EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000004469 (Gene tree)
Gene ID: -
Gene Symbol: XRCC6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 12035 bases
Position: chrKB744454.1:112163-124197
Accession: 101794332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000004007	SAP	PF02037.27	3.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000004614	XRCC6-201	1662	XM_005028471	ENSAPLP00000004007	553 (aa)	-	U3I9T6

Gene Model

Click here to download ENSAPLG00000004469's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000004469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000004469	XRCC6	99	70.962	ENSG00000196419	XRCC6	97	71.402	Homo_sapiens
ENSAPLG00000004469	XRCC6	98	60.806	ENSAPOG00000012704	xrcc6	90	60.806	Acanthochromis_polyacanthus
ENSAPLG00000004469	XRCC6	98	60.917	ENSACIG00000021277	xrcc6	89	60.917	Amphilophus_citrinellus
ENSAPLG00000004469	XRCC6	98	60.806	ENSAOCG00000021344	xrcc6	89	60.806	Amphiprion_ocellaris
ENSAPLG00000004469	XRCC6	98	61.355	ENSAPEG00000020712	xrcc6	89	61.355	Amphiprion_percula
ENSAPLG00000004469	XRCC6	98	60.367	ENSATEG00000007119	xrcc6	89	60.367	Anabas_testudineus
ENSAPLG00000004469	XRCC6	99	70.962	ENSANAG00000018684	XRCC6	98	71.271	Aotus_nancymaae
ENSAPLG00000004469	XRCC6	99	62.250	ENSANAG00000020017	-	97	62.615	Aotus_nancymaae
ENSAPLG00000004469	XRCC6	99	59.820	ENSANAG00000023445	-	97	60.146	Aotus_nancymaae
ENSAPLG00000004469	XRCC6	99	62.613	ENSANAG00000035230	-	97	62.983	Aotus_nancymaae
ENSAPLG00000004469	XRCC6	98	60.806	ENSACLG00000018608	xrcc6	89	60.806	Astatotilapia_calliptera
ENSAPLG00000004469	XRCC6	98	63.004	ENSAMXG00000007545	xrcc6	89	63.004	Astyanax_mexicanus
ENSAPLG00000004469	XRCC6	99	70.962	ENSCJAG00000045512	XRCC6	97	71.402	Callithrix_jacchus
ENSAPLG00000004469	XRCC6	99	69.982	ENSTSYG00000011348	XRCC6	97	70.404	Carlito_syrichta
ENSAPLG00000004469	XRCC6	96	66.343	ENSCCAG00000030468	-	96	74.609	Cebus_capucinus
ENSAPLG00000004469	XRCC6	99	67.877	ENSCCAG00000030041	-	87	67.877	Cebus_capucinus
ENSAPLG00000004469	XRCC6	99	55.072	ENSCCAG00000035711	-	97	55.249	Cebus_capucinus
ENSAPLG00000004469	XRCC6	99	58.899	ENSCCAG00000037663	-	88	57.982	Cebus_capucinus
ENSAPLG00000004469	XRCC6	99	71.143	ENSCATG00000042366	XRCC6	97	71.587	Cercocebus_atys
ENSAPLG00000004469	XRCC6	99	71.067	ENSCLAG00000016669	XRCC6	91	71.067	Chinchilla_lanigera
ENSAPLG00000004469	XRCC6	99	71.143	ENSCSAG00000005784	XRCC6	90	71.143	Chlorocebus_sabaeus
ENSAPLG00000004469	XRCC6	99	81.752	ENSCPBG00000020535	XRCC6	90	81.752	Chrysemys_picta_bellii
ENSAPLG00000004469	XRCC6	98	35.727	ENSCING00000000633	-	90	35.727	Ciona_intestinalis
