EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000004313 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 20148 bases
Position: chrKB743182.1:85096-105243
Accession: 101793534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000004009	ResIII	PF04851.15	8.8e-26	1	2
ENSAPLP00000004009	ResIII	PF04851.15	8.8e-26	2	2
ENSAPLP00000004009	DEAD	PF00270.29	1.6e-52	1	2
ENSAPLP00000004009	DEAD	PF00270.29	1.6e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004616	SNRNP200-201	6366	XM_005020594	ENSAPLP00000004009	2121 (aa)	XP_012956045	R0LG86

Gene Model

Click here to download ENSAPLG00000004313's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000004313	SNRNP200	81	45.127	ENSAPLG00000012589	-	91	45.127
ENSAPLG00000004313	SNRNP200	73	32.073	ENSAPLG00000013639	HFM1	56	32.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000004313	SNRNP200	100	97.690	ENSG00000144028	SNRNP200	99	97.690	Homo_sapiens
ENSAPLG00000004313	SNRNP200	99	91.012	ENSAPOG00000010223	snrnp200	99	90.948	Acanthochromis_polyacanthus
ENSAPLG00000004313	SNRNP200	100	97.737	ENSAMEG00000008996	SNRNP200	99	97.737	Ailuropoda_melanoleuca
ENSAPLG00000004313	SNRNP200	98	90.364	ENSACIG00000001764	snrnp200	98	90.364	Amphilophus_citrinellus
ENSAPLG00000004313	SNRNP200	99	90.918	ENSAOCG00000024593	snrnp200	100	90.150	Amphiprion_ocellaris
ENSAPLG00000004313	SNRNP200	98	90.203	ENSAPEG00000012554	snrnp200	100	90.203	Amphiprion_percula
ENSAPLG00000004313	SNRNP200	99	90.918	ENSATEG00000022522	snrnp200	99	90.853	Anabas_testudineus
ENSAPLG00000004313	SNRNP200	99	97.710	ENSACAG00000000434	SNRNP200	99	97.710	Anolis_carolinensis
ENSAPLG00000004313	SNRNP200	100	93.142	ENSANAG00000036625	SNRNP200	99	93.565	Aotus_nancymaae
ENSAPLG00000004313	SNRNP200	99	90.776	ENSACLG00000011188	snrnp200	99	90.712	Astatotilapia_calliptera
ENSAPLG00000004313	SNRNP200	99	90.208	ENSAMXG00000005684	snrnp200	99	90.146	Astyanax_mexicanus
ENSAPLG00000004313	SNRNP200	100	97.313	ENSBTAG00000000848	SNRNP200	99	97.313	Bos_taurus
ENSAPLG00000004313	SNRNP200	100	97.690	ENSCJAG00000007514	SNRNP200	99	97.690	Callithrix_jacchus
ENSAPLG00000004313	SNRNP200	100	96.945	ENSCAFG00020019979	SNRNP200	100	97.433	Canis_lupus_dingo
ENSAPLG00000004313	SNRNP200	100	97.501	ENSCHIG00000020611	SNRNP200	99	97.501	Capra_hircus
ENSAPLG00000004313	SNRNP200	100	97.737	ENSTSYG00000010467	SNRNP200	99	97.737	Carlito_syrichta
ENSAPLG00000004313	SNRNP200	100	97.366	ENSCAPG00000017234	SNRNP200	99	97.366	Cavia_aperea
ENSAPLG00000004313	SNRNP200	100	97.595	ENSCPOG00000006776	SNRNP200	99	97.595	Cavia_porcellus
ENSAPLG00000004313	SNRNP200	100	97.690	ENSCCAG00000033962	SNRNP200	99	97.690	Cebus_capucinus
ENSAPLG00000004313	SNRNP200	100	97.690	ENSCATG00000015790	SNRNP200	99	97.690	Cercocebus_atys
