EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000003874 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H12B
Alias: -
Full Name: zinc finger CCCH-type containing 12B
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 8388 bases
Position: chrKB743210.1:37867-46254
Accession: 101799979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003367	RNase_Zc3h12a	PF11977.8	4.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000003967	ZC3H12B-201	2870	XM_005020894	ENSAPLP00000003367	293 (aa)	XP_005020951	U3I7Z6

Gene Model

Click here to download ENSAPLG00000003874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000003874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000003874	ZC3H12B	99	70.890	ENSAPLG00000007281	ZC3H12A	69	70.890
ENSAPLG00000003874	ZC3H12B	99	63.574	ENSAPLG00000008379	ZC3H12D	90	63.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000003874	ZC3H12B	99	72.638	ENSACIG00000005689	-	73	69.697	Amphilophus_citrinellus
ENSAPLG00000003874	ZC3H12B	78	87.719	ENSCSAG00000011955	-	67	87.719	Chlorocebus_sabaeus
ENSAPLG00000003874	ZC3H12B	100	90.785	ENSECAG00000020993	ZC3H12B	67	87.826	Equus_caballus
ENSAPLG00000003874	ZC3H12B	98	98.951	ENSFALG00000004293	ZC3H12B	70	98.951	Ficedula_albicollis
ENSAPLG00000003874	ZC3H12B	99	74.570	ENSFHEG00000014717	-	60	70.996	Fundulus_heteroclitus
ENSAPLG00000003874	ZC3H12B	99	74.744	ENSHBUG00000003376	-	91	57.616	Haplochromis_burtoni
ENSAPLG00000003874	ZC3H12B	99	74.828	ENSHCOG00000017425	-	76	61.184	Hippocampus_comes
ENSAPLG00000003874	ZC3H12B	98	74.828	ENSMALG00000016807	-	85	56.757	Monopterus_albus
ENSAPLG00000003874	ZC3H12B	100	90.102	ENSMUSG00000035045	Zc3h12b	66	97.143	Mus_musculus
ENSAPLG00000003874	ZC3H12B	99	73.401	ENSORLG00000009188	-	54	73.737	Oryzias_latipes
ENSAPLG00000003874	ZC3H12B	99	73.401	ENSORLG00020019033	-	82	69.397	Oryzias_latipes_hni
ENSAPLG00000003874	ZC3H12B	99	73.064	ENSORLG00015020619	-	87	68.966	Oryzias_latipes_hsok
ENSAPLG00000003874	ZC3H12B	77	70.259	ENSPLAG00000011687	-	76	71.983	Poecilia_latipinna
ENSAPLG00000003874	ZC3H12B	78	74.123	ENSPNYG00000015874	-	79	74.123	Pundamilia_nyererei
ENSAPLG00000003874	ZC3H12B	99	75.517	ENSPNYG00000007151	-	93	54.321	Pundamilia_nyererei
ENSAPLG00000003874	ZC3H12B	100	89.761	ENSRNOG00000011508	Zc3h12b	68	87.281	Rattus_norvegicus
ENSAPLG00000003874	ZC3H12B	100	87.713	ENSSDUG00000014078	zc3h12b	84	85.088	Seriola_dumerili
ENSAPLG00000003874	ZC3H12B	99	74.074	ENSTRUG00000015402	-	59	75.421	Takifugu_rubripes
ENSAPLG00000003874	ZC3H12B	99	75.517	ENSXCOG00000007996	-	83	71.366	Xiphophorus_couchianus