EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000004055 (Gene tree)
Gene ID: -
Gene Symbol: FAM172A
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 237356 bases
Position: chrKB742474.1:27060-264415
Accession: 101796535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003578	Arb2	PF09757.9	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004185	FAM172A-203	648	-	ENSAPLP00000003583	163 (aa)	-	U3I8L2
ENSAPLT00000004180	FAM172A-201	1248	XM_005010336	ENSAPLP00000003578	416 (aa)	-	U3I8K7
ENSAPLT00000004181	FAM172A-202	1101	-	ENSAPLP00000003579	367 (aa)	-	U3I8K8

Gene Model

Click here to download ENSAPLG00000004055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000004055	FAM172A	55	39.574	ENSAPLG00000011555	-	99	39.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000004055	FAM172A	97	88.366	ENSG00000113391	FAM172A	100	89.873	Homo_sapiens
ENSAPLG00000004055	FAM172A	91	88.889	ENSACAG00000013305	FAM172A	98	88.889	Anolis_carolinensis
ENSAPLG00000004055	FAM172A	89	81.081	ENSANAG00000035869	FAM172A	95	80.105	Aotus_nancymaae
ENSAPLG00000004055	FAM172A	97	87.871	ENSBTAG00000050195	FAM172A	100	86.779	Bos_taurus
ENSAPLG00000004055	FAM172A	97	88.119	ENSCJAG00000010444	FAM172A	100	87.019	Callithrix_jacchus
ENSAPLG00000004055	FAM172A	86	89.106	ENSCAFG00000008064	FAM172A	99	87.838	Canis_familiaris
ENSAPLG00000004055	FAM172A	97	87.624	ENSCAFG00020006210	FAM172A	100	86.538	Canis_lupus_dingo
ENSAPLG00000004055	FAM172A	97	87.871	ENSCHIG00000008440	FAM172A	100	86.779	Capra_hircus
ENSAPLG00000004055	FAM172A	64	88.346	ENSTSYG00000006286	FAM172A	85	88.346	Carlito_syrichta
ENSAPLG00000004055	FAM172A	53	85.321	ENSCAPG00000014103	-	100	85.321	Cavia_aperea
ENSAPLG00000004055	FAM172A	97	87.624	ENSCCAG00000023116	FAM172A	100	87.568	Cebus_capucinus
ENSAPLG00000004055	FAM172A	100	79.808	ENSCLAG00000005472	FAM172A	100	89.873	Chinchilla_lanigera
ENSAPLG00000004055	FAM172A	87	43.164	ENSCPBG00000004402	-	97	43.164	Chrysemys_picta_bellii
ENSAPLG00000004055	FAM172A	65	87.778	ENSCANG00000040412	FAM172A	92	87.778	Colobus_angolensis_palliatus
ENSAPLG00000004055	FAM172A	97	87.376	ENSDNOG00000004689	FAM172A	100	86.298	Dasypus_novemcinctus
ENSAPLG00000004055	FAM172A	65	87.778	ENSDORG00000013558	Fam172a	88	87.778	Dipodomys_ordii
ENSAPLG00000004055	FAM172A	85	39.946	ENSEBUG00000016097	-	70	39.946	Eptatretus_burgeri
ENSAPLG00000004055	FAM172A	97	85.891	ENSECAG00000018274	FAM172A	100	84.856	Equus_caballus
ENSAPLG00000004055	FAM172A	96	76.750	ENSEEUG00000002887	FAM172A	100	75.240	Erinaceus_europaeus
ENSAPLG00000004055	FAM172A	99	66.587	ENSELUG00000017647	fam172a	99	66.587	Esox_lucius
ENSAPLG00000004055	FAM172A	97	87.871	ENSFCAG00000025443	FAM172A	100	86.779	Felis_catus
ENSAPLG00000004055	FAM172A	81	45.266	ENSFALG00000006501	-	94	45.266	Ficedula_albicollis
ENSAPLG00000004055	FAM172A	89	91.328	ENSFALG00000009072	FAM172A	99	91.328	Ficedula_albicollis
ENSAPLG00000004055	FAM172A	100	93.990	ENSGALG00000014661	FAM172A	100	93.990	Gallus_gallus
ENSAPLG00000004055	FAM172A	100	92.308	ENSGAGG00000003839	FAM172A	100	92.308	Gopherus_agassizii
ENSAPLG00000004055	FAM172A	86	43.681	ENSGAGG00000022828	-	96	43.681	Gopherus_agassizii
ENSAPLG00000004055	FAM172A	97	87.871	ENSGGOG00000010296	FAM172A	100	86.779	Gorilla_gorilla
ENSAPLG00000004055	FAM172A	97	87.129	ENSHGLG00000011178	FAM172A	100	91.139	Heterocephalus_glaber_female
ENSAPLG00000004055	FAM172A	86	89.076	ENSHGLG00100013340	FAM172A	100	91.139	Heterocephalus_glaber_male
ENSAPLG00000004055	FAM172A	97	88.119	ENSSTOG00000009918	FAM172A	100	87.019	Ictidomys_tridecemlineatus
