EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000004190 (Gene tree)
Gene ID: -
Gene Symbol: RBM17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 12261 bases
Position: chrKB743833.1:934506-946766
Accession: 101791010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003703	RRM_1	PF00076.22	4.8e-05	1	1
ENSAPLP00000003703	G-patch	PF01585.23	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004309	RBM17-201	1383	XM_005025773	ENSAPLP00000003703	402 (aa)	XP_005025830	R0L699

Gene Model

Click here to download ENSAPLG00000004190's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000004190	RBM17	100	95.771	ENSG00000134453	RBM17	100	95.771	Homo_sapiens
ENSAPLG00000004190	RBM17	99	83.623	ENSAPOG00000007101	rbm17	99	83.623	Acanthochromis_polyacanthus
ENSAPLG00000004190	RBM17	100	95.522	ENSAMEG00000002107	RBM17	100	95.522	Ailuropoda_melanoleuca
ENSAPLG00000004190	RBM17	100	80.147	ENSACIG00000006251	rbm17	100	80.147	Amphilophus_citrinellus
ENSAPLG00000004190	RBM17	100	83.538	ENSAOCG00000014892	rbm17	100	83.538	Amphiprion_ocellaris
ENSAPLG00000004190	RBM17	100	83.538	ENSAPEG00000022779	rbm17	100	83.538	Amphiprion_percula
ENSAPLG00000004190	RBM17	100	80.189	ENSATEG00000004406	rbm17	100	80.189	Anabas_testudineus
ENSAPLG00000004190	RBM17	89	92.162	ENSACAG00000005418	RBM17	99	92.162	Anolis_carolinensis
ENSAPLG00000004190	RBM17	100	95.771	ENSANAG00000030127	RBM17	100	95.771	Aotus_nancymaae
ENSAPLG00000004190	RBM17	100	81.638	ENSANAG00000019330	-	95	93.103	Aotus_nancymaae
ENSAPLG00000004190	RBM17	100	80.000	ENSACLG00000003928	rbm17	100	80.000	Astatotilapia_calliptera
ENSAPLG00000004190	RBM17	100	77.882	ENSAMXG00000005853	rbm17	100	80.471	Astyanax_mexicanus
ENSAPLG00000004190	RBM17	100	94.527	ENSBTAG00000011094	-	100	94.527	Bos_taurus
ENSAPLG00000004190	RBM17	100	96.020	ENSBTAG00000021951	RBM17	100	96.020	Bos_taurus
ENSAPLG00000004190	RBM17	73	34.219	WBGene00010233	F58B3.7	91	32.391	Caenorhabditis_elegans
ENSAPLG00000004190	RBM17	100	95.771	ENSCJAG00000020573	RBM17	100	95.771	Callithrix_jacchus
ENSAPLG00000004190	RBM17	100	95.522	ENSCAFG00000005206	RBM17	100	95.522	Canis_familiaris
ENSAPLG00000004190	RBM17	100	91.294	ENSCAFG00020005420	RBM17	100	91.294	Canis_lupus_dingo
ENSAPLG00000004190	RBM17	100	93.284	ENSCHIG00000019921	-	100	93.284	Capra_hircus
ENSAPLG00000004190	RBM17	100	96.020	ENSCHIG00000023204	-	100	96.020	Capra_hircus
ENSAPLG00000004190	RBM17	100	94.568	ENSTSYG00000001165	RBM17	99	97.458	Carlito_syrichta
ENSAPLG00000004190	RBM17	96	73.316	ENSCAPG00000006275	RBM17	100	77.596	Cavia_aperea
ENSAPLG00000004190	RBM17	100	90.709	ENSCPOG00000005679	RBM17	100	90.709	Cavia_porcellus
ENSAPLG00000004190	RBM17	100	95.771	ENSCCAG00000018655	RBM17	100	95.771	Cebus_capucinus
ENSAPLG00000004190	RBM17	100	95.771	ENSCATG00000041566	RBM17	100	95.771	Cercocebus_atys
ENSAPLG00000004190	RBM17	100	94.815	ENSCLAG00000012195	RBM17	99	94.815	Chinchilla_lanigera
ENSAPLG00000004190	RBM17	100	95.771	ENSCSAG00000013564	RBM17	100	95.771	Chlorocebus_sabaeus
