EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000003373 (Gene tree)
Gene ID: 101798846
Gene Symbol: GFI1B
Alias: -
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 9854 bases
Position: chrKB742651.1:1612123-1621976
Accession: 101798846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000002863	zf-C2H2	PF00096.26	6.6e-28	1	6
ENSAPLP00000002863	zf-C2H2	PF00096.26	6.6e-28	2	6
ENSAPLP00000002863	zf-C2H2	PF00096.26	6.6e-28	3	6
ENSAPLP00000002863	zf-C2H2	PF00096.26	6.6e-28	4	6
ENSAPLP00000002863	zf-C2H2	PF00096.26	6.6e-28	5	6
ENSAPLP00000002863	zf-C2H2	PF00096.26	6.6e-28	6	6
ENSAPLP00000002863	zf-met	PF12874.7	1.8e-08	1	2
ENSAPLP00000002863	zf-met	PF12874.7	1.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000003457	GFI1B-201	1186	XM_005013257	ENSAPLP00000002863	335 (aa)	XP_005013314	R0LZS9

Gene Model

Click here to download ENSAPLG00000003373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000003373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000003373	GFI1B	67	38.686	ENSAPLG00000002277	ZNF319	98	41.615
ENSAPLG00000003373	GFI1B	53	41.071	ENSAPLG00000011730	SCRT2	94	41.071
ENSAPLG00000003373	GFI1B	68	47.059	ENSAPLG00000014682	ZNF236	58	47.059
ENSAPLG00000003373	GFI1B	66	37.736	ENSAPLG00000003518	-	51	37.736
ENSAPLG00000003373	GFI1B	56	41.250	ENSAPLG00000014760	-	100	41.250
ENSAPLG00000003373	GFI1B	53	42.667	ENSAPLG00000015935	SCRT1	50	42.667
ENSAPLG00000003373	GFI1B	53	43.976	ENSAPLG00000012660	-	81	43.976
ENSAPLG00000003373	GFI1B	84	34.969	ENSAPLG00000001239	PRDM15	53	34.969
ENSAPLG00000003373	GFI1B	54	44.231	ENSAPLG00000007481	MYNN	56	44.231
ENSAPLG00000003373	GFI1B	52	35.632	ENSAPLG00000001861	-	96	35.632
ENSAPLG00000003373	GFI1B	69	35.772	ENSAPLG00000014633	-	63	37.647
ENSAPLG00000003373	GFI1B	58	37.126	ENSAPLG00000015467	ZBTB48	79	37.126
ENSAPLG00000003373	GFI1B	59	38.462	ENSAPLG00000013828	PRDM5	77	38.462
ENSAPLG00000003373	GFI1B	52	35.227	ENSAPLG00000016199	OVOL2	69	35.227
ENSAPLG00000003373	GFI1B	57	48.551	ENSAPLG00000004595	ZNF672	97	48.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000003373	GFI1B	100	59.347	ENSAPOG00000001296	gfi1b	100	59.347	Acanthochromis_polyacanthus
ENSAPLG00000003373	GFI1B	67	74.222	ENSACIG00000002190	gfi1b	74	74.222	Amphilophus_citrinellus
ENSAPLG00000003373	GFI1B	100	60.058	ENSAOCG00000021187	gfi1b	100	60.058	Amphiprion_ocellaris
ENSAPLG00000003373	GFI1B	100	60.177	ENSAPEG00000016196	gfi1b	100	60.177	Amphiprion_percula
ENSAPLG00000003373	GFI1B	100	60.117	ENSATEG00000002534	gfi1b	100	60.117	Anabas_testudineus
ENSAPLG00000003373	GFI1B	100	58.772	ENSACLG00000027053	gfi1b	100	58.772	Astatotilapia_calliptera
ENSAPLG00000003373	GFI1B	100	63.265	ENSAMXG00000037544	GFI1B	100	63.265	Astyanax_mexicanus
ENSAPLG00000003373	GFI1B	100	66.374	ENSCAPG00000010404	GFI1B	100	66.374	Cavia_aperea
ENSAPLG00000003373	GFI1B	100	80.702	ENSCPBG00000021186	GFI1B	100	80.702	Chrysemys_picta_bellii
