EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000004258 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 4797 bases
Position: chrKB743136.1:686135-690931
Accession: 101792961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003761	PolyA_pol	PF01743.20	5.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004368	TRNT1-201	2099	XM_005019907	ENSAPLP00000003761	403 (aa)	XP_005019964	U3I940

Gene Model

Click here to download ENSAPLG00000004258's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000004258	TRNT1	96	76.227	ENSG00000072756	TRNT1	89	76.227	Homo_sapiens
ENSAPLG00000004258	TRNT1	95	68.848	ENSAPOG00000013687	trnt1	89	68.848	Acanthochromis_polyacanthus
ENSAPLG00000004258	TRNT1	96	75.835	ENSAMEG00000014520	TRNT1	89	75.835	Ailuropoda_melanoleuca
ENSAPLG00000004258	TRNT1	99	66.005	ENSACIG00000021706	trnt1	95	66.005	Amphilophus_citrinellus
ENSAPLG00000004258	TRNT1	95	68.831	ENSAOCG00000024612	trnt1	90	68.831	Amphiprion_ocellaris
ENSAPLG00000004258	TRNT1	91	62.228	ENSAPEG00000022627	trnt1	85	62.228	Amphiprion_percula
ENSAPLG00000004258	TRNT1	95	71.018	ENSATEG00000008928	trnt1	95	71.018	Anabas_testudineus
ENSAPLG00000004258	TRNT1	93	78.933	ENSACAG00000005657	TRNT1	86	78.933	Anolis_carolinensis
ENSAPLG00000004258	TRNT1	96	76.227	ENSANAG00000024802	TRNT1	89	76.227	Aotus_nancymaae
ENSAPLG00000004258	TRNT1	99	64.516	ENSACLG00000022227	trnt1	94	64.516	Astatotilapia_calliptera
ENSAPLG00000004258	TRNT1	100	66.089	ENSAMXG00000003960	trnt1	94	66.089	Astyanax_mexicanus
ENSAPLG00000004258	TRNT1	96	76.486	ENSBTAG00000019534	TRNT1	89	76.486	Bos_taurus
ENSAPLG00000004258	TRNT1	95	42.714	WBGene00010089	hpo-31	89	42.714	Caenorhabditis_elegans
ENSAPLG00000004258	TRNT1	96	77.003	ENSCJAG00000015466	TRNT1	89	77.003	Callithrix_jacchus
ENSAPLG00000004258	TRNT1	96	76.486	ENSCAFG00000005985	TRNT1	89	76.486	Canis_familiaris
ENSAPLG00000004258	TRNT1	96	76.486	ENSCAFG00020014746	TRNT1	89	76.486	Canis_lupus_dingo
ENSAPLG00000004258	TRNT1	96	77.778	ENSCHIG00000007030	TRNT1	89	77.778	Capra_hircus
ENSAPLG00000004258	TRNT1	96	75.711	ENSTSYG00000013390	TRNT1	89	75.711	Carlito_syrichta
ENSAPLG00000004258	TRNT1	94	61.640	ENSCAPG00000006891	TRNT1	100	61.640	Cavia_aperea
ENSAPLG00000004258	TRNT1	96	74.677	ENSCPOG00000007849	TRNT1	89	74.677	Cavia_porcellus
ENSAPLG00000004258	TRNT1	99	74.627	ENSCCAG00000002919	TRNT1	97	76.350	Cebus_capucinus
ENSAPLG00000004258	TRNT1	95	76.562	ENSCATG00000031985	TRNT1	87	76.562	Cercocebus_atys
ENSAPLG00000004258	TRNT1	96	75.711	ENSCLAG00000005186	TRNT1	89	75.711	Chinchilla_lanigera
ENSAPLG00000004258	TRNT1	95	77.083	ENSCSAG00000011052	TRNT1	88	77.083	Chlorocebus_sabaeus