ENSAPLG00000004190	RBM17	92	76.819	ENSCHOG00000005131	RBM17	100	76.819	Choloepus_hoffmanni
ENSAPLG00000004190	RBM17	100	97.015	ENSCPBG00000019836	RBM17	100	97.015	Chrysemys_picta_bellii
ENSAPLG00000004190	RBM17	100	46.635	ENSCSAVG00000008782	-	100	45.060	Ciona_savignyi
ENSAPLG00000004190	RBM17	98	83.715	ENSCANG00000023715	-	100	83.715	Colobus_angolensis_palliatus
ENSAPLG00000004190	RBM17	100	95.522	ENSCANG00000030987	RBM17	100	95.522	Colobus_angolensis_palliatus
ENSAPLG00000004190	RBM17	100	73.333	ENSCGRG00001009256	-	100	71.358	Cricetulus_griseus_chok1gshd
ENSAPLG00000004190	RBM17	100	95.556	ENSCGRG00001013842	Rbm17	100	95.556	Cricetulus_griseus_chok1gshd
ENSAPLG00000004190	RBM17	100	95.556	ENSCGRG00000006907	Rbm17	100	95.556	Cricetulus_griseus_crigri
ENSAPLG00000004190	RBM17	100	79.115	ENSCSEG00000018164	rbm17	100	79.115	Cynoglossus_semilaevis
ENSAPLG00000004190	RBM17	100	74.568	ENSCVAG00000002476	rbm17	100	75.912	Cyprinodon_variegatus
ENSAPLG00000004190	RBM17	100	77.882	ENSDARG00000031346	rbm17	100	77.882	Danio_rerio
ENSAPLG00000004190	RBM17	100	95.771	ENSDNOG00000035920	RBM17	100	95.771	Dasypus_novemcinctus
ENSAPLG00000004190	RBM17	99	34.924	FBgn0086683	Spf45	99	35.036	Drosophila_melanogaster
ENSAPLG00000004190	RBM17	100	72.886	ENSETEG00000006642	RBM17	100	72.886	Echinops_telfairi
ENSAPLG00000004190	RBM17	63	70.732	ENSEBUG00000010253	rbm17	86	70.732	Eptatretus_burgeri
ENSAPLG00000004190	RBM17	100	90.148	ENSEASG00005019205	-	100	90.148	Equus_asinus_asinus
ENSAPLG00000004190	RBM17	92	92.183	ENSEASG00005009236	-	100	92.183	Equus_asinus_asinus
ENSAPLG00000004190	RBM17	100	79.851	ENSECAG00000008939	RBM17	100	82.090	Equus_caballus
ENSAPLG00000004190	RBM17	100	85.075	ENSECAG00000001379	-	100	85.075	Equus_caballus
ENSAPLG00000004190	RBM17	86	77.681	ENSEEUG00000013077	RBM17	100	77.681	Erinaceus_europaeus
ENSAPLG00000004190	RBM17	100	76.620	ENSELUG00000006440	rbm17	100	76.620	Esox_lucius
ENSAPLG00000004190	RBM17	100	95.522	ENSFCAG00000031988	RBM17	100	95.522	Felis_catus
ENSAPLG00000004190	RBM17	100	98.010	ENSFALG00000001790	RBM17	100	98.010	Ficedula_albicollis
ENSAPLG00000004190	RBM17	100	94.815	ENSFDAG00000007470	RBM17	100	94.815	Fukomys_damarensis
ENSAPLG00000004190	RBM17	100	78.870	ENSFHEG00000001266	rbm17	100	77.778	Fundulus_heteroclitus
ENSAPLG00000004190	RBM17	99	76.010	ENSGMOG00000008438	rbm17	100	76.010	Gadus_morhua
ENSAPLG00000004190	RBM17	100	99.254	ENSGALG00000006332	RBM17	100	99.254	Gallus_gallus
ENSAPLG00000004190	RBM17	100	80.590	ENSGAFG00000019879	rbm17	100	80.590	Gambusia_affinis
ENSAPLG00000004190	RBM17	99	81.773	ENSGACG00000019174	rbm17	99	81.773	Gasterosteus_aculeatus
ENSAPLG00000004190	RBM17	100	97.015	ENSGAGG00000019906	RBM17	100	97.015	Gopherus_agassizii
ENSAPLG00000004190	RBM17	100	84.521	ENSHBUG00000016624	rbm17	100	84.521	Haplochromis_burtoni
ENSAPLG00000004190	RBM17	100	94.815	ENSHGLG00000011580	RBM17	100	94.815	Heterocephalus_glaber_female
