EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000003759 (Gene tree)
Gene ID: 101795707
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 22881 bases
Position: chrKB742808.1:4821641-4844521
Accession: 101795707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003306	AARP2CN	PF08142.12	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000003906	BMS1-201	4155	XM_005015749	ENSAPLP00000003306	1231 (aa)	XP_005015806	U3I7T5

Gene Model

Click here to download ENSAPLG00000003759's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000003759's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000003759	BMS1	100	72.478	ENSG00000165733	BMS1	95	72.414	Homo_sapiens
ENSAPLG00000003759	BMS1	71	72.125	ENSAPOG00000002296	bms1	95	60.969	Acanthochromis_polyacanthus
ENSAPLG00000003759	BMS1	100	71.463	ENSAMEG00000016834	BMS1	95	72.559	Ailuropoda_melanoleuca
ENSAPLG00000003759	BMS1	86	71.025	ENSACIG00000002588	bms1	81	77.307	Amphilophus_citrinellus
ENSAPLG00000003759	BMS1	83	70.973	ENSAOCG00000018088	bms1	95	62.693	Amphiprion_ocellaris
ENSAPLG00000003759	BMS1	81	71.591	ENSAPEG00000014673	bms1	95	61.947	Amphiprion_percula
ENSAPLG00000003759	BMS1	100	74.980	ENSACAG00000004537	-	96	74.720	Anolis_carolinensis
ENSAPLG00000003759	BMS1	100	72.052	ENSANAG00000023432	BMS1	95	72.106	Aotus_nancymaae
ENSAPLG00000003759	BMS1	86	70.775	ENSACLG00000001294	bms1	90	70.547	Astatotilapia_calliptera
ENSAPLG00000003759	BMS1	100	72.705	ENSBTAG00000012878	BMS1	95	73.102	Bos_taurus
ENSAPLG00000003759	BMS1	79	52.771	WBGene00022021	Y61A9LA.10	94	50.667	Caenorhabditis_elegans
ENSAPLG00000003759	BMS1	100	72.456	ENSCJAG00000021705	BMS1	95	72.253	Callithrix_jacchus
ENSAPLG00000003759	BMS1	100	72.918	ENSCAFG00000007114	BMS1	95	72.779	Canis_familiaris
ENSAPLG00000003759	BMS1	100	72.918	ENSCAFG00020025282	BMS1	95	72.779	Canis_lupus_dingo
ENSAPLG00000003759	BMS1	100	72.823	ENSCHIG00000023251	BMS1	95	73.080	Capra_hircus
ENSAPLG00000003759	BMS1	100	67.874	ENSCAPG00000008652	BMS1	95	67.631	Cavia_aperea
ENSAPLG00000003759	BMS1	100	71.176	ENSCPOG00000000502	BMS1	96	71.210	Cavia_porcellus
ENSAPLG00000003759	BMS1	100	59.307	ENSCCAG00000024969	-	95	57.924	Cebus_capucinus
ENSAPLG00000003759	BMS1	94	53.826	ENSCATG00000008695	-	97	53.213	Cercocebus_atys
ENSAPLG00000003759	BMS1	100	72.595	ENSCATG00000030625	-	98	72.170	Cercocebus_atys
ENSAPLG00000003759	BMS1	100	72.003	ENSCLAG00000002446	BMS1	96	71.451	Chinchilla_lanigera
ENSAPLG00000003759	BMS1	100	72.514	ENSCSAG00000011118	BMS1	95	72.544	Chlorocebus_sabaeus
ENSAPLG00000003759	BMS1	100	71.509	ENSCHOG00000011055	BMS1	95	71.647	Choloepus_hoffmanni
ENSAPLG00000003759	BMS1	99	81.592	ENSCPBG00000025581	BMS1	95	80.735	Chrysemys_picta_bellii
ENSAPLG00000003759	BMS1	78	61.634	ENSCING00000003181	-	91	61.634	Ciona_intestinalis