ENSAPLG00000004313	SNRNP200	100	97.548	ENSCLAG00000004116	SNRNP200	99	97.548	Chinchilla_lanigera
ENSAPLG00000004313	SNRNP200	100	97.643	ENSCSAG00000017369	SNRNP200	99	97.643	Chlorocebus_sabaeus
ENSAPLG00000004313	SNRNP200	74	100.000	ENSCHOG00000012981	-	58	100.000	Choloepus_hoffmanni
ENSAPLG00000004313	SNRNP200	100	98.305	ENSCPBG00000022571	SNRNP200	99	98.305	Chrysemys_picta_bellii
ENSAPLG00000004313	SNRNP200	99	76.764	ENSCING00000005082	-	99	77.057	Ciona_intestinalis
ENSAPLG00000004313	SNRNP200	95	97.511	ENSCANG00000033932	SNRNP200	100	97.511	Colobus_angolensis_palliatus
ENSAPLG00000004313	SNRNP200	100	97.690	ENSCGRG00001022610	Snrnp200	99	97.690	Cricetulus_griseus_chok1gshd
ENSAPLG00000004313	SNRNP200	100	97.128	ENSCGRG00000016472	Snrnp200	99	97.128	Cricetulus_griseus_crigri
ENSAPLG00000004313	SNRNP200	100	89.769	ENSCSEG00000016399	snrnp200	99	89.769	Cynoglossus_semilaevis
ENSAPLG00000004313	SNRNP200	100	85.667	ENSCVAG00000017631	snrnp200	99	85.667	Cyprinodon_variegatus
ENSAPLG00000004313	SNRNP200	100	90.288	ENSDARG00000077536	snrnp200	99	90.288	Danio_rerio
ENSAPLG00000004313	SNRNP200	100	96.275	ENSDNOG00000011227	SNRNP200	99	96.275	Dasypus_novemcinctus
ENSAPLG00000004313	SNRNP200	100	94.915	ENSDORG00000005861	Snrnp200	99	94.915	Dipodomys_ordii
ENSAPLG00000004313	SNRNP200	100	74.684	FBgn0263599	l(3)72Ab	99	74.590	Drosophila_melanogaster
ENSAPLG00000004313	SNRNP200	95	98.342	ENSETEG00000000162	SNRNP200	74	98.342	Echinops_telfairi
ENSAPLG00000004313	SNRNP200	84	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSAPLG00000004313	SNRNP200	100	96.620	ENSEASG00005001884	SNRNP200	99	96.620	Equus_asinus_asinus
ENSAPLG00000004313	SNRNP200	100	97.737	ENSECAG00000019675	SNRNP200	99	98.684	Equus_caballus
ENSAPLG00000004313	SNRNP200	87	96.158	ENSEEUG00000012178	SNRNP200	91	96.148	Erinaceus_europaeus
ENSAPLG00000004313	SNRNP200	99	90.728	ENSELUG00000018948	snrnp200	99	90.665	Esox_lucius
ENSAPLG00000004313	SNRNP200	100	97.784	ENSFCAG00000010699	SNRNP200	99	97.784	Felis_catus
ENSAPLG00000004313	SNRNP200	94	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSAPLG00000004313	SNRNP200	100	97.501	ENSFDAG00000004683	SNRNP200	99	97.501	Fukomys_damarensis
ENSAPLG00000004313	SNRNP200	100	88.072	ENSFHEG00000003786	snrnp200	99	88.072	Fundulus_heteroclitus
ENSAPLG00000004313	SNRNP200	100	89.647	ENSGMOG00000004881	snrnp200	99	89.600	Gadus_morhua
ENSAPLG00000004313	SNRNP200	100	88.213	ENSGAFG00000010807	snrnp200	99	88.213	Gambusia_affinis
ENSAPLG00000004313	SNRNP200	100	90.122	ENSGACG00000011474	snrnp200	99	90.028	Gasterosteus_aculeatus
ENSAPLG00000004313	SNRNP200	95	98.303	ENSGAGG00000016069	SNRNP200	98	98.303	Gopherus_agassizii
ENSAPLG00000004313	SNRNP200	100	97.690	ENSGGOG00000005174	SNRNP200	99	97.690	Gorilla_gorilla