ENSAPLG00000004258	TRNT1	79	81.410	ENSCHOG00000005712	TRNT1	74	81.410	Choloepus_hoffmanni
ENSAPLG00000004258	TRNT1	96	83.204	ENSCPBG00000017636	TRNT1	88	83.204	Chrysemys_picta_bellii
ENSAPLG00000004258	TRNT1	95	45.431	ENSCING00000007069	-	94	45.431	Ciona_intestinalis
ENSAPLG00000004258	TRNT1	95	44.935	ENSCSAVG00000007494	-	91	44.935	Ciona_savignyi
ENSAPLG00000004258	TRNT1	95	77.083	ENSCANG00000039030	TRNT1	88	77.083	Colobus_angolensis_palliatus
ENSAPLG00000004258	TRNT1	96	76.227	ENSCGRG00001009998	Trnt1	89	76.227	Cricetulus_griseus_chok1gshd
ENSAPLG00000004258	TRNT1	96	76.227	ENSCGRG00000013410	Trnt1	89	76.227	Cricetulus_griseus_crigri
ENSAPLG00000004258	TRNT1	97	68.974	ENSCSEG00000008157	trnt1	95	68.974	Cynoglossus_semilaevis
ENSAPLG00000004258	TRNT1	95	68.668	ENSCVAG00000019770	trnt1	90	68.668	Cyprinodon_variegatus
ENSAPLG00000004258	TRNT1	100	68.564	ENSDARG00000075297	trnt1	94	68.564	Danio_rerio
ENSAPLG00000004258	TRNT1	96	75.969	ENSDNOG00000008837	TRNT1	89	75.969	Dasypus_novemcinctus
ENSAPLG00000004258	TRNT1	96	75.969	ENSDORG00000014035	Trnt1	89	75.969	Dipodomys_ordii
ENSAPLG00000004258	TRNT1	94	47.258	FBgn0037369	CG2100	79	47.258	Drosophila_melanogaster
ENSAPLG00000004258	TRNT1	55	81.448	ENSETEG00000018177	TRNT1	89	81.448	Echinops_telfairi
ENSAPLG00000004258	TRNT1	97	64.615	ENSEBUG00000012779	-	92	64.615	Eptatretus_burgeri
ENSAPLG00000004258	TRNT1	96	77.778	ENSEASG00005003577	TRNT1	89	77.778	Equus_asinus_asinus
ENSAPLG00000004258	TRNT1	96	77.519	ENSECAG00000014420	TRNT1	89	77.519	Equus_caballus
ENSAPLG00000004258	TRNT1	96	74.677	ENSEEUG00000009567	TRNT1	89	74.677	Erinaceus_europaeus
ENSAPLG00000004258	TRNT1	95	68.750	ENSELUG00000003802	trnt1	89	68.750	Esox_lucius
ENSAPLG00000004258	TRNT1	96	76.744	ENSFCAG00000026805	TRNT1	89	76.744	Felis_catus
ENSAPLG00000004258	TRNT1	95	91.645	ENSFALG00000013539	TRNT1	99	91.645	Ficedula_albicollis
ENSAPLG00000004258	TRNT1	96	75.452	ENSFDAG00000018412	TRNT1	89	75.452	Fukomys_damarensis
ENSAPLG00000004258	TRNT1	99	66.749	ENSFHEG00000019294	trnt1	95	66.749	Fundulus_heteroclitus
ENSAPLG00000004258	TRNT1	94	68.865	ENSGMOG00000007460	trnt1	89	68.865	Gadus_morhua
ENSAPLG00000004258	TRNT1	96	90.155	ENSGALG00000017368	TRNT1	90	90.155	Gallus_gallus
ENSAPLG00000004258	TRNT1	95	72.324	ENSGAFG00000008647	trnt1	90	72.324	Gambusia_affinis
ENSAPLG00000004258	TRNT1	95	68.325	ENSGACG00000011903	trnt1	96	68.325	Gasterosteus_aculeatus
ENSAPLG00000004258	TRNT1	96	84.238	ENSGAGG00000020942	TRNT1	88	84.238	Gopherus_agassizii
ENSAPLG00000004258	TRNT1	96	76.227	ENSGGOG00000015286	TRNT1	89	76.227	Gorilla_gorilla
ENSAPLG00000004258	TRNT1	99	64.516	ENSHBUG00000002797	trnt1	94	64.516	Haplochromis_burtoni