ENSAPLG00000003759	BMS1	63	61.111	ENSCSAVG00000004113	-	83	62.108	Ciona_savignyi
ENSAPLG00000003759	BMS1	100	72.698	ENSCANG00000011609	BMS1	95	72.253	Colobus_angolensis_palliatus
ENSAPLG00000003759	BMS1	99	72.372	ENSCGRG00001019461	Bms1	96	71.326	Cricetulus_griseus_chok1gshd
ENSAPLG00000003759	BMS1	99	72.372	ENSCGRG00000009016	Bms1	95	71.326	Cricetulus_griseus_crigri
ENSAPLG00000003759	BMS1	85	71.555	ENSCVAG00000008371	bms1	90	71.555	Cyprinodon_variegatus
ENSAPLG00000003759	BMS1	100	71.498	ENSDNOG00000015761	BMS1	96	71.692	Dasypus_novemcinctus
ENSAPLG00000003759	BMS1	100	72.514	ENSDORG00000002982	Bms1	95	72.316	Dipodomys_ordii
ENSAPLG00000003759	BMS1	79	60.000	FBgn0036686	CG7728	87	60.000	Drosophila_melanogaster
ENSAPLG00000003759	BMS1	90	74.107	ENSETEG00000009554	BMS1	74	74.107	Echinops_telfairi
ENSAPLG00000003759	BMS1	100	72.405	ENSEASG00005006894	BMS1	95	73.043	Equus_asinus_asinus
ENSAPLG00000003759	BMS1	100	73.167	ENSECAG00000001358	BMS1	95	72.955	Equus_caballus
ENSAPLG00000003759	BMS1	88	70.690	ENSELUG00000001756	bms1	98	62.745	Esox_lucius
ENSAPLG00000003759	BMS1	100	72.433	ENSFCAG00000011220	BMS1	95	72.859	Felis_catus
ENSAPLG00000003759	BMS1	100	84.817	ENSFALG00000006882	BMS1	95	85.703	Ficedula_albicollis
ENSAPLG00000003759	BMS1	100	71.025	ENSFDAG00000001422	BMS1	96	70.655	Fukomys_damarensis
ENSAPLG00000003759	BMS1	85	72.035	ENSFHEG00000003367	bms1	90	72.035	Fundulus_heteroclitus
ENSAPLG00000003759	BMS1	90	65.940	ENSGMOG00000000718	bms1	93	65.940	Gadus_morhua
ENSAPLG00000003759	BMS1	100	88.273	ENSGALG00000002624	BMS1	95	88.344	Gallus_gallus
ENSAPLG00000003759	BMS1	99	60.526	ENSGACG00000015334	bms1	89	68.293	Gasterosteus_aculeatus
ENSAPLG00000003759	BMS1	99	80.716	ENSGAGG00000003467	BMS1	96	79.233	Gopherus_agassizii
ENSAPLG00000003759	BMS1	86	71.303	ENSHBUG00000022628	bms1	90	70.547	Haplochromis_burtoni
ENSAPLG00000003759	BMS1	100	70.991	ENSHGLG00000000477	BMS1	96	70.864	Heterocephalus_glaber_female
ENSAPLG00000003759	BMS1	100	71.141	ENSHGLG00100002176	BMS1	96	70.489	Heterocephalus_glaber_male
ENSAPLG00000003759	BMS1	88	70.599	ENSHCOG00000017604	bms1	93	67.279	Hippocampus_comes
ENSAPLG00000003759	BMS1	97	76.093	ENSIPUG00000017855	bms1	90	76.081	Ictalurus_punctatus
ENSAPLG00000003759	BMS1	100	71.716	ENSSTOG00000015063	BMS1	96	72.186	Ictidomys_tridecemlineatus
ENSAPLG00000003759	BMS1	100	71.647	ENSJJAG00000017328	Bms1	96	72.253	Jaculus_jaculus
ENSAPLG00000003759	BMS1	59	66.855	ENSKMAG00000021982	bms1	90	67.052	Kryptolebias_marmoratus
ENSAPLG00000003759	BMS1	87	70.403	ENSLBEG00000028208	bms1	95	61.477	Labrus_bergylta
ENSAPLG00000003759	BMS1	99	64.218	ENSLACG00000001600	BMS1	96	64.094	Latimeria_chalumnae
ENSAPLG00000003759	BMS1	82	76.852	ENSLOCG00000012914	bms1	95	64.516	Lepisosteus_oculatus
ENSAPLG00000003759	BMS1	100	71.566	ENSLAFG00000006250	BMS1	96	70.612	Loxodonta_africana
