EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSAPLG00000004261 (Gene tree)
Gene ID: -
Gene Symbol: GSPT1
Alias: -
Full Name: G1 to S phase transition 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 12897 bases
Position: chrKB743005.1:641223-654119
Accession: 101800945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003805	GTP_EFTU	PF00009.27	5.8e-47	1	1
ENSAPLP00000003805	GTP_EFTU_D2	PF03144.25	2.4e-08	1	1
ENSAPLP00000003805	GTP_EFTU_D3	PF03143.17	2.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004412	GSPT1-201	3244	XM_005018448	ENSAPLP00000003805	523 (aa)	XP_012953880	U3I984

Gene Model

Click here to download ENSAPLG00000004261's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000004261	GSPT1	81	41.121	ENSAPLG00000007791	HBS1L	63	41.121
ENSAPLG00000004261	GSPT1	73	35.088	ENSAPLG00000008691	EEF1A2	94	35.533
ENSAPLG00000004261	GSPT1	82	38.462	ENSAPLG00000009349	EEF1A1	95	38.462