ENSAPLG00000004258	TRNT1	96	75.711	ENSHGLG00000003649	TRNT1	89	75.711	Heterocephalus_glaber_female
ENSAPLG00000004258	TRNT1	98	69.773	ENSHGLG00000000221	-	91	69.773	Heterocephalus_glaber_female
ENSAPLG00000004258	TRNT1	96	74.935	ENSHGLG00100016421	TRNT1	89	74.935	Heterocephalus_glaber_male
ENSAPLG00000004258	TRNT1	99	64.764	ENSHCOG00000010618	trnt1	94	64.764	Hippocampus_comes
ENSAPLG00000004258	TRNT1	96	67.700	ENSIPUG00000000971	trnt1	90	67.700	Ictalurus_punctatus
ENSAPLG00000004258	TRNT1	96	76.166	ENSSTOG00000000150	TRNT1	89	76.166	Ictidomys_tridecemlineatus
ENSAPLG00000004258	TRNT1	95	76.562	ENSJJAG00000018561	Trnt1	88	76.562	Jaculus_jaculus
ENSAPLG00000004258	TRNT1	95	68.831	ENSKMAG00000011307	trnt1	90	68.831	Kryptolebias_marmoratus
ENSAPLG00000004258	TRNT1	91	65.217	ENSLBEG00000019457	trnt1	86	65.217	Labrus_bergylta
ENSAPLG00000004258	TRNT1	100	72.772	ENSLACG00000013227	TRNT1	93	72.772	Latimeria_chalumnae
ENSAPLG00000004258	TRNT1	100	69.975	ENSLOCG00000011105	trnt1	92	69.975	Lepisosteus_oculatus
ENSAPLG00000004258	TRNT1	96	76.486	ENSLAFG00000023191	TRNT1	89	76.486	Loxodonta_africana
ENSAPLG00000004258	TRNT1	95	76.823	ENSMFAG00000045113	TRNT1	87	76.823	Macaca_fascicularis
ENSAPLG00000004258	TRNT1	95	76.823	ENSMMUG00000017983	TRNT1	87	76.823	Macaca_mulatta
ENSAPLG00000004258	TRNT1	95	76.823	ENSMNEG00000037805	TRNT1	87	76.823	Macaca_nemestrina
ENSAPLG00000004258	TRNT1	95	76.702	ENSMLEG00000033671	TRNT1	99	76.702	Mandrillus_leucophaeus
ENSAPLG00000004258	TRNT1	99	66.749	ENSMAMG00000023401	trnt1	94	66.749	Mastacembelus_armatus
ENSAPLG00000004258	TRNT1	99	64.516	ENSMZEG00005009141	trnt1	94	64.516	Maylandia_zebra
ENSAPLG00000004258	TRNT1	79	89.342	ENSMGAG00000009971	TRNT1	99	89.342	Meleagris_gallopavo
ENSAPLG00000004258	TRNT1	96	76.227	ENSMAUG00000020707	Trnt1	89	76.227	Mesocricetus_auratus
ENSAPLG00000004258	TRNT1	96	77.261	ENSMICG00000016615	TRNT1	89	77.261	Microcebus_murinus
ENSAPLG00000004258	TRNT1	96	76.486	ENSMOCG00000004539	Trnt1	89	76.486	Microtus_ochrogaster
ENSAPLG00000004258	TRNT1	96	67.358	ENSMMOG00000010742	trnt1	91	67.358	Mola_mola
ENSAPLG00000004258	TRNT1	96	77.778	ENSMODG00000004368	TRNT1	89	77.778	Monodelphis_domestica
ENSAPLG00000004258	TRNT1	95	68.571	ENSMALG00000008376	trnt1	90	68.571	Monopterus_albus
ENSAPLG00000004258	TRNT1	96	75.194	MGP_CAROLIEiJ_G0028698	Trnt1	89	75.194	Mus_caroli
ENSAPLG00000004258	TRNT1	96	75.194	ENSMUSG00000013736	Trnt1	89	75.194	Mus_musculus
ENSAPLG00000004258	TRNT1	96	75.452	MGP_PahariEiJ_G0022449	Trnt1	89	75.452	Mus_pahari
ENSAPLG00000004258	TRNT1	96	75.194	MGP_SPRETEiJ_G0029726	Trnt1	89	75.194	Mus_spretus
ENSAPLG00000004258	TRNT1	96	76.227	ENSMPUG00000017017	TRNT1	89	76.227	Mustela_putorius_furo
