EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000003934 (Gene tree)
Gene ID: 101794824
Gene Symbol: PATZ1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 16252 bases
Position: chrKB744033.1:899394-915645
Accession: 101794824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003428	zf-C2H2	PF00096.26	1.8e-28	1	5
ENSAPLP00000003428	zf-C2H2	PF00096.26	1.8e-28	2	5
ENSAPLP00000003428	zf-C2H2	PF00096.26	1.8e-28	3	5
ENSAPLP00000003428	zf-C2H2	PF00096.26	1.8e-28	4	5
ENSAPLP00000003428	zf-C2H2	PF00096.26	1.8e-28	5	5
ENSAPLP00000003428	zf-met	PF12874.7	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004029	PATZ1-201	1734	XM_005026673	ENSAPLP00000003428	577 (aa)	XP_005026730	U3I857

Gene Model

Click here to download ENSAPLG00000003934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000003934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000003934	PATZ1	58	30.822	ENSAPLG00000002277	ZNF319	85	30.822
ENSAPLG00000003934	PATZ1	65	30.500	ENSAPLG00000015467	ZBTB48	76	30.500
ENSAPLG00000003934	PATZ1	64	33.333	ENSAPLG00000012660	-	82	33.333
ENSAPLG00000003934	PATZ1	60	33.193	ENSAPLG00000004595	ZNF672	96	33.193
ENSAPLG00000003934	PATZ1	71	37.615	ENSAPLG00000011548	ZBTB14	75	38.532
ENSAPLG00000003934	PATZ1	60	38.393	ENSAPLG00000014682	ZNF236	50	38.393
ENSAPLG00000003934	PATZ1	70	35.398	ENSAPLG00000014760	-	96	35.398
ENSAPLG00000003934	PATZ1	61	40.000	ENSAPLG00000007481	MYNN	50	40.000
ENSAPLG00000003934	PATZ1	63	31.128	ENSAPLG00000013828	PRDM5	71	31.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000003934	PATZ1	99	91.096	ENSG00000100105	PATZ1	85	91.267	Homo_sapiens
ENSAPLG00000003934	PATZ1	99	53.623	ENSAPOG00000018447	patz1	90	59.874	Acanthochromis_polyacanthus
ENSAPLG00000003934	PATZ1	99	90.925	ENSAMEG00000007074	PATZ1	85	91.952	Ailuropoda_melanoleuca
ENSAPLG00000003934	PATZ1	99	57.095	ENSACIG00000016779	patz1	88	57.095	Amphilophus_citrinellus
ENSAPLG00000003934	PATZ1	99	58.101	ENSAPEG00000013354	patz1	88	58.101	Amphiprion_percula
ENSAPLG00000003934	PATZ1	99	61.853	ENSATEG00000011260	patz1	88	58.000	Anabas_testudineus
ENSAPLG00000003934	PATZ1	99	91.096	ENSANAG00000029603	PATZ1	85	91.267	Aotus_nancymaae
ENSAPLG00000003934	PATZ1	96	61.449	ENSAMXG00000002273	patz1	87	51.938	Astyanax_mexicanus
ENSAPLG00000003934	PATZ1	99	90.753	ENSBTAG00000005478	PATZ1	85	91.781	Bos_taurus
ENSAPLG00000003934	PATZ1	99	91.096	ENSCJAG00000010978	PATZ1	85	91.267	Callithrix_jacchus
ENSAPLG00000003934	PATZ1	99	90.925	ENSCAFG00000013087	PATZ1	85	91.952	Canis_familiaris
