00000002964	A1CF	100	86.745	ENSFDAG00000019371	A1CF	100	86.913	Fukomys_damarensis
ENSAPLG00000002964	A1CF	100	68.123	ENSFHEG00000019652	a1cf	96	84.375	Fundulus_heteroclitus
ENSAPLG00000002964	A1CF	100	70.744	ENSGMOG00000018943	a1cf	100	70.413	Gadus_morhua
ENSAPLG00000002964	A1CF	95	96.057	ENSGALG00000003765	A1CF	97	96.057	Gallus_gallus
ENSAPLG00000002964	A1CF	100	70.395	ENSGAFG00000014868	a1cf	100	70.559	Gambusia_affinis
ENSAPLG00000002964	A1CF	100	73.563	ENSGACG00000010241	a1cf	100	74.056	Gasterosteus_aculeatus
ENSAPLG00000002964	A1CF	94	92.998	ENSGAGG00000016508	A1CF	97	92.998	Gopherus_agassizii
ENSAPLG00000002964	A1CF	100	89.076	ENSGGOG00000009670	A1CF	100	89.076	Gorilla_gorilla
ENSAPLG00000002964	A1CF	100	75.041	ENSHBUG00000021959	a1cf	100	77.162	Haplochromis_burtoni
ENSAPLG00000002964	A1CF	100	88.591	ENSHGLG00000008955	A1CF	100	88.591	Heterocephalus_glaber_female
ENSAPLG00000002964	A1CF	100	87.919	ENSHGLG00100000518	A1CF	100	87.919	Heterocephalus_glaber_male
ENSAPLG00000002964	A1CF	95	72.241	ENSHCOG00000017669	a1cf	100	73.083	Hippocampus_comes
ENSAPLG00000002964	A1CF	90	84.515	ENSIPUG00000010367	a1cf	97	83.978	Ictalurus_punctatus
ENSAPLG00000002964	A1CF	100	76.423	ENSKMAG00000006568	a1cf	100	77.236	Kryptolebias_marmoratus
ENSAPLG00000002964	A1CF	99	74.959	ENSLBEG00000020994	a1cf	99	76.268	Labrus_bergylta
ENSAPLG00000002964	A1CF	100	83.811	ENSLACG00000008061	A1CF	100	83.811	Latimeria_chalumnae
ENSAPLG00000002964	A1CF	100	84.175	ENSLOCG00000006302	a1cf	100	84.175	Lepisosteus_oculatus
ENSAPLG00000002964	A1CF	100	88.591	ENSLAFG00000015462	A1CF	100	88.926	Loxodonta_africana
ENSAPLG00000002964	A1CF	100	88.364	ENSMFAG00000035948	A1CF	100	88.364	Macaca_fascicularis
ENSAPLG00000002964	A1CF	100	88.364	ENSMMUG00000007077	A1CF	100	88.364	Macaca_mulatta
ENSAPLG00000002964	A1CF	100	88.027	ENSMNEG00000031454	A1CF	100	88.027	Macaca_nemestrina
ENSAPLG00000002964	A1CF	100	89.376	ENSMLEG00000037223	A1CF	100	89.376	Mandrillus_leucophaeus
ENSAPLG00000002964	A1CF	100	73.322	ENSMAMG00000010402	a1cf	100	75.123	Mastacembelus_armatus
ENSAPLG00000002964	A1CF	100	78.020	ENSMZEG00005013245	a1cf	100	79.027	Maylandia_zebra
ENSAPLG00000002964	A1CF	100	96.441	ENSMGAG00000001507	A1CF	100	96.441	Meleagris_gallopavo
ENSAPLG00000002964	A1CF	100	86.242	ENSMAUG00000007422	A1cf	100	86.745	Mesocricetus_auratus
ENSAPLG00000002964	A1CF	100	86.477	ENSMICG00000003377	A1CF	100	86.811	Microcebus_murinus
ENSAPLG00000002964	A1CF	100	86.913	ENSMOCG00000021536	A1cf	100	86.913	Microtus_ochrogaster
ENSAPLG00000002964	A1CF	100	66.667	ENSMMOG00000009422	a1cf	100	68.709	Mola_mola
ENSAPLG00000002964	A1CF	92	88.991	ENSMODG00000016478	A1CF	99	89.174	Monodelphis_domestica
ENSAPLG00000002964	A1CF	100	72.773	ENSMALG00000012992	a1cf	100	72.773	Monopterus_albus
ENSAPLG00000002964	A1CF	100	86.409	MGP_CAROLIEiJ_G0022873	A1cf	100	86.577	Mus_caroli