ENSAPLG00000004258	TRNT1	95	76.823	ENSMLUG00000011864	TRNT1	99	76.823	Myotis_lucifugus
ENSAPLG00000004258	TRNT1	96	74.935	ENSNGAG00000000537	Trnt1	89	74.935	Nannospalax_galili
ENSAPLG00000004258	TRNT1	80	64.396	ENSNBRG00000023606	trnt1	93	64.396	Neolamprologus_brichardi
ENSAPLG00000004258	TRNT1	96	76.744	ENSNLEG00000003226	TRNT1	89	76.744	Nomascus_leucogenys
ENSAPLG00000004258	TRNT1	95	78.906	ENSMEUG00000004684	TRNT1	88	78.906	Notamacropus_eugenii
ENSAPLG00000004258	TRNT1	95	70.496	ENSOPRG00000015067	TRNT1	99	70.496	Ochotona_princeps
ENSAPLG00000004258	TRNT1	96	75.969	ENSODEG00000007597	TRNT1	89	75.969	Octodon_degus
ENSAPLG00000004258	TRNT1	99	65.261	ENSONIG00000020273	trnt1	93	65.261	Oreochromis_niloticus
ENSAPLG00000004258	TRNT1	99	72.705	ENSOANG00000007514	TRNT1	93	72.705	Ornithorhynchus_anatinus
ENSAPLG00000004258	TRNT1	96	74.419	ENSOCUG00000008580	TRNT1	90	74.419	Oryctolagus_cuniculus
ENSAPLG00000004258	TRNT1	95	67.801	ENSORLG00000003165	trnt1	90	67.801	Oryzias_latipes
ENSAPLG00000004258	TRNT1	95	68.325	ENSORLG00020022060	trnt1	90	68.325	Oryzias_latipes_hni
ENSAPLG00000004258	TRNT1	95	67.277	ENSORLG00015018915	trnt1	90	67.277	Oryzias_latipes_hsok
ENSAPLG00000004258	TRNT1	95	66.057	ENSOMEG00000003331	trnt1	91	66.057	Oryzias_melastigma
ENSAPLG00000004258	TRNT1	96	77.778	ENSOARG00000008631	TRNT1	89	77.778	Ovis_aries
ENSAPLG00000004258	TRNT1	96	76.486	ENSPPAG00000043566	TRNT1	89	76.486	Pan_paniscus
ENSAPLG00000004258	TRNT1	96	76.486	ENSPPRG00000001327	TRNT1	89	76.486	Panthera_pardus
ENSAPLG00000004258	TRNT1	96	76.486	ENSPTIG00000011448	TRNT1	89	76.486	Panthera_tigris_altaica
ENSAPLG00000004258	TRNT1	96	76.227	ENSPTRG00000014564	TRNT1	89	76.227	Pan_troglodytes
ENSAPLG00000004258	TRNT1	95	76.562	ENSPANG00000025944	TRNT1	87	76.562	Papio_anubis
ENSAPLG00000004258	TRNT1	99	69.500	ENSPKIG00000020015	trnt1	93	69.500	Paramormyrops_kingsleyae
ENSAPLG00000004258	TRNT1	96	83.033	ENSPSIG00000017356	TRNT1	99	83.056	Pelodiscus_sinensis
ENSAPLG00000004258	TRNT1	95	69.870	ENSPMGG00000008888	trnt1	89	69.870	Periophthalmus_magnuspinnatus
ENSAPLG00000004258	TRNT1	96	75.452	ENSPEMG00000019845	Trnt1	89	75.452	Peromyscus_maniculatus_bairdii
ENSAPLG00000004258	TRNT1	96	77.519	ENSPCIG00000030436	TRNT1	89	77.519	Phascolarctos_cinereus
ENSAPLG00000004258	TRNT1	95	72.063	ENSPFOG00000006194	trnt1	90	72.063	Poecilia_formosa
ENSAPLG00000004258	TRNT1	95	72.063	ENSPLAG00000015623	trnt1	95	72.063	Poecilia_latipinna
ENSAPLG00000004258	TRNT1	95	71.802	ENSPMEG00000012216	trnt1	95	71.802	Poecilia_mexicana
ENSAPLG00000004258	TRNT1	95	72.513	ENSPREG00000021470	trnt1	90	72.513	Poecilia_reticulata