ENSAPLG00000003934	PATZ1	99	90.411	ENSCHIG00000020203	PATZ1	85	91.438	Capra_hircus
ENSAPLG00000003934	PATZ1	99	91.096	ENSTSYG00000033183	PATZ1	85	91.267	Carlito_syrichta
ENSAPLG00000003934	PATZ1	99	91.096	ENSCCAG00000028772	PATZ1	85	91.267	Cebus_capucinus
ENSAPLG00000003934	PATZ1	99	91.267	ENSCATG00000006101	PATZ1	85	91.438	Cercocebus_atys
ENSAPLG00000003934	PATZ1	99	97.064	ENSCPBG00000011277	PATZ1	85	97.064	Chrysemys_picta_bellii
ENSAPLG00000003934	PATZ1	99	91.267	ENSCANG00000024972	PATZ1	85	91.438	Colobus_angolensis_palliatus
ENSAPLG00000003934	PATZ1	99	89.041	ENSCGRG00001004071	Patz1	85	89.212	Cricetulus_griseus_chok1gshd
ENSAPLG00000003934	PATZ1	99	90.753	ENSCGRG00000004814	Patz1	91	90.925	Cricetulus_griseus_crigri
ENSAPLG00000003934	PATZ1	99	55.263	ENSCSEG00000001385	patz1	88	55.032	Cynoglossus_semilaevis
ENSAPLG00000003934	PATZ1	99	57.166	ENSCVAG00000007684	patz1	88	57.496	Cyprinodon_variegatus
ENSAPLG00000003934	PATZ1	99	54.817	ENSDARG00000076584	patz1	87	54.817	Danio_rerio
ENSAPLG00000003934	PATZ1	88	89.729	ENSDNOG00000003183	PATZ1	83	90.891	Dasypus_novemcinctus
ENSAPLG00000003934	PATZ1	99	90.753	ENSDORG00000023834	Patz1	85	91.781	Dipodomys_ordii
ENSAPLG00000003934	PATZ1	99	91.438	ENSECAG00000025030	PATZ1	85	91.610	Equus_caballus
ENSAPLG00000003934	PATZ1	99	53.281	ENSELUG00000002333	patz1	90	59.252	Esox_lucius
ENSAPLG00000003934	PATZ1	99	90.925	ENSFCAG00000030253	PATZ1	85	91.952	Felis_catus
ENSAPLG00000003934	PATZ1	99	98.273	ENSFALG00000007450	PATZ1	99	98.273	Ficedula_albicollis
ENSAPLG00000003934	PATZ1	99	86.496	ENSFDAG00000005614	PATZ1	88	87.692	Fukomys_damarensis
ENSAPLG00000003934	PATZ1	99	56.840	ENSFHEG00000014755	patz1	88	56.840	Fundulus_heteroclitus
ENSAPLG00000003934	PATZ1	98	54.723	ENSGMOG00000001062	patz1	87	54.886	Gadus_morhua
ENSAPLG00000003934	PATZ1	99	98.273	ENSGALG00000006934	PATZ1	84	98.273	Gallus_gallus
ENSAPLG00000003934	PATZ1	99	53.710	ENSGAFG00000010053	patz1	88	53.226	Gambusia_affinis
ENSAPLG00000003934	PATZ1	99	97.059	ENSGAGG00000003214	PATZ1	100	97.059	Gopherus_agassizii
ENSAPLG00000003934	PATZ1	99	91.267	ENSGGOG00000017171	PATZ1	85	91.438	Gorilla_gorilla
ENSAPLG00000003934	PATZ1	99	53.028	ENSHCOG00000017644	patz1	89	52.135	Hippocampus_comes
ENSAPLG00000003934	PATZ1	99	53.257	ENSIPUG00000017653	patz1	87	53.257	Ictalurus_punctatus
ENSAPLG00000003934	PATZ1	99	90.753	ENSSTOG00000020707	PATZ1	85	91.781	Ictidomys_tridecemlineatus
ENSAPLG00000003934	PATZ1	99	89.573	ENSJJAG00000015259	Patz1	85	89.915	Jaculus_jaculus
