EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000004310 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 15522 bases
Position: chrKB743059.1:59050-74571
Accession: 101791845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000003853	Nop52	PF05997.12	5.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004460	RRP1B-201	2145	XM_005019094	ENSAPLP00000003853	714 (aa)	-	R0LJ20

Gene Model

Click here to download ENSAPLG00000004310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000004310	RRP1B	100	47.632	ENSG00000160208	RRP1B	94	47.027	Homo_sapiens
ENSAPLG00000004310	RRP1B	84	58.982	ENSAMEG00000011401	RRP1B	62	64.463	Ailuropoda_melanoleuca
ENSAPLG00000004310	RRP1B	54	51.389	ENSAOCG00000017894	-	82	61.111	Amphiprion_ocellaris
ENSAPLG00000004310	RRP1B	100	50.899	ENSACAG00000017851	RRP1B	90	50.897	Anolis_carolinensis
ENSAPLG00000004310	RRP1B	100	45.799	ENSANAG00000034889	RRP1B	94	46.185	Aotus_nancymaae
ENSAPLG00000004310	RRP1B	81	55.090	ENSBTAG00000017418	RRP1B	94	43.478	Bos_taurus
ENSAPLG00000004310	RRP1B	100	45.811	ENSCJAG00000017077	RRP1B	94	45.405	Callithrix_jacchus
ENSAPLG00000004310	RRP1B	100	45.890	ENSCHIG00000021519	RRP1B	94	45.765	Capra_hircus
ENSAPLG00000004310	RRP1B	51	47.354	ENSTSYG00000012831	RRP1	76	48.732	Carlito_syrichta
ENSAPLG00000004310	RRP1B	84	52.647	ENSCPOG00000002396	RRP1B	73	52.023	Cavia_porcellus
ENSAPLG00000004310	RRP1B	100	46.269	ENSCCAG00000029384	RRP1B	94	45.811	Cebus_capucinus
ENSAPLG00000004310	RRP1B	53	50.130	ENSCCAG00000029828	RRP1	74	52.890	Cebus_capucinus
ENSAPLG00000004310	RRP1B	100	46.783	ENSCATG00000017423	RRP1B	94	46.185	Cercocebus_atys
ENSAPLG00000004310	RRP1B	51	46.866	ENSCLAG00000011639	RRP1	70	51.875	Chinchilla_lanigera
ENSAPLG00000004310	RRP1B	100	47.091	ENSCSAG00000007961	RRP1B	94	46.685	Chlorocebus_sabaeus
ENSAPLG00000004310	RRP1B	100	66.899	ENSCPBG00000010310	RRP1B	98	67.549	Chrysemys_picta_bellii
ENSAPLG00000004310	RRP1B	56	32.432	ENSCING00000003304	-	66	35.256	Ciona_intestinalis
ENSAPLG00000004310	RRP1B	100	46.829	ENSCANG00000040952	RRP1B	94	46.559	Colobus_angolensis_palliatus
ENSAPLG00000004310	RRP1B	100	43.886	ENSCGRG00001023882	-	94	43.437	Cricetulus_griseus_chok1gshd
ENSAPLG00000004310	RRP1B	100	43.338	ENSCGRG00001010889	-	94	42.895	Cricetulus_griseus_chok1gshd
ENSAPLG00000004310	RRP1B	50	50.693	ENSCGRG00001011920	Rrp1	78	52.450	Cricetulus_griseus_chok1gshd
ENSAPLG00000004310	RRP1B	100	43.338	ENSCGRG00000001553	Rrp1b	97	42.895	Cricetulus_griseus_crigri
ENSAPLG00000004310	RRP1B	50	50.693	ENSCGRG00000008915	Rrp1	78	52.450	Cricetulus_griseus_crigri
ENSAPLG00000004310	RRP1B	56	55.056	ENSCSEG00000020711	-	76	55.056	Cynoglossus_semilaevis
ENSAPLG00000004310	RRP1B	53	49.606	ENSDNOG00000019880	RRP1	73	53.636	Dasypus_novemcinctus
ENSAPLG00000004310	RRP1B	93	66.279	ENSETEG00000019489	RRP1B	94	41.304	Echinops_telfairi
ENSAPLG00000004310	RRP1B	51	48.913	ENSEASG00005001673	RRP1	76	51.585	Equus_asinus_asinus
ENSAPLG00000004310	RRP1B	100	45.884	ENSEASG00005001687	RRP1B	94	46.081	Equus_asinus_asinus
ENSAPLG00000004310	RRP1B	51	46.612	ENSECAG00000015703	RRP1	77	51.895	Equus_caballus
ENSAPLG00000004310	RRP1B	100	46.311	ENSECAG00000018018	RRP1B	94	45.924	Equus_caballus