ENSAPLG00000003759	BMS1	81	76.893	ENSMFAG00000037771	BMS1	93	75.941	Macaca_fascicularis
ENSAPLG00000003759	BMS1	94	62.027	ENSMMUG00000007426	-	99	60.918	Macaca_mulatta
ENSAPLG00000003759	BMS1	93	55.043	ENSMLEG00000029084	-	100	54.246	Mandrillus_leucophaeus
ENSAPLG00000003759	BMS1	86	70.775	ENSMZEG00005005663	bms1	90	70.547	Maylandia_zebra
ENSAPLG00000003759	BMS1	95	87.753	ENSMGAG00000001170	BMS1	95	88.487	Meleagris_gallopavo
ENSAPLG00000003759	BMS1	99	72.712	ENSMAUG00000002195	Bms1	96	71.590	Mesocricetus_auratus
ENSAPLG00000003759	BMS1	100	71.636	ENSMICG00000009977	BMS1	95	71.797	Microcebus_murinus
ENSAPLG00000003759	BMS1	99	72.209	ENSMOCG00000002038	Bms1	95	71.968	Microtus_ochrogaster
ENSAPLG00000003759	BMS1	85	70.141	ENSMMOG00000000977	bms1	91	69.611	Mola_mola
ENSAPLG00000003759	BMS1	100	74.343	ENSMODG00000001177	BMS1	95	73.651	Monodelphis_domestica
ENSAPLG00000003759	BMS1	90	69.123	ENSMALG00000009680	bms1	90	68.541	Monopterus_albus
ENSAPLG00000003759	BMS1	52	86.364	MGP_CAROLIEiJ_G0028785	-	64	85.330	Mus_caroli
ENSAPLG00000003759	BMS1	99	72.431	ENSMUSG00000030138	Bms1	96	71.832	Mus_musculus
ENSAPLG00000003759	BMS1	99	72.036	MGP_PahariEiJ_G0022539	Bms1	96	71.314	Mus_pahari
ENSAPLG00000003759	BMS1	99	72.186	MGP_SPRETEiJ_G0029816	Bms1	96	71.268	Mus_spretus
ENSAPLG00000003759	BMS1	100	72.962	ENSMPUG00000017276	BMS1	95	73.220	Mustela_putorius_furo
ENSAPLG00000003759	BMS1	100	72.873	ENSMLUG00000003260	BMS1	95	72.720	Myotis_lucifugus
ENSAPLG00000003759	BMS1	100	63.636	ENSNGAG00000015258	Bms1	87	72.549	Nannospalax_galili
ENSAPLG00000003759	BMS1	100	71.140	ENSNLEG00000015791	BMS1	99	70.364	Nomascus_leucogenys
ENSAPLG00000003759	BMS1	80	83.610	ENSOPRG00000005195	BMS1	77	83.610	Ochotona_princeps
ENSAPLG00000003759	BMS1	100	71.948	ENSODEG00000005554	BMS1	96	71.878	Octodon_degus
ENSAPLG00000003759	BMS1	88	71.378	ENSONIG00000007227	bms1	95	62.016	Oreochromis_niloticus
ENSAPLG00000003759	BMS1	99	73.058	ENSOANG00000000662	-	95	73.018	Ornithorhynchus_anatinus
ENSAPLG00000003759	BMS1	100	72.272	ENSOCUG00000005354	BMS1	95	72.325	Oryctolagus_cuniculus
ENSAPLG00000003759	BMS1	87	71.150	ENSORLG00000014655	bms1	90	70.848	Oryzias_latipes
ENSAPLG00000003759	BMS1	87	70.018	ENSORLG00020016246	bms1	95	61.712	Oryzias_latipes_hni
ENSAPLG00000003759	BMS1	87	70.018	ENSORLG00015014183	bms1	95	61.075	Oryzias_latipes_hsok
ENSAPLG00000003759	BMS1	87	72.085	ENSOMEG00000015042	bms1	95	63.089	Oryzias_melastigma
ENSAPLG00000003759	BMS1	100	72.119	ENSOGAG00000006511	BMS1	95	72.334	Otolemur_garnettii
ENSAPLG00000003759	BMS1	100	72.705	ENSOARG00000003900	BMS1	96	72.925	Ovis_aries
ENSAPLG00000003759	BMS1	100	68.790	ENSPPAG00000027837	BMS1	95	68.510	Pan_paniscus
ENSAPLG00000003759	BMS1	100	72.272	ENSPPRG00000001311	BMS1	95	72.698	Panthera_pardus
ENSAPLG00000003759	BMS1	100	72.433	ENSPTIG00000009652	BMS1	97	72.918	Panthera_tigris_altaica