ENSAPLG00000004313	SNRNP200	98	88.047	ENSHBUG00000011322	snrnp200	99	88.094	Haplochromis_burtoni
ENSAPLG00000004313	SNRNP200	100	97.595	ENSHGLG00000006654	SNRNP200	99	97.595	Heterocephalus_glaber_female
ENSAPLG00000004313	SNRNP200	100	97.595	ENSHGLG00100018594	SNRNP200	99	97.595	Heterocephalus_glaber_male
ENSAPLG00000004313	SNRNP200	100	97.690	ENSSTOG00000016351	SNRNP200	99	97.690	Ictidomys_tridecemlineatus
ENSAPLG00000004313	SNRNP200	100	97.548	ENSJJAG00000023659	Snrnp200	99	97.548	Jaculus_jaculus
ENSAPLG00000004313	SNRNP200	100	87.735	ENSKMAG00000003665	snrnp200	99	87.735	Kryptolebias_marmoratus
ENSAPLG00000004313	SNRNP200	100	90.618	ENSLBEG00000021585	snrnp200	99	90.618	Labrus_bergylta
ENSAPLG00000004313	SNRNP200	82	94.263	ENSLACG00000000226	SNRNP200	99	94.263	Latimeria_chalumnae
ENSAPLG00000004313	SNRNP200	100	91.985	ENSLOCG00000015198	snrnp200	99	91.985	Lepisosteus_oculatus
ENSAPLG00000004313	SNRNP200	100	97.548	ENSLAFG00000015626	SNRNP200	99	97.548	Loxodonta_africana
ENSAPLG00000004313	SNRNP200	100	97.643	ENSMFAG00000040174	SNRNP200	99	97.661	Macaca_fascicularis
ENSAPLG00000004313	SNRNP200	100	97.643	ENSMMUG00000023261	SNRNP200	99	97.643	Macaca_mulatta
ENSAPLG00000004313	SNRNP200	100	97.595	ENSMNEG00000032398	SNRNP200	99	97.595	Macaca_nemestrina
ENSAPLG00000004313	SNRNP200	100	97.690	ENSMLEG00000019083	SNRNP200	99	97.690	Mandrillus_leucophaeus
ENSAPLG00000004313	SNRNP200	100	90.292	ENSMAMG00000007851	snrnp200	99	90.245	Mastacembelus_armatus
ENSAPLG00000004313	SNRNP200	98	88.047	ENSMZEG00005010787	snrnp200	99	88.094	Maylandia_zebra
ENSAPLG00000004313	SNRNP200	97	99.613	ENSMGAG00000001831	SNRNP200	100	99.613	Meleagris_gallopavo
ENSAPLG00000004313	SNRNP200	100	97.643	ENSMAUG00000011825	Snrnp200	99	97.643	Mesocricetus_auratus
ENSAPLG00000004313	SNRNP200	100	97.643	ENSMICG00000004710	SNRNP200	99	97.643	Microcebus_murinus
ENSAPLG00000004313	SNRNP200	100	95.144	ENSMOCG00000011814	Snrnp200	99	95.144	Microtus_ochrogaster
ENSAPLG00000004313	SNRNP200	99	89.073	ENSMMOG00000014167	snrnp200	99	89.015	Mola_mola
ENSAPLG00000004313	SNRNP200	100	97.454	ENSMODG00000008475	SNRNP200	99	97.454	Monodelphis_domestica
ENSAPLG00000004313	SNRNP200	99	90.823	ENSMALG00000001973	snrnp200	99	90.759	Monopterus_albus
ENSAPLG00000004313	SNRNP200	100	97.548	MGP_CAROLIEiJ_G0024250	Snrnp200	99	97.548	Mus_caroli
ENSAPLG00000004313	SNRNP200	100	97.501	ENSMUSG00000003660	Snrnp200	99	97.501	Mus_musculus
ENSAPLG00000004313	SNRNP200	100	97.548	MGP_PahariEiJ_G0025695	Snrnp200	99	97.548	Mus_pahari
ENSAPLG00000004313	SNRNP200	100	97.501	MGP_SPRETEiJ_G0025170	Snrnp200	99	97.501	Mus_spretus
ENSAPLG00000004313	SNRNP200	100	97.784	ENSMPUG00000008949	SNRNP200	99	97.784	Mustela_putorius_furo