ENSAPLG00000003373	GFI1B	100	58.702	ENSCSEG00000001315	gfi1b	100	58.702	Cynoglossus_semilaevis
ENSAPLG00000003373	GFI1B	100	57.864	ENSCVAG00000017168	gfi1b	100	57.864	Cyprinodon_variegatus
ENSAPLG00000003373	GFI1B	100	61.449	ENSDARG00000079947	gfi1b	97	78.448	Danio_rerio
ENSAPLG00000003373	GFI1B	63	59.048	ENSEEUG00000012609	-	93	59.048	Erinaceus_europaeus
ENSAPLG00000003373	GFI1B	100	60.472	ENSELUG00000016933	gfi1b	100	60.472	Esox_lucius
ENSAPLG00000003373	GFI1B	100	81.818	ENSFALG00000001479	GFI1B	100	81.818	Ficedula_albicollis
ENSAPLG00000003373	GFI1B	100	58.551	ENSFHEG00000015138	gfi1b	100	58.551	Fundulus_heteroclitus
ENSAPLG00000003373	GFI1B	69	75.966	ENSGMOG00000019123	gfi1b	87	75.966	Gadus_morhua
ENSAPLG00000003373	GFI1B	100	91.395	ENSGALG00000003478	GFI1B	100	91.395	Gallus_gallus
ENSAPLG00000003373	GFI1B	69	72.845	ENSGAFG00000003059	gfi1b	98	72.845	Gambusia_affinis
ENSAPLG00000003373	GFI1B	100	55.182	ENSGACG00000018134	gfi1b	100	55.182	Gasterosteus_aculeatus
ENSAPLG00000003373	GFI1B	100	82.388	ENSGAGG00000021327	GFI1B	100	82.388	Gopherus_agassizii
ENSAPLG00000003373	GFI1B	100	58.772	ENSHBUG00000005451	gfi1b	100	58.772	Haplochromis_burtoni
ENSAPLG00000003373	GFI1B	100	58.944	ENSHCOG00000013713	gfi1b	100	58.702	Hippocampus_comes
ENSAPLG00000003373	GFI1B	100	62.500	ENSIPUG00000012769	gfi1b	100	62.500	Ictalurus_punctatus
ENSAPLG00000003373	GFI1B	99	62.834	ENSJJAG00000016355	Gfi1b	100	62.834	Jaculus_jaculus
ENSAPLG00000003373	GFI1B	100	58.407	ENSKMAG00000016047	gfi1b	100	58.407	Kryptolebias_marmoratus
ENSAPLG00000003373	GFI1B	100	58.309	ENSLBEG00000020297	gfi1b	99	59.118	Labrus_bergylta
ENSAPLG00000003373	GFI1B	100	64.497	ENSLACG00000012207	GFI1B	100	64.497	Latimeria_chalumnae
ENSAPLG00000003373	GFI1B	100	58.726	ENSLOCG00000005750	gfi1b	100	58.726	Lepisosteus_oculatus
ENSAPLG00000003373	GFI1B	100	68.546	ENSLAFG00000022367	GFI1B	100	68.639	Loxodonta_africana
ENSAPLG00000003373	GFI1B	100	59.412	ENSMAMG00000003040	gfi1b	100	59.412	Mastacembelus_armatus
ENSAPLG00000003373	GFI1B	99	58.944	ENSMZEG00005015594	gfi1b	99	58.944	Maylandia_zebra
ENSAPLG00000003373	GFI1B	100	90.801	ENSMGAG00000006129	GFI1B	100	90.801	Meleagris_gallopavo
ENSAPLG00000003373	GFI1B	100	59.767	ENSMMOG00000011764	gfi1b	100	59.767	Mola_mola
ENSAPLG00000003373	GFI1B	100	63.243	ENSMODG00000012600	GFI1B	100	63.243	Monodelphis_domestica
ENSAPLG00000003373	GFI1B	100	59.118	ENSMALG00000004034	gfi1b	100	59.118	Monopterus_albus
ENSAPLG00000003373	GFI1B	99	69.139	ENSNGAG00000003333	Gfi1b	100	69.139	Nannospalax_galili
ENSAPLG00000003373	GFI1B	100	58.261	ENSNBRG00000012391	gfi1b	100	58.261	Neolamprologus_brichardi
ENSAPLG00000003373	GFI1B	100	57.391	ENSONIG00000013011	gfi1b	100	83.240	Oreochromis_niloticus
ENSAPLG00000003373	GFI1B	100	69.139	ENSOANG00000014723	GFI1B	100	69.139	Ornithorhynchus_anatinus