ENSAPLG00000004055	FAM172A	88	47.139	ENSLACG00000001532	si:ch73-41e3.7	96	47.139	Latimeria_chalumnae
ENSAPLG00000004055	FAM172A	98	77.129	ENSLOCG00000001629	fam172a	98	77.859	Lepisosteus_oculatus
ENSAPLG00000004055	FAM172A	65	87.778	ENSMFAG00000001171	FAM172A	92	87.778	Macaca_fascicularis
ENSAPLG00000004055	FAM172A	92	88.451	ENSMNEG00000039938	FAM172A	92	87.778	Macaca_nemestrina
ENSAPLG00000004055	FAM172A	100	87.019	ENSMICG00000030403	FAM172A	100	87.019	Microcebus_murinus
ENSAPLG00000004055	FAM172A	89	85.946	ENSMOCG00000003613	Fam172a	100	85.946	Microtus_ochrogaster
ENSAPLG00000004055	FAM172A	100	86.298	ENSMODG00000020131	FAM172A	100	86.298	Monodelphis_domestica
ENSAPLG00000004055	FAM172A	75	84.810	MGP_PahariEiJ_G0015818	Fam172a	100	84.810	Mus_pahari
ENSAPLG00000004055	FAM172A	89	88.378	ENSNGAG00000019570	Fam172a	100	88.378	Nannospalax_galili
ENSAPLG00000004055	FAM172A	65	87.778	ENSNLEG00000013903	FAM172A	89	87.778	Nomascus_leucogenys
ENSAPLG00000004055	FAM172A	89	87.297	ENSOANG00000011068	FAM172A	99	87.297	Ornithorhynchus_anatinus
ENSAPLG00000004055	FAM172A	94	87.277	ENSOCUG00000007299	FAM172A	96	86.173	Oryctolagus_cuniculus
ENSAPLG00000004055	FAM172A	97	87.129	ENSOGAG00000015189	FAM172A	100	86.058	Otolemur_garnettii
ENSAPLG00000004055	FAM172A	89	86.253	ENSOARG00000016711	FAM172A	87	85.117	Ovis_aries
ENSAPLG00000004055	FAM172A	65	88.148	ENSPPAG00000030542	FAM172A	92	88.148	Pan_paniscus
ENSAPLG00000004055	FAM172A	97	87.871	ENSPPRG00000006653	FAM172A	100	86.779	Panthera_pardus
ENSAPLG00000004055	FAM172A	97	87.871	ENSPTIG00000012681	FAM172A	100	86.779	Panthera_tigris_altaica
ENSAPLG00000004055	FAM172A	65	88.148	ENSPTRG00000017074	FAM172A	92	88.148	Pan_troglodytes
ENSAPLG00000004055	FAM172A	65	87.778	ENSPANG00000011687	FAM172A	92	87.778	Papio_anubis
ENSAPLG00000004055	FAM172A	95	73.485	ENSPKIG00000012314	fam172a	98	78.947	Paramormyrops_kingsleyae
ENSAPLG00000004055	FAM172A	100	84.615	ENSPEMG00000009604	-	100	87.342	Peromyscus_maniculatus_bairdii
ENSAPLG00000004055	FAM172A	100	86.298	ENSPCIG00000028612	FAM172A	100	86.298	Phascolarctos_cinereus
ENSAPLG00000004055	FAM172A	55	85.590	ENSPCOG00000024072	FAM172A	93	85.590	Propithecus_coquereli
ENSAPLG00000004055	FAM172A	65	85.130	ENSRNOG00000013844	Fam172a	99	85.130	Rattus_norvegicus
ENSAPLG00000004055	FAM172A	65	87.778	ENSRROG00000023807	FAM172A	92	87.778	Rhinopithecus_roxellana
ENSAPLG00000004055	FAM172A	97	87.871	ENSSBOG00000019860	FAM172A	100	86.779	Saimiri_boliviensis_boliviensis
ENSAPLG00000004055	FAM172A	100	86.058	ENSSHAG00000013743	FAM172A	100	86.058	Sarcophilus_harrisii
ENSAPLG00000004055	FAM172A	100	88.702	ENSSPUG00000008161	FAM172A	100	88.702	Sphenodon_punctatus
ENSAPLG00000004055	FAM172A	100	86.538	ENSSSCG00000027608	FAM172A	100	87.568	Sus_scrofa
ENSAPLG00000004055	FAM172A	80	47.024	ENSTGUG00000013623	-	100	47.024	Taeniopygia_guttata
ENSAPLG00000004055	FAM172A	91	92.632	ENSTGUG00000000715	FAM172A	100	92.632	Taeniopygia_guttata
ENSAPLG00000004055	FAM172A	79	57.186	ENSTNIG00000009902	fam172a	100	59.226	Tetraodon_nigroviridis
ENSAPLG00000004055	FAM172A	100	84.135	ENSTTRG00000001521	FAM172A	100	84.135	Tursiops_truncatus
ENSAPLG00000004055	FAM172A	97	87.871	ENSUMAG00000005442	FAM172A	100	86.779	Ursus_maritimus
ENSAPLG00000004055	FAM172A	97	87.624	ENSVVUG00000022112	FAM172A	100	86.538	Vulpes_vulpes
ENSAPLG00000004055	FAM172A	100	80.144	ENSXETG00000011592	fam172a	99	80.144	Xenopus_tropicalis
ENSAPLG00000004055	FAM172A	92	43.081	ENSXETG00000033027	-	100	43.081	Xenopus_tropicalis