ENSAPLG00000004313	SNRNP200	100	97.175	ENSMLUG00000010493	SNRNP200	99	97.175	Myotis_lucifugus
ENSAPLG00000004313	SNRNP200	100	93.588	ENSMLUG00000027511	-	99	93.588	Myotis_lucifugus
ENSAPLG00000004313	SNRNP200	100	97.690	ENSNGAG00000021993	Snrnp200	99	97.690	Nannospalax_galili
ENSAPLG00000004313	SNRNP200	91	90.551	ENSNBRG00000017960	snrnp200	98	90.603	Neolamprologus_brichardi
ENSAPLG00000004313	SNRNP200	100	93.071	ENSNLEG00000000025	SNRNP200	98	94.090	Nomascus_leucogenys
ENSAPLG00000004313	SNRNP200	100	99.048	ENSMEUG00000010532	SNRNP200	78	99.048	Notamacropus_eugenii
ENSAPLG00000004313	SNRNP200	97	96.225	ENSOPRG00000015464	SNRNP200	97	96.225	Ochotona_princeps
ENSAPLG00000004313	SNRNP200	100	97.595	ENSODEG00000008366	SNRNP200	99	97.595	Octodon_degus
ENSAPLG00000004313	SNRNP200	99	90.634	ENSONIG00000010714	snrnp200	99	90.570	Oreochromis_niloticus
ENSAPLG00000004313	SNRNP200	100	97.548	ENSOCUG00000009864	SNRNP200	99	97.548	Oryctolagus_cuniculus
ENSAPLG00000004313	SNRNP200	100	90.382	ENSORLG00000012286	snrnp200	100	90.356	Oryzias_latipes
ENSAPLG00000004313	SNRNP200	100	90.382	ENSORLG00020004648	snrnp200	99	90.382	Oryzias_latipes_hni
ENSAPLG00000004313	SNRNP200	100	90.335	ENSORLG00015019114	snrnp200	100	90.442	Oryzias_latipes_hsok
ENSAPLG00000004313	SNRNP200	99	90.587	ENSOMEG00000011834	snrnp200	99	90.523	Oryzias_melastigma
ENSAPLG00000004313	SNRNP200	100	97.737	ENSOGAG00000006879	SNRNP200	99	97.737	Otolemur_garnettii
ENSAPLG00000004313	SNRNP200	100	96.466	ENSOARG00000013949	SNRNP200	99	96.466	Ovis_aries
ENSAPLG00000004313	SNRNP200	100	97.690	ENSPPAG00000041559	SNRNP200	99	97.690	Pan_paniscus
ENSAPLG00000004313	SNRNP200	100	97.784	ENSPPRG00000004435	SNRNP200	99	97.784	Panthera_pardus
ENSAPLG00000004313	SNRNP200	100	97.407	ENSPTIG00000006380	SNRNP200	99	97.407	Panthera_tigris_altaica
ENSAPLG00000004313	SNRNP200	100	97.690	ENSPTRG00000012230	SNRNP200	99	97.690	Pan_troglodytes
ENSAPLG00000004313	SNRNP200	100	97.643	ENSPANG00000006017	SNRNP200	99	97.643	Papio_anubis
ENSAPLG00000004313	SNRNP200	100	91.183	ENSPKIG00000014762	snrnp200	99	91.183	Paramormyrops_kingsleyae
ENSAPLG00000004313	SNRNP200	100	97.361	ENSPSIG00000008580	SNRNP200	99	97.361	Pelodiscus_sinensis
ENSAPLG00000004313	SNRNP200	100	97.548	ENSPCIG00000023050	SNRNP200	99	97.548	Phascolarctos_cinereus
ENSAPLG00000004313	SNRNP200	100	90.716	ENSPFOG00000015110	snrnp200	99	90.716	Poecilia_formosa
ENSAPLG00000004313	SNRNP200	98	90.549	ENSPLAG00000006711	snrnp200	99	90.549	Poecilia_latipinna
ENSAPLG00000004313	SNRNP200	98	90.549	ENSPMEG00000021166	snrnp200	99	90.549	Poecilia_mexicana
ENSAPLG00000004313	SNRNP200	100	90.665	ENSPREG00000008875	snrnp200	99	90.665	Poecilia_reticulata
ENSAPLG00000004313	SNRNP200	100	97.690	ENSPPYG00000012068	SNRNP200	99	97.690	Pongo_abelii