ENSAPLG00000003934	PATZ1	99	56.449	ENSKMAG00000008157	patz1	87	55.684	Kryptolebias_marmoratus
ENSAPLG00000003934	PATZ1	99	90.753	ENSLAFG00000002317	PATZ1	86	91.781	Loxodonta_africana
ENSAPLG00000003934	PATZ1	99	91.267	ENSMFAG00000040968	PATZ1	85	91.438	Macaca_fascicularis
ENSAPLG00000003934	PATZ1	99	91.267	ENSMNEG00000037588	PATZ1	85	91.438	Macaca_nemestrina
ENSAPLG00000003934	PATZ1	99	91.267	ENSMLEG00000030938	PATZ1	85	91.438	Mandrillus_leucophaeus
ENSAPLG00000003934	PATZ1	99	56.735	ENSMAMG00000023652	patz1	89	56.735	Mastacembelus_armatus
ENSAPLG00000003934	PATZ1	99	95.312	ENSMGAG00000008439	PATZ1	99	95.312	Meleagris_gallopavo
ENSAPLG00000003934	PATZ1	99	90.925	ENSMAUG00000004129	Patz1	85	91.096	Mesocricetus_auratus
ENSAPLG00000003934	PATZ1	99	91.438	ENSMICG00000005430	PATZ1	85	91.610	Microcebus_murinus
ENSAPLG00000003934	PATZ1	99	90.925	ENSMOCG00000014488	Patz1	85	91.096	Microtus_ochrogaster
ENSAPLG00000003934	PATZ1	77	55.286	ENSMMOG00000021679	patz1	57	55.286	Mola_mola
ENSAPLG00000003934	PATZ1	99	56.856	ENSMALG00000021172	patz1	88	56.856	Monopterus_albus
ENSAPLG00000003934	PATZ1	99	90.582	MGP_CAROLIEiJ_G0016007	Patz1	85	90.753	Mus_caroli
ENSAPLG00000003934	PATZ1	99	90.753	ENSMUSG00000020453	Patz1	85	90.925	Mus_musculus
ENSAPLG00000003934	PATZ1	99	90.753	MGP_PahariEiJ_G0016884	Patz1	85	90.925	Mus_pahari
ENSAPLG00000003934	PATZ1	99	90.753	MGP_SPRETEiJ_G0016846	Patz1	85	90.925	Mus_spretus
ENSAPLG00000003934	PATZ1	99	90.753	ENSMLUG00000009942	PATZ1	85	91.781	Myotis_lucifugus
ENSAPLG00000003934	PATZ1	99	91.096	ENSNGAG00000010268	Patz1	85	91.267	Nannospalax_galili
ENSAPLG00000003934	PATZ1	99	58.292	ENSNBRG00000016032	patz1	88	58.292	Neolamprologus_brichardi
ENSAPLG00000003934	PATZ1	81	92.903	ENSMEUG00000016293	PATZ1	100	92.903	Notamacropus_eugenii
ENSAPLG00000003934	PATZ1	99	91.438	ENSODEG00000003589	PATZ1	85	91.438	Octodon_degus
ENSAPLG00000003934	PATZ1	99	54.400	ENSONIG00000004248	patz1	88	54.400	Oreochromis_niloticus
ENSAPLG00000003934	PATZ1	99	91.966	ENSOANG00000014654	PATZ1	85	92.137	Ornithorhynchus_anatinus
ENSAPLG00000003934	PATZ1	99	55.416	ENSORLG00020010937	patz1	88	55.416	Oryzias_latipes_hni
ENSAPLG00000003934	PATZ1	99	55.346	ENSORLG00015007396	patz1	88	55.346	Oryzias_latipes_hsok
ENSAPLG00000003934	PATZ1	99	53.074	ENSOMEG00000006636	patz1	87	53.074	Oryzias_melastigma
ENSAPLG00000003934	PATZ1	99	91.438	ENSOGAG00000027905	PATZ1	85	91.610	Otolemur_garnettii
ENSAPLG00000003934	PATZ1	99	91.267	ENSPPAG00000033227	PATZ1	85	91.438	Pan_paniscus