ENSAPLG00000004190	RBM17	100	94.815	ENSHGLG00100010460	RBM17	100	94.815	Heterocephalus_glaber_male
ENSAPLG00000004190	RBM17	100	74.074	ENSHGLG00100010556	-	100	72.346	Heterocephalus_glaber_male
ENSAPLG00000004190	RBM17	99	77.804	ENSHCOG00000010865	rbm17	100	77.804	Hippocampus_comes
ENSAPLG00000004190	RBM17	100	78.689	ENSIPUG00000007699	Rbm17	100	78.689	Ictalurus_punctatus
ENSAPLG00000004190	RBM17	100	95.309	ENSSTOG00000013591	RBM17	100	95.309	Ictidomys_tridecemlineatus
ENSAPLG00000004190	RBM17	100	71.144	ENSJJAG00000000993	-	100	67.822	Jaculus_jaculus
ENSAPLG00000004190	RBM17	100	95.556	ENSJJAG00000022886	Rbm17	100	95.556	Jaculus_jaculus
ENSAPLG00000004190	RBM17	100	79.361	ENSKMAG00000021400	rbm17	100	80.098	Kryptolebias_marmoratus
ENSAPLG00000004190	RBM17	100	82.064	ENSLBEG00000000881	rbm17	100	79.009	Labrus_bergylta
ENSAPLG00000004190	RBM17	99	70.588	ENSLACG00000017297	RBM17	99	70.588	Latimeria_chalumnae
ENSAPLG00000004190	RBM17	100	88.642	ENSLOCG00000015659	rbm17	100	88.642	Lepisosteus_oculatus
ENSAPLG00000004190	RBM17	100	95.086	ENSLAFG00000011629	RBM17	100	95.086	Loxodonta_africana
ENSAPLG00000004190	RBM17	100	95.771	ENSMFAG00000035521	RBM17	100	95.771	Macaca_fascicularis
ENSAPLG00000004190	RBM17	100	95.771	ENSMMUG00000015152	RBM17	100	95.771	Macaca_mulatta
ENSAPLG00000004190	RBM17	100	95.771	ENSMNEG00000017264	RBM17	100	95.771	Macaca_nemestrina
ENSAPLG00000004190	RBM17	100	95.771	ENSMLEG00000029340	RBM17	100	95.771	Mandrillus_leucophaeus
ENSAPLG00000004190	RBM17	100	79.481	ENSMAMG00000000387	rbm17	100	79.481	Mastacembelus_armatus
ENSAPLG00000004190	RBM17	100	81.754	ENSMZEG00005015179	rbm17	100	81.754	Maylandia_zebra
ENSAPLG00000004190	RBM17	100	97.549	ENSMGAG00000003981	RBM17	100	97.549	Meleagris_gallopavo
ENSAPLG00000004190	RBM17	100	95.556	ENSMAUG00000019247	Rbm17	100	95.556	Mesocricetus_auratus
ENSAPLG00000004190	RBM17	100	87.775	ENSMICG00000041489	-	100	87.775	Microcebus_murinus
ENSAPLG00000004190	RBM17	100	94.815	ENSMICG00000003976	-	100	94.815	Microcebus_murinus
ENSAPLG00000004190	RBM17	93	77.867	ENSMOCG00000014517	-	99	77.867	Microtus_ochrogaster
ENSAPLG00000004190	RBM17	100	95.556	ENSMOCG00000011847	Rbm17	100	95.556	Microtus_ochrogaster
ENSAPLG00000004190	RBM17	100	75.485	ENSMMOG00000010264	rbm17	100	74.272	Mola_mola
ENSAPLG00000004190	RBM17	100	96.020	ENSMODG00000016648	RBM17	100	96.020	Monodelphis_domestica
ENSAPLG00000004190	RBM17	100	79.529	ENSMALG00000010597	rbm17	100	79.529	Monopterus_albus
ENSAPLG00000004190	RBM17	100	95.309	MGP_CAROLIEiJ_G0023173	Rbm17	100	95.309	Mus_caroli
ENSAPLG00000004190	RBM17	100	95.309	ENSMUSG00000037197	Rbm17	100	95.309	Mus_musculus
ENSAPLG00000004190	RBM17	100	95.062	MGP_PahariEiJ_G0019233	Rbm17	100	95.062	Mus_pahari
ENSAPLG00000004190	RBM17	100	95.309	MGP_SPRETEiJ_G0024091	Rbm17	100	95.309	Mus_spretus
ENSAPLG00000004190	RBM17	86	94.236	ENSMPUG00000016359	RBM17	97	94.236	Mustela_putorius_furo
ENSAPLG00000004190	RBM17	100	90.796	ENSMLUG00000025709	-	100	89.303	Myotis_lucifugus