ENSAPLG00000004313	SNRNP200	95	97.489	ENSPCAG00000008536	SNRNP200	86	97.489	Procavia_capensis
ENSAPLG00000004313	SNRNP200	100	97.690	ENSPCOG00000024608	SNRNP200	99	97.690	Propithecus_coquereli
ENSAPLG00000004313	SNRNP200	96	99.283	ENSPVAG00000005860	SNRNP200	91	99.283	Pteropus_vampyrus
ENSAPLG00000004313	SNRNP200	99	86.274	ENSPNYG00000017476	snrnp200	99	86.225	Pundamilia_nyererei
ENSAPLG00000004313	SNRNP200	100	85.809	ENSPNAG00000010998	snrnp200	99	85.809	Pygocentrus_nattereri
ENSAPLG00000004313	SNRNP200	100	97.643	ENSRNOG00000012157	Snrnp200	99	97.643	Rattus_norvegicus
ENSAPLG00000004313	SNRNP200	100	97.690	ENSRBIG00000044690	-	99	97.690	Rhinopithecus_bieti
ENSAPLG00000004313	SNRNP200	100	97.690	ENSRROG00000037952	-	99	97.690	Rhinopithecus_roxellana
ENSAPLG00000004313	SNRNP200	100	97.690	ENSSBOG00000035471	SNRNP200	99	97.690	Saimiri_boliviensis_boliviensis
ENSAPLG00000004313	SNRNP200	97	97.436	ENSSHAG00000000758	SNRNP200	100	97.436	Sarcophilus_harrisii
ENSAPLG00000004313	SNRNP200	99	91.154	ENSSFOG00015018826	snrnp200	99	91.089	Scleropages_formosus
ENSAPLG00000004313	SNRNP200	99	90.634	ENSSMAG00000005463	snrnp200	99	90.570	Scophthalmus_maximus
ENSAPLG00000004313	SNRNP200	99	90.823	ENSSDUG00000021410	snrnp200	99	90.759	Seriola_dumerili
ENSAPLG00000004313	SNRNP200	99	90.823	ENSSLDG00000010884	snrnp200	99	90.759	Seriola_lalandi_dorsalis
ENSAPLG00000004313	SNRNP200	95	98.603	ENSSARG00000010728	SNRNP200	95	98.603	Sorex_araneus
ENSAPLG00000004313	SNRNP200	100	97.737	ENSSPUG00000003726	-	99	97.737	Sphenodon_punctatus
ENSAPLG00000004313	SNRNP200	99	90.965	ENSSPAG00000001842	snrnp200	99	90.901	Stegastes_partitus
ENSAPLG00000004313	SNRNP200	100	97.643	ENSSSCG00000008127	SNRNP200	99	97.643	Sus_scrofa
ENSAPLG00000004313	SNRNP200	99	89.264	ENSTGUG00000014475	-	100	89.264	Taeniopygia_guttata
ENSAPLG00000004313	SNRNP200	99	90.539	ENSTRUG00000001307	snrnp200	99	90.476	Takifugu_rubripes
ENSAPLG00000004313	SNRNP200	100	86.053	ENSTNIG00000004320	snrnp200	99	79.200	Tetraodon_nigroviridis
ENSAPLG00000004313	SNRNP200	83	99.394	ENSTBEG00000003329	-	67	99.394	Tupaia_belangeri
ENSAPLG00000004313	SNRNP200	100	97.407	ENSTTRG00000004983	SNRNP200	99	97.407	Tursiops_truncatus
ENSAPLG00000004313	SNRNP200	75	91.445	ENSUAMG00000008395	-	93	91.445	Ursus_americanus
ENSAPLG00000004313	SNRNP200	100	97.784	ENSUMAG00000012385	SNRNP200	99	97.784	Ursus_maritimus
ENSAPLG00000004313	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSAPLG00000004313	SNRNP200	100	97.554	ENSVVUG00000026247	SNRNP200	99	97.805	Vulpes_vulpes
ENSAPLG00000004313	SNRNP200	100	94.397	ENSXETG00000001243	snrnp200	99	94.397	Xenopus_tropicalis
ENSAPLG00000004313	SNRNP200	98	90.685	ENSXMAG00000002058	snrnp200	98	90.685	Xiphophorus_maculatus