ENSAPLG00000004310	RRP1B	61	55.738	ENSELUG00000015885	-	77	48.070	Esox_lucius
ENSAPLG00000004310	RRP1B	97	74.569	ENSFALG00000002024	RRP1B	100	73.851	Ficedula_albicollis
ENSAPLG00000004310	RRP1B	100	42.276	ENSFDAG00000010899	RRP1B	94	42.041	Fukomys_damarensis
ENSAPLG00000004310	RRP1B	51	47.297	ENSFDAG00000013728	RRP1	70	51.682	Fukomys_damarensis
ENSAPLG00000004310	RRP1B	56	67.273	ENSFHEG00000016314	-	50	66.667	Fundulus_heteroclitus
ENSAPLG00000004310	RRP1B	60	47.273	ENSGMOG00000001953	-	62	47.273	Gadus_morhua
ENSAPLG00000004310	RRP1B	100	80.112	ENSGALG00000035696	RRP1B	94	80.112	Gallus_gallus
ENSAPLG00000004310	RRP1B	100	35.870	ENSGACG00000001438	rrp1	65	49.068	Gasterosteus_aculeatus
ENSAPLG00000004310	RRP1B	100	65.782	ENSGAGG00000000375	RRP1B	94	66.295	Gopherus_agassizii
ENSAPLG00000004310	RRP1B	100	47.497	ENSGGOG00000012069	RRP1B	94	46.765	Gorilla_gorilla
ENSAPLG00000004310	RRP1B	77	50.932	ENSHGLG00100002232	RRP1B	82	50.932	Heterocephalus_glaber_male
ENSAPLG00000004310	RRP1B	69	43.351	ENSHCOG00000018388	-	57	43.750	Hippocampus_comes
ENSAPLG00000004310	RRP1B	58	47.432	ENSIPUG00000000673	-	65	47.507	Ictalurus_punctatus
ENSAPLG00000004310	RRP1B	52	49.465	ENSSTOG00000011116	RRP1	77	51.453	Ictidomys_tridecemlineatus
ENSAPLG00000004310	RRP1B	100	41.744	ENSJJAG00000021279	Rrp1b	94	40.775	Jaculus_jaculus
ENSAPLG00000004310	RRP1B	61	51.613	ENSKMAG00000005539	rrp1	67	51.775	Kryptolebias_marmoratus
ENSAPLG00000004310	RRP1B	100	44.295	ENSLACG00000017332	-	94	43.883	Latimeria_chalumnae
ENSAPLG00000004310	RRP1B	94	42.836	ENSLAFG00000000766	RRP1B	76	58.204	Loxodonta_africana
ENSAPLG00000004310	RRP1B	100	47.453	ENSMFAG00000039152	RRP1B	94	46.854	Macaca_fascicularis
ENSAPLG00000004310	RRP1B	100	46.237	ENSMMUG00000000104	RRP1B	94	45.638	Macaca_mulatta
ENSAPLG00000004310	RRP1B	100	47.721	ENSMNEG00000034269	RRP1B	94	47.122	Macaca_nemestrina
ENSAPLG00000004310	RRP1B	100	46.955	ENSMLEG00000040044	RRP1B	99	46.351	Mandrillus_leucophaeus
ENSAPLG00000004310	RRP1B	53	47.792	ENSMLEG00000037797	RRP1	79	52.187	Mandrillus_leucophaeus
ENSAPLG00000004310	RRP1B	100	79.860	ENSMGAG00000014591	RRP1B	94	79.441	Meleagris_gallopavo
ENSAPLG00000004310	RRP1B	100	47.211	ENSMICG00000004686	RRP1B	94	47.354	Microcebus_murinus
ENSAPLG00000004310	RRP1B	100	51.355	ENSMODG00000021033	RRP1B	94	50.811	Monodelphis_domestica
ENSAPLG00000004310	RRP1B	89	42.089	ENSMPUG00000009810	RRP1B	99	41.088	Mustela_putorius_furo
ENSAPLG00000004310	RRP1B	100	43.356	ENSNGAG00000021073	Rrp1b	94	43.087	Nannospalax_galili
ENSAPLG00000004310	RRP1B	75	81.579	ENSMEUG00000003226	-	82	81.579	Notamacropus_eugenii
ENSAPLG00000004310	RRP1B	78	54.266	ENSODEG00000013177	RRP1B	65	54.266	Octodon_degus
ENSAPLG00000004310	RRP1B	99	46.676	ENSOANG00000006470	RRP1B	94	45.479	Ornithorhynchus_anatinus
ENSAPLG00000004310	RRP1B	77	51.525	ENSOCUG00000025931	RRP1B	79	51.525	Oryctolagus_cuniculus
ENSAPLG00000004310	RRP1B	65	49.538	ENSORLG00020007199	-	57	49.849	Oryzias_latipes_hni
ENSAPLG00000004310	RRP1B	65	49.231	ENSORLG00015004425	-	51	49.849	Oryzias_latipes_hsok
ENSAPLG00000004310	RRP1B	68	47.674	ENSOMEG00000016910	-	54	48.256	Oryzias_melastigma
ENSAPLG00000004310	RRP1B	59	59.633	ENSOGAG00000009872	RRP1B	66	61.290	Otolemur_garnettii