ENSAPLG00000003759	BMS1	100	72.236	ENSPTRG00000002441	BMS1	99	69.270	Pan_troglodytes
ENSAPLG00000003759	BMS1	99	78.117	ENSPSIG00000006481	BMS1	95	79.742	Pelodiscus_sinensis
ENSAPLG00000003759	BMS1	99	65.291	ENSPEMG00000022467	Bms1	95	65.595	Peromyscus_maniculatus_bairdii
ENSAPLG00000003759	BMS1	90	86.047	ENSPCIG00000001339	BMS1	95	85.235	Phascolarctos_cinereus
ENSAPLG00000003759	BMS1	85	70.619	ENSPFOG00000015180	bms1	94	66.188	Poecilia_formosa
ENSAPLG00000003759	BMS1	84	70.745	ENSPMEG00000023176	bms1	90	67.110	Poecilia_mexicana
ENSAPLG00000003759	BMS1	84	70.745	ENSPREG00000002695	bms1	92	67.953	Poecilia_reticulata
ENSAPLG00000003759	BMS1	63	66.794	ENSPPYG00000002836	-	99	67.044	Pongo_abelii
ENSAPLG00000003759	BMS1	71	85.714	ENSPCAG00000014528	BMS1	60	85.714	Procavia_capensis
ENSAPLG00000003759	BMS1	95	69.353	ENSPCOG00000023834	-	95	69.891	Propithecus_coquereli
ENSAPLG00000003759	BMS1	100	70.864	ENSPVAG00000000725	BMS1	95	71.199	Pteropus_vampyrus
ENSAPLG00000003759	BMS1	86	70.671	ENSPNYG00000018866	bms1	95	61.657	Pundamilia_nyererei
ENSAPLG00000003759	BMS1	85	70.311	ENSRNOG00000006576	Bms1	100	70.318	Rattus_norvegicus
ENSAPLG00000003759	BMS1	100	70.897	ENSRROG00000040101	BMS1	99	70.383	Rhinopithecus_roxellana
ENSAPLG00000003759	BMS1	70	47.273	YPL217C	-	80	47.045	Saccharomyces_cerevisiae
ENSAPLG00000003759	BMS1	100	72.419	ENSSBOG00000035778	BMS1	95	72.574	Saimiri_boliviensis_boliviensis
ENSAPLG00000003759	BMS1	100	72.367	ENSSHAG00000005062	BMS1	95	71.975	Sarcophilus_harrisii
ENSAPLG00000003759	BMS1	73	60.773	ENSSARG00000014407	BMS1	100	60.483	Sorex_araneus
ENSAPLG00000003759	BMS1	99	76.490	ENSSPUG00000014454	BMS1	95	77.152	Sphenodon_punctatus
ENSAPLG00000003759	BMS1	100	72.764	ENSSSCG00000010198	BMS1	97	73.039	Sus_scrofa
ENSAPLG00000003759	BMS1	99	86.193	ENSTGUG00000006302	-	95	85.839	Taeniopygia_guttata
ENSAPLG00000003759	BMS1	86	65.708	ENSTRUG00000008028	bms1	95	62.876	Takifugu_rubripes
ENSAPLG00000003759	BMS1	94	66.437	ENSTNIG00000006216	bms1	84	66.903	Tetraodon_nigroviridis
ENSAPLG00000003759	BMS1	59	78.261	ENSTBEG00000001673	-	59	78.317	Tupaia_belangeri
ENSAPLG00000003759	BMS1	100	70.816	ENSTTRG00000007983	BMS1	89	85.575	Tursiops_truncatus
ENSAPLG00000003759	BMS1	100	72.742	ENSUAMG00000023996	BMS1	95	72.683	Ursus_americanus
ENSAPLG00000003759	BMS1	100	72.661	ENSUMAG00000016523	BMS1	95	72.866	Ursus_maritimus
ENSAPLG00000003759	BMS1	88	66.971	ENSVPAG00000007477	BMS1	88	86.260	Vicugna_pacos
ENSAPLG00000003759	BMS1	100	72.838	ENSVVUG00000021305	BMS1	95	72.397	Vulpes_vulpes
ENSAPLG00000003759	BMS1	99	66.018	ENSXETG00000008158	bms1	95	66.316	Xenopus_tropicalis
ENSAPLG00000003759	BMS1	85	69.381	ENSXCOG00000000506	bms1	96	76.773	Xiphophorus_couchianus
ENSAPLG00000003759	BMS1	84	70.745	ENSXMAG00000014236	bms1	91	70.567	Xiphophorus_maculatus