ENSAPLG00000004190	RBM17	100	93.350	ENSMLUG00000002302	-	100	93.350	Myotis_lucifugus
ENSAPLG00000004190	RBM17	100	67.413	ENSNGAG00000000663	-	100	66.915	Nannospalax_galili
ENSAPLG00000004190	RBM17	100	95.556	ENSNGAG00000000741	Rbm17	100	95.556	Nannospalax_galili
ENSAPLG00000004190	RBM17	100	78.519	ENSNBRG00000018148	rbm17	100	78.519	Neolamprologus_brichardi
ENSAPLG00000004190	RBM17	100	95.771	ENSNLEG00000033350	RBM17	100	95.771	Nomascus_leucogenys
ENSAPLG00000004190	RBM17	100	89.801	ENSMEUG00000011347	RBM17	100	89.801	Notamacropus_eugenii
ENSAPLG00000004190	RBM17	100	82.090	ENSOPRG00000002993	RBM17	100	82.090	Ochotona_princeps
ENSAPLG00000004190	RBM17	97	73.282	ENSODEG00000007286	-	99	73.282	Octodon_degus
ENSAPLG00000004190	RBM17	100	94.335	ENSODEG00000004393	RBM17	100	94.335	Octodon_degus
ENSAPLG00000004190	RBM17	100	84.521	ENSONIG00000011838	rbm17	100	84.521	Oreochromis_niloticus
ENSAPLG00000004190	RBM17	100	94.789	ENSOANG00000015455	RBM17	100	94.789	Ornithorhynchus_anatinus
ENSAPLG00000004190	RBM17	100	80.471	ENSORLG00000028798	rbm17	100	80.882	Oryzias_latipes
ENSAPLG00000004190	RBM17	100	80.471	ENSORLG00020004593	rbm17	100	79.310	Oryzias_latipes_hni
ENSAPLG00000004190	RBM17	100	83.824	ENSORLG00015000033	rbm17	100	83.824	Oryzias_latipes_hsok
ENSAPLG00000004190	RBM17	100	80.235	ENSOMEG00000012060	rbm17	100	87.500	Oryzias_melastigma
ENSAPLG00000004190	RBM17	100	95.062	ENSOGAG00000015687	RBM17	100	95.062	Otolemur_garnettii
ENSAPLG00000004190	RBM17	100	96.020	ENSOARG00000012975	RBM17	100	96.020	Ovis_aries
ENSAPLG00000004190	RBM17	100	95.771	ENSPPAG00000032347	RBM17	100	95.771	Pan_paniscus
ENSAPLG00000004190	RBM17	100	95.522	ENSPPRG00000010706	RBM17	100	95.522	Panthera_pardus
ENSAPLG00000004190	RBM17	100	95.522	ENSPTIG00000007596	RBM17	100	95.522	Panthera_tigris_altaica
ENSAPLG00000004190	RBM17	100	95.771	ENSPTRG00000002265	RBM17	100	95.771	Pan_troglodytes
ENSAPLG00000004190	RBM17	100	95.771	ENSPANG00000023425	RBM17	100	95.771	Papio_anubis
ENSAPLG00000004190	RBM17	100	80.282	ENSPKIG00000025526	rbm17	100	80.282	Paramormyrops_kingsleyae
ENSAPLG00000004190	RBM17	100	76.995	ENSPKIG00000005048	-	100	76.995	Paramormyrops_kingsleyae
ENSAPLG00000004190	RBM17	100	95.556	ENSPSIG00000012332	RBM17	100	95.556	Pelodiscus_sinensis
ENSAPLG00000004190	RBM17	100	76.812	ENSPMGG00000007980	rbm17	100	76.812	Periophthalmus_magnuspinnatus
ENSAPLG00000004190	RBM17	100	95.556	ENSPEMG00000014320	Rbm17	100	95.556	Peromyscus_maniculatus_bairdii
ENSAPLG00000004190	RBM17	100	95.545	ENSPCIG00000019260	-	100	95.545	Phascolarctos_cinereus
ENSAPLG00000004190	RBM17	100	78.538	ENSPFOG00000013271	rbm17	100	78.538	Poecilia_formosa
ENSAPLG00000004190	RBM17	100	78.774	ENSPLAG00000004455	rbm17	100	78.774	Poecilia_latipinna
ENSAPLG00000004190	RBM17	100	81.572	ENSPMEG00000014864	rbm17	100	81.572	Poecilia_mexicana
ENSAPLG00000004190	RBM17	100	77.830	ENSPREG00000015589	rbm17	100	77.830	Poecilia_reticulata