ENSAPLG00000003373	GFI1B	100	45.401	ENSORLG00000014390	GFI1B	96	49.474	Oryzias_latipes
ENSAPLG00000003373	GFI1B	100	57.270	ENSORLG00020003719	GFI1B	100	57.270	Oryzias_latipes_hni
ENSAPLG00000003373	GFI1B	100	57.270	ENSORLG00015017142	gfi1b	100	57.270	Oryzias_latipes_hsok
ENSAPLG00000003373	GFI1B	100	56.973	ENSOMEG00000015149	GFI1B	100	56.250	Oryzias_melastigma
ENSAPLG00000003373	GFI1B	100	67.733	ENSOGAG00000008879	GFI1B	100	67.733	Otolemur_garnettii
ENSAPLG00000003373	GFI1B	100	61.318	ENSPKIG00000007643	gfi1b	100	61.318	Paramormyrops_kingsleyae
ENSAPLG00000003373	GFI1B	100	78.947	ENSPSIG00000012112	GFI1B	100	78.947	Pelodiscus_sinensis
ENSAPLG00000003373	GFI1B	99	56.433	ENSPMGG00000006021	gfi1b	99	56.433	Periophthalmus_magnuspinnatus
ENSAPLG00000003373	GFI1B	100	64.151	ENSPCIG00000019724	GFI1B	100	64.151	Phascolarctos_cinereus
ENSAPLG00000003373	GFI1B	100	58.017	ENSPFOG00000003460	gfi1b	100	58.017	Poecilia_formosa
ENSAPLG00000003373	GFI1B	100	57.971	ENSPLAG00000021960	GFI1B	100	57.971	Poecilia_latipinna
ENSAPLG00000003373	GFI1B	100	58.480	ENSPLAG00000017181	GFI1B	100	58.480	Poecilia_latipinna
ENSAPLG00000003373	GFI1B	100	57.681	ENSPMEG00000019220	gfi1b	100	57.681	Poecilia_mexicana
ENSAPLG00000003373	GFI1B	100	57.681	ENSPMEG00000001556	GFI1B	100	57.681	Poecilia_mexicana
ENSAPLG00000003373	GFI1B	100	56.812	ENSPREG00000021718	gfi1b	100	56.812	Poecilia_reticulata
ENSAPLG00000003373	GFI1B	100	57.310	ENSPNYG00000018422	gfi1b	100	57.310	Pundamilia_nyererei
ENSAPLG00000003373	GFI1B	100	60.831	ENSPNAG00000021118	gfi1b	100	60.831	Pygocentrus_nattereri
ENSAPLG00000003373	GFI1B	100	59.409	ENSSHAG00000006462	GFI1B	100	59.409	Sarcophilus_harrisii
ENSAPLG00000003373	GFI1B	83	55.709	ENSSFOG00015011566	gfi1b	90	55.709	Scleropages_formosus
ENSAPLG00000003373	GFI1B	100	57.602	ENSSMAG00000015181	gfi1b	99	58.036	Scophthalmus_maximus
ENSAPLG00000003373	GFI1B	100	59.824	ENSSDUG00000011604	gfi1b	100	59.824	Seriola_dumerili
ENSAPLG00000003373	GFI1B	100	60.117	ENSSLDG00000013823	gfi1b	100	60.117	Seriola_lalandi_dorsalis
ENSAPLG00000003373	GFI1B	100	64.431	ENSSPUG00000016039	GFI1B	100	64.431	Sphenodon_punctatus
ENSAPLG00000003373	GFI1B	100	57.925	ENSSPAG00000022914	gfi1b	100	57.925	Stegastes_partitus
ENSAPLG00000003373	GFI1B	56	82.011	ENSTGUG00000015953	-	100	82.011	Taeniopygia_guttata
ENSAPLG00000003373	GFI1B	63	100.000	ENSTGUG00000005282	-	100	100.000	Taeniopygia_guttata
ENSAPLG00000003373	GFI1B	100	58.721	ENSTRUG00000004525	gfi1b	100	58.721	Takifugu_rubripes
ENSAPLG00000003373	GFI1B	100	58.580	ENSTNIG00000003834	gfi1b	100	58.580	Tetraodon_nigroviridis
ENSAPLG00000003373	GFI1B	100	53.509	ENSTBEG00000014459	GFI1B	100	53.509	Tupaia_belangeri
ENSAPLG00000003373	GFI1B	100	59.483	ENSXETG00000006263	gfi1b	100	59.770	Xenopus_tropicalis
ENSAPLG00000003373	GFI1B	100	57.971	ENSXMAG00000027589	gfi1b	100	57.971	Xiphophorus_maculatus