ENSAPLG00000004310	RRP1B	100	45.144	ENSOARG00000011314	RRP1B	100	45.020	Ovis_aries
ENSAPLG00000004310	RRP1B	100	48.168	ENSPPAG00000035319	RRP1B	99	47.497	Pan_paniscus
ENSAPLG00000004310	RRP1B	53	50.000	ENSPPAG00000029050	RRP1	73	54.651	Pan_paniscus
ENSAPLG00000004310	RRP1B	52	43.351	ENSPTIG00000019473	RRP1	78	45.954	Panthera_tigris_altaica
ENSAPLG00000004310	RRP1B	64	55.891	ENSPTIG00000016894	RRP1B	76	61.475	Panthera_tigris_altaica
ENSAPLG00000004310	RRP1B	52	49.211	ENSPANG00000015097	RRP1	73	52.187	Papio_anubis
ENSAPLG00000004310	RRP1B	100	47.051	ENSPANG00000011090	RRP1B	94	46.452	Papio_anubis
ENSAPLG00000004310	RRP1B	100	65.503	ENSPSIG00000008152	RRP1B	90	66.017	Pelodiscus_sinensis
ENSAPLG00000004310	RRP1B	51	52.267	ENSPCIG00000015523	-	73	54.971	Phascolarctos_cinereus
ENSAPLG00000004310	RRP1B	100	51.701	ENSPCIG00000015513	RRP1B	94	52.517	Phascolarctos_cinereus
ENSAPLG00000004310	RRP1B	65	47.761	ENSPREG00000015673	-	57	48.011	Poecilia_reticulata
ENSAPLG00000004310	RRP1B	53	48.446	ENSPPYG00000011474	RRP1	73	52.907	Pongo_abelii
ENSAPLG00000004310	RRP1B	100	47.226	ENSPPYG00000011470	RRP1B	94	46.486	Pongo_abelii
ENSAPLG00000004310	RRP1B	90	76.842	ENSPCAG00000013723	RRP1B	51	76.842	Procavia_capensis
ENSAPLG00000004310	RRP1B	100	47.619	ENSPCOG00000017927	RRP1B	94	47.332	Propithecus_coquereli
ENSAPLG00000004310	RRP1B	100	42.005	ENSPVAG00000001436	RRP1B	94	42.780	Pteropus_vampyrus
ENSAPLG00000004310	RRP1B	100	44.082	ENSRNOG00000001194	Rrp1b	94	43.681	Rattus_norvegicus
ENSAPLG00000004310	RRP1B	100	43.649	ENSRBIG00000041689	RRP1B	94	43.185	Rhinopithecus_bieti
ENSAPLG00000004310	RRP1B	53	47.917	ENSRBIG00000032082	RRP1	73	54.810	Rhinopithecus_bieti
ENSAPLG00000004310	RRP1B	53	47.917	ENSRROG00000039799	RRP1	81	51.688	Rhinopithecus_roxellana
ENSAPLG00000004310	RRP1B	100	47.432	ENSRROG00000031499	RRP1B	94	46.964	Rhinopithecus_roxellana
ENSAPLG00000004310	RRP1B	100	44.444	ENSSBOG00000034727	RRP1B	99	44.198	Saimiri_boliviensis_boliviensis
ENSAPLG00000004310	RRP1B	100	52.789	ENSSHAG00000017789	RRP1B	94	52.925	Sarcophilus_harrisii
ENSAPLG00000004310	RRP1B	65	48.071	ENSSMAG00000016847	-	79	47.130	Scophthalmus_maximus
ENSAPLG00000004310	RRP1B	60	51.613	ENSSARG00000003108	-	59	57.983	Sorex_araneus
ENSAPLG00000004310	RRP1B	100	56.772	ENSSPUG00000002834	RRP1B	94	56.361	Sphenodon_punctatus
ENSAPLG00000004310	RRP1B	62	47.647	ENSSPAG00000005370	-	50	47.139	Stegastes_partitus
ENSAPLG00000004310	RRP1B	78	54.601	ENSSSCG00000021698	RRP1B	99	40.188	Sus_scrofa
ENSAPLG00000004310	RRP1B	100	74.930	ENSTGUG00000005926	RRP1B	100	74.930	Taeniopygia_guttata
ENSAPLG00000004310	RRP1B	59	50.000	ENSTNIG00000005053	rrp1	63	50.637	Tetraodon_nigroviridis
ENSAPLG00000004310	RRP1B	75	55.956	ENSTBEG00000000422	RRP1B	89	57.864	Tupaia_belangeri
ENSAPLG00000004310	RRP1B	72	53.582	ENSTTRG00000000723	RRP1B	72	53.582	Tursiops_truncatus
ENSAPLG00000004310	RRP1B	70	58.859	ENSUAMG00000026765	RRP1B	94	58.859	Ursus_americanus
ENSAPLG00000004310	RRP1B	70	59.091	ENSUMAG00000025510	RRP1B	87	62.712	Ursus_maritimus
ENSAPLG00000004310	RRP1B	60	54.671	ENSXETG00000013683	rrp1b	65	55.172	Xenopus_tropicalis
ENSAPLG00000004310	RRP1B	63	51.923	ENSXMAG00000023123	-	54	52.525	Xiphophorus_maculatus