ENSAPLG00000004190	RBM17	99	70.250	ENSPPYG00000019881	-	100	70.000	Pongo_abelii
ENSAPLG00000004190	RBM17	100	95.771	ENSPPYG00000002067	RBM17	100	95.771	Pongo_abelii
ENSAPLG00000004190	RBM17	81	68.210	ENSPPYG00000019042	-	100	67.901	Pongo_abelii
ENSAPLG00000004190	RBM17	100	88.060	ENSPCAG00000016879	RBM17	100	88.060	Procavia_capensis
ENSAPLG00000004190	RBM17	100	95.771	ENSPCOG00000027881	RBM17	100	95.771	Propithecus_coquereli
ENSAPLG00000004190	RBM17	100	84.577	ENSPVAG00000015499	RBM17	100	83.085	Pteropus_vampyrus
ENSAPLG00000004190	RBM17	100	77.363	ENSPNYG00000015274	rbm17	100	77.612	Pundamilia_nyererei
ENSAPLG00000004190	RBM17	100	79.765	ENSPNAG00000030046	rbm17	100	79.765	Pygocentrus_nattereri
ENSAPLG00000004190	RBM17	100	95.556	ENSRNOG00000018767	Rbm17	100	95.556	Rattus_norvegicus
ENSAPLG00000004190	RBM17	100	95.771	ENSRBIG00000043727	RBM17	100	95.771	Rhinopithecus_bieti
ENSAPLG00000004190	RBM17	100	95.771	ENSRROG00000044142	RBM17	100	95.771	Rhinopithecus_roxellana
ENSAPLG00000004190	RBM17	100	85.075	ENSSBOG00000023653	-	100	85.075	Saimiri_boliviensis_boliviensis
ENSAPLG00000004190	RBM17	100	95.522	ENSSBOG00000031661	-	100	95.522	Saimiri_boliviensis_boliviensis
ENSAPLG00000004190	RBM17	100	96.020	ENSSHAG00000012480	-	100	96.020	Sarcophilus_harrisii
ENSAPLG00000004190	RBM17	100	83.292	ENSSFOG00015009892	rbm17	100	83.292	Scleropages_formosus
ENSAPLG00000004190	RBM17	100	79.208	ENSSMAG00000012368	rbm17	100	78.358	Scophthalmus_maximus
ENSAPLG00000004190	RBM17	100	83.010	ENSSDUG00000015015	rbm17	100	83.293	Seriola_dumerili
ENSAPLG00000004190	RBM17	100	83.010	ENSSLDG00000014486	rbm17	100	83.293	Seriola_lalandi_dorsalis
ENSAPLG00000004190	RBM17	59	77.215	ENSSARG00000001792	-	100	77.215	Sorex_araneus
ENSAPLG00000004190	RBM17	99	95.761	ENSSPUG00000001036	RBM17	99	95.761	Sphenodon_punctatus
ENSAPLG00000004190	RBM17	100	84.521	ENSSPAG00000002338	rbm17	100	84.521	Stegastes_partitus
ENSAPLG00000004190	RBM17	100	95.771	ENSSSCG00000011134	RBM17	100	95.771	Sus_scrofa
ENSAPLG00000004190	RBM17	100	97.531	ENSTGUG00000002013	RBM17	100	97.531	Taeniopygia_guttata
ENSAPLG00000004190	RBM17	100	82.555	ENSTRUG00000010698	rbm17	100	82.555	Takifugu_rubripes
ENSAPLG00000004190	RBM17	100	82.683	ENSTNIG00000006892	rbm17	100	82.683	Tetraodon_nigroviridis
ENSAPLG00000004190	RBM17	100	74.876	ENSTBEG00000014686	RBM17	100	74.876	Tupaia_belangeri
ENSAPLG00000004190	RBM17	90	95.568	ENSTTRG00000001344	RBM17	100	95.568	Tursiops_truncatus
ENSAPLG00000004190	RBM17	100	91.294	ENSUAMG00000009499	RBM17	100	91.294	Ursus_americanus
ENSAPLG00000004190	RBM17	100	95.274	ENSUMAG00000012237	RBM17	100	95.274	Ursus_maritimus
ENSAPLG00000004190	RBM17	100	81.841	ENSVPAG00000005497	RBM17	100	81.841	Vicugna_pacos
ENSAPLG00000004190	RBM17	100	91.294	ENSVVUG00000006780	RBM17	100	91.294	Vulpes_vulpes
ENSAPLG00000004190	RBM17	99	87.250	ENSXETG00000018123	rbm17	100	87.250	Xenopus_tropicalis
ENSAPLG00000004190	RBM17	100	81.327	ENSXMAG00000008674	rbm17	100	81.327	Xiphophorus_maculatus