ENSAPLG00000002964	A1CF	100	86.409	ENSMUSG00000052595	A1cf	99	91.842	Mus_musculus
ENSAPLG00000002964	A1CF	100	85.906	MGP_PahariEiJ_G0014366	A1cf	100	85.906	Mus_pahari
ENSAPLG00000002964	A1CF	100	86.242	MGP_SPRETEiJ_G0023792	A1cf	100	86.577	Mus_spretus
ENSAPLG00000002964	A1CF	100	82.125	ENSMPUG00000016971	A1CF	100	82.631	Mustela_putorius_furo
ENSAPLG00000002964	A1CF	100	87.081	ENSMLUG00000016071	A1CF	100	87.416	Myotis_lucifugus
ENSAPLG00000002964	A1CF	100	87.919	ENSNGAG00000015136	A1cf	100	88.591	Nannospalax_galili
ENSAPLG00000002964	A1CF	100	75.041	ENSNBRG00000001712	a1cf	100	77.162	Neolamprologus_brichardi
ENSAPLG00000002964	A1CF	100	89.094	ENSNLEG00000012028	A1CF	100	89.094	Nomascus_leucogenys
ENSAPLG00000002964	A1CF	94	89.427	ENSMEUG00000015909	A1CF	100	89.427	Notamacropus_eugenii
ENSAPLG00000002964	A1CF	89	80.798	ENSOPRG00000010667	A1CF	97	80.263	Ochotona_princeps
ENSAPLG00000002964	A1CF	100	76.020	ENSONIG00000019105	a1cf	100	77.325	Oreochromis_niloticus
ENSAPLG00000002964	A1CF	79	87.580	ENSOANG00000007360	A1CF	99	87.580	Ornithorhynchus_anatinus
ENSAPLG00000002964	A1CF	100	85.260	ENSOCUG00000011587	A1CF	100	85.762	Oryctolagus_cuniculus
ENSAPLG00000002964	A1CF	100	76.073	ENSORLG00000013342	a1cf	100	75.658	Oryzias_latipes
ENSAPLG00000002964	A1CF	100	76.268	ENSORLG00020000586	a1cf	100	76.759	Oryzias_latipes_hni
ENSAPLG00000002964	A1CF	100	76.268	ENSORLG00015018569	a1cf	100	76.759	Oryzias_latipes_hsok
ENSAPLG00000002964	A1CF	100	75.614	ENSOMEG00000013531	a1cf	100	75.614	Oryzias_melastigma
ENSAPLG00000002964	A1CF	100	88.027	ENSOGAG00000012884	A1CF	100	88.364	Otolemur_garnettii
ENSAPLG00000002964	A1CF	100	87.752	ENSOARG00000013695	A1CF	100	87.752	Ovis_aries
ENSAPLG00000002964	A1CF	97	87.695	ENSPPAG00000028115	A1CF	99	93.117	Pan_paniscus
ENSAPLG00000002964	A1CF	100	88.196	ENSPPRG00000012180	A1CF	100	88.364	Panthera_pardus
ENSAPLG00000002964	A1CF	100	88.196	ENSPTIG00000021223	A1CF	100	88.364	Panthera_tigris_altaica
ENSAPLG00000002964	A1CF	100	89.244	ENSPTRG00000002508	A1CF	100	89.244	Pan_troglodytes
ENSAPLG00000002964	A1CF	100	88.364	ENSPANG00000021988	A1CF	100	88.364	Papio_anubis
ENSAPLG00000002964	A1CF	100	81.407	ENSPKIG00000025176	a1cf	100	81.407	Paramormyrops_kingsleyae
ENSAPLG00000002964	A1CF	100	91.186	ENSPSIG00000010318	A1CF	100	91.186	Pelodiscus_sinensis
ENSAPLG00000002964	A1CF	98	66.207	ENSPMGG00000013359	a1cf	99	66.952	Periophthalmus_magnuspinnatus
ENSAPLG00000002964	A1CF	100	88.423	ENSPEMG00000015021	A1cf	100	88.423	Peromyscus_maniculatus_bairdii
ENSAPLG00000002964	A1CF	100	88.494	ENSPCIG00000002175	A1CF	100	88.494	Phascolarctos_cinereus
ENSAPLG00000002964	A1CF	100	75.896	ENSPFOG00000007437	-	100	77.362	Poecilia_formosa
ENSAPLG00000002964	A1CF	100	76.059	ENSPFOG00000006683	a1cf	100	77.524	Poecilia_formosa
ENSAPLG00000002964	A1CF	100	74.756	ENSPLAG00000000026	a1cf	100	76.221	Poecilia_latipinna