ENSAPLG00000003934	PATZ1	99	90.925	ENSPPRG00000001573	PATZ1	85	91.952	Panthera_pardus
ENSAPLG00000003934	PATZ1	99	90.925	ENSPTIG00000007937	PATZ1	89	91.952	Panthera_tigris_altaica
ENSAPLG00000003934	PATZ1	99	91.267	ENSPTRG00000014268	PATZ1	85	91.438	Pan_troglodytes
ENSAPLG00000003934	PATZ1	99	91.267	ENSPANG00000006821	PATZ1	85	91.438	Papio_anubis
ENSAPLG00000003934	PATZ1	99	62.397	ENSPKIG00000019584	patz1	88	62.562	Paramormyrops_kingsleyae
ENSAPLG00000003934	PATZ1	71	89.706	ENSPSIG00000016553	-	91	89.706	Pelodiscus_sinensis
ENSAPLG00000003934	PATZ1	69	98.485	ENSPSIG00000011562	-	100	98.485	Pelodiscus_sinensis
ENSAPLG00000003934	PATZ1	99	57.119	ENSPMGG00000010196	patz1	88	57.119	Periophthalmus_magnuspinnatus
ENSAPLG00000003934	PATZ1	99	91.096	ENSPEMG00000005321	Patz1	85	91.096	Peromyscus_maniculatus_bairdii
ENSAPLG00000003934	PATZ1	99	57.213	ENSPLAG00000010425	patz1	100	56.814	Poecilia_latipinna
ENSAPLG00000003934	PATZ1	99	53.784	ENSPMEG00000000255	patz1	88	53.387	Poecilia_mexicana
ENSAPLG00000003934	PATZ1	99	56.913	ENSPREG00000002440	patz1	88	56.522	Poecilia_reticulata
ENSAPLG00000003934	PATZ1	99	91.096	ENSPPYG00000011732	PATZ1	85	91.267	Pongo_abelii
ENSAPLG00000003934	PATZ1	99	91.267	ENSPCOG00000019729	PATZ1	85	91.438	Propithecus_coquereli
ENSAPLG00000003934	PATZ1	99	90.925	ENSPVAG00000001749	PATZ1	85	91.952	Pteropus_vampyrus
ENSAPLG00000003934	PATZ1	99	59.247	ENSPNYG00000013542	patz1	88	59.247	Pundamilia_nyererei
ENSAPLG00000003934	PATZ1	99	58.007	ENSPNAG00000017222	patz1	99	58.007	Pygocentrus_nattereri
ENSAPLG00000003934	PATZ1	99	91.267	ENSRBIG00000044231	PATZ1	85	91.438	Rhinopithecus_bieti
ENSAPLG00000003934	PATZ1	99	91.267	ENSRROG00000037155	PATZ1	85	91.438	Rhinopithecus_roxellana
ENSAPLG00000003934	PATZ1	99	91.096	ENSSBOG00000003894	PATZ1	85	91.267	Saimiri_boliviensis_boliviensis
ENSAPLG00000003934	PATZ1	68	89.474	ENSSFOG00015013244	patz1	67	89.474	Scleropages_formosus
ENSAPLG00000003934	PATZ1	99	95.704	ENSSPUG00000015298	PATZ1	83	95.704	Sphenodon_punctatus
ENSAPLG00000003934	PATZ1	99	90.395	ENSSSCG00000010027	PATZ1	100	91.424	Sus_scrofa
ENSAPLG00000003934	PATZ1	99	57.668	ENSTRUG00000015366	patz1	88	57.668	Takifugu_rubripes
ENSAPLG00000003934	PATZ1	99	90.925	ENSTTRG00000010279	PATZ1	85	91.952	Tursiops_truncatus
ENSAPLG00000003934	PATZ1	99	83.562	ENSUAMG00000015014	PATZ1	84	84.589	Ursus_americanus
ENSAPLG00000003934	PATZ1	99	74.957	ENSXETG00000004190	patz1	88	74.957	Xenopus_tropicalis
ENSAPLG00000003934	PATZ1	99	54.516	ENSXMAG00000015531	patz1	88	54.032	Xiphophorus_maculatus