ENSAPLG00000004258	TRNT1	96	76.486	ENSPPYG00000013702	TRNT1	89	76.486	Pongo_abelii
ENSAPLG00000004258	TRNT1	95	77.546	ENSPCAG00000001951	TRNT1	100	77.546	Procavia_capensis
ENSAPLG00000004258	TRNT1	96	77.261	ENSPCOG00000022228	TRNT1	89	77.261	Propithecus_coquereli
ENSAPLG00000004258	TRNT1	95	75.196	ENSPVAG00000008784	TRNT1	99	75.196	Pteropus_vampyrus
ENSAPLG00000004258	TRNT1	99	64.268	ENSPNYG00000003120	trnt1	94	64.268	Pundamilia_nyererei
ENSAPLG00000004258	TRNT1	100	65.842	ENSPNAG00000000565	trnt1	94	65.842	Pygocentrus_nattereri
ENSAPLG00000004258	TRNT1	96	75.969	ENSRNOG00000006432	Trnt1	89	75.969	Rattus_norvegicus
ENSAPLG00000004258	TRNT1	95	75.781	ENSRBIG00000042632	TRNT1	88	75.781	Rhinopithecus_bieti
ENSAPLG00000004258	TRNT1	95	76.562	ENSRROG00000036866	TRNT1	88	76.562	Rhinopithecus_roxellana
ENSAPLG00000004258	TRNT1	96	76.227	ENSSBOG00000021208	TRNT1	89	76.227	Saimiri_boliviensis_boliviensis
ENSAPLG00000004258	TRNT1	96	76.744	ENSSHAG00000018861	TRNT1	89	76.744	Sarcophilus_harrisii
ENSAPLG00000004258	TRNT1	99	69.250	ENSSFOG00015020844	trnt1	93	69.250	Scleropages_formosus
ENSAPLG00000004258	TRNT1	95	68.930	ENSSMAG00000015432	trnt1	88	68.930	Scophthalmus_maximus
ENSAPLG00000004258	TRNT1	99	65.509	ENSSDUG00000012320	trnt1	95	65.509	Seriola_dumerili
ENSAPLG00000004258	TRNT1	60	63.485	ENSSLDG00000016463	-	91	63.598	Seriola_lalandi_dorsalis
ENSAPLG00000004258	TRNT1	99	65.509	ENSSLDG00000009325	trnt1	95	65.509	Seriola_lalandi_dorsalis
ENSAPLG00000004258	TRNT1	95	82.768	ENSSPUG00000014153	TRNT1	99	82.768	Sphenodon_punctatus
ENSAPLG00000004258	TRNT1	95	67.273	ENSSPAG00000021005	trnt1	90	67.273	Stegastes_partitus
ENSAPLG00000004258	TRNT1	96	75.969	ENSSSCG00000011529	TRNT1	89	76.053	Sus_scrofa
ENSAPLG00000004258	TRNT1	96	91.192	ENSTGUG00000010192	TRNT1	95	91.192	Taeniopygia_guttata
ENSAPLG00000004258	TRNT1	99	65.261	ENSTRUG00000001088	trnt1	94	65.261	Takifugu_rubripes
ENSAPLG00000004258	TRNT1	99	66.749	ENSTNIG00000007363	trnt1	93	66.749	Tetraodon_nigroviridis
ENSAPLG00000004258	TRNT1	62	61.044	ENSTBEG00000006367	TRNT1	81	61.044	Tupaia_belangeri
ENSAPLG00000004258	TRNT1	96	75.711	ENSTTRG00000007803	TRNT1	89	75.711	Tursiops_truncatus
ENSAPLG00000004258	TRNT1	96	76.486	ENSUAMG00000022574	TRNT1	89	76.486	Ursus_americanus
ENSAPLG00000004258	TRNT1	96	76.227	ENSUMAG00000024092	TRNT1	89	76.227	Ursus_maritimus
ENSAPLG00000004258	TRNT1	96	76.486	ENSVVUG00000012810	TRNT1	89	76.486	Vulpes_vulpes
ENSAPLG00000004258	TRNT1	95	67.708	ENSXETG00000025091	trnt1	94	68.158	Xenopus_tropicalis
ENSAPLG00000004258	TRNT1	95	72.063	ENSXCOG00000010150	trnt1	90	72.063	Xiphophorus_couchianus
ENSAPLG00000004258	TRNT1	95	72.585	ENSXMAG00000002227	trnt1	90	72.585	Xiphophorus_maculatus