ENSAPLG00000002964	A1CF	100	74.756	ENSPLAG00000001210	-	100	76.221	Poecilia_latipinna
ENSAPLG00000002964	A1CF	100	68.791	ENSPMEG00000015529	-	100	70.261	Poecilia_mexicana
ENSAPLG00000002964	A1CF	100	67.647	ENSPMEG00000000921	a1cf	100	69.118	Poecilia_mexicana
ENSAPLG00000002964	A1CF	100	75.733	ENSPREG00000016298	a1cf	100	77.362	Poecilia_reticulata
ENSAPLG00000002964	A1CF	100	87.919	ENSPPYG00000002819	A1CF	100	87.919	Pongo_abelii
ENSAPLG00000002964	A1CF	71	78.495	ENSPCAG00000006463	A1CF	68	78.495	Procavia_capensis
ENSAPLG00000002964	A1CF	100	87.772	ENSPCOG00000024172	A1CF	100	88.107	Propithecus_coquereli
ENSAPLG00000002964	A1CF	100	76.346	ENSPNYG00000017944	a1cf	100	78.467	Pundamilia_nyererei
ENSAPLG00000002964	A1CF	100	80.629	ENSPNAG00000007704	a1cf	100	80.629	Pygocentrus_nattereri
ENSAPLG00000002964	A1CF	100	85.403	ENSRNOG00000033195	A1cf	100	85.570	Rattus_norvegicus
ENSAPLG00000002964	A1CF	100	83.193	ENSRBIG00000042892	A1CF	100	86.444	Rhinopithecus_bieti
ENSAPLG00000002964	A1CF	100	89.713	ENSRROG00000041398	A1CF	100	89.713	Rhinopithecus_roxellana
ENSAPLG00000002964	A1CF	100	89.094	ENSSBOG00000021930	A1CF	100	89.094	Saimiri_boliviensis_boliviensis
ENSAPLG00000002964	A1CF	100	90.219	ENSSHAG00000005096	A1CF	100	90.219	Sarcophilus_harrisii
ENSAPLG00000002964	A1CF	100	79.768	ENSSFOG00015011774	a1cf	100	80.100	Scleropages_formosus
ENSAPLG00000002964	A1CF	100	75.570	ENSSMAG00000013271	a1cf	100	75.896	Scophthalmus_maximus
ENSAPLG00000002964	A1CF	100	75.497	ENSSDUG00000013930	a1cf	100	76.490	Seriola_dumerili
ENSAPLG00000002964	A1CF	100	69.522	ENSSLDG00000004290	a1cf	100	69.522	Seriola_lalandi_dorsalis
ENSAPLG00000002964	A1CF	95	77.249	ENSSARG00000005940	A1CF	96	77.778	Sorex_araneus
ENSAPLG00000002964	A1CF	95	90.391	ENSSPUG00000006797	A1CF	95	90.036	Sphenodon_punctatus
ENSAPLG00000002964	A1CF	100	88.591	ENSSSCG00000010431	A1CF	100	88.758	Sus_scrofa
ENSAPLG00000002964	A1CF	100	93.467	ENSTGUG00000005090	A1CF	100	93.467	Taeniopygia_guttata
ENSAPLG00000002964	A1CF	100	75.693	ENSTRUG00000001982	a1cf	100	75.693	Takifugu_rubripes
ENSAPLG00000002964	A1CF	100	75.610	ENSTNIG00000003580	a1cf	100	75.935	Tetraodon_nigroviridis
ENSAPLG00000002964	A1CF	97	80.796	ENSTTRG00000013190	A1CF	95	80.969	Tursiops_truncatus
ENSAPLG00000002964	A1CF	100	86.847	ENSUAMG00000020065	A1CF	100	87.015	Ursus_americanus
ENSAPLG00000002964	A1CF	100	88.325	ENSUMAG00000011162	A1CF	100	88.494	Ursus_maritimus
ENSAPLG00000002964	A1CF	87	84.291	ENSVPAG00000006130	A1CF	86	84.291	Vicugna_pacos
ENSAPLG00000002964	A1CF	100	87.669	ENSVVUG00000002504	A1CF	99	89.668	Vulpes_vulpes
ENSAPLG00000002964	A1CF	100	80.303	ENSXETG00000006611	a1cf	100	80.303	Xenopus_tropicalis
ENSAPLG00000002964	A1CF	100	75.902	ENSXCOG00000003302	a1cf	100	76.885	Xiphophorus_couchianus
ENSAPLG00000002964	A1CF	100	77.049	ENSXMAG00000016703	a1cf	100	78.033	Xiphophorus_maculatus