ENSAPLG00000004469	XRCC6	99	71.143	ENSCANG00000031032	XRCC6	97	71.587	Colobus_angolensis_palliatus
ENSAPLG00000004469	XRCC6	100	63.538	ENSCGRG00001019029	Xrcc6	91	63.538	Cricetulus_griseus_chok1gshd
ENSAPLG00000004469	XRCC6	99	70.620	ENSCGRG00000001528	Xrcc6	90	70.620	Cricetulus_griseus_crigri
ENSAPLG00000004469	XRCC6	99	57.713	ENSCSEG00000020434	xrcc6	90	57.713	Cynoglossus_semilaevis
ENSAPLG00000004469	XRCC6	98	61.426	ENSCVAG00000002189	xrcc6	90	61.314	Cyprinodon_variegatus
ENSAPLG00000004469	XRCC6	99	61.664	ENSDARG00000071551	xrcc6	90	61.664	Danio_rerio
ENSAPLG00000004469	XRCC6	74	63.415	ENSETEG00000015333	-	68	63.260	Echinops_telfairi
ENSAPLG00000004469	XRCC6	100	70.036	ENSEASG00005001514	XRCC6	91	70.036	Equus_asinus_asinus
ENSAPLG00000004469	XRCC6	99	69.801	ENSECAG00000017563	XRCC6	98	69.801	Equus_caballus
ENSAPLG00000004469	XRCC6	99	58.951	ENSELUG00000020301	xrcc6	90	58.951	Esox_lucius
ENSAPLG00000004469	XRCC6	99	85.949	ENSFALG00000011908	XRCC6	87	85.949	Ficedula_albicollis
ENSAPLG00000004469	XRCC6	98	61.426	ENSFHEG00000016833	xrcc6	90	61.426	Fundulus_heteroclitus
ENSAPLG00000004469	XRCC6	98	52.834	ENSGMOG00000013524	xrcc6	89	52.834	Gadus_morhua
ENSAPLG00000004469	XRCC6	99	90.476	ENSGALG00000011932	XRCC6	89	90.476	Gallus_gallus
ENSAPLG00000004469	XRCC6	98	60.146	ENSGAFG00000008130	xrcc6	89	60.146	Gambusia_affinis
ENSAPLG00000004469	XRCC6	99	59.783	ENSGACG00000004868	xrcc6	89	59.783	Gasterosteus_aculeatus
ENSAPLG00000004469	XRCC6	99	81.752	ENSGAGG00000017518	XRCC6	90	81.752	Gopherus_agassizii
ENSAPLG00000004469	XRCC6	99	70.962	ENSGGOG00000015885	XRCC6	97	71.402	Gorilla_gorilla
ENSAPLG00000004469	XRCC6	98	61.172	ENSHBUG00000023281	xrcc6	96	61.172	Haplochromis_burtoni
ENSAPLG00000004469	XRCC6	99	70.705	ENSHGLG00000018078	XRCC6	91	70.705	Heterocephalus_glaber_female
ENSAPLG00000004469	XRCC6	99	70.705	ENSHGLG00100011264	XRCC6	91	70.705	Heterocephalus_glaber_male
ENSAPLG00000004469	XRCC6	98	58.608	ENSHCOG00000009821	xrcc6	89	58.608	Hippocampus_comes
ENSAPLG00000004469	XRCC6	99	61.232	ENSIPUG00000000767	xrcc6	90	61.232	Ictalurus_punctatus
ENSAPLG00000004469	XRCC6	99	71.067	ENSSTOG00000009490	XRCC6	91	71.067	Ictidomys_tridecemlineatus
ENSAPLG00000004469	XRCC6	99	62.568	ENSJJAG00000017136	Xrcc6	90	63.653	Jaculus_jaculus
ENSAPLG00000004469	XRCC6	98	60.878	ENSKMAG00000002141	xrcc6	90	60.878	Kryptolebias_marmoratus
ENSAPLG00000004469	XRCC6	98	60.989	ENSLBEG00000002691	xrcc6	89	60.989	Labrus_bergylta
ENSAPLG00000004469	XRCC6	80	59.223	ENSLOCG00000011533	xrcc6	87	59.223	Lepisosteus_oculatus
ENSAPLG00000004469	XRCC6	99	71.143	ENSMFAG00000003352	XRCC6	98	71.455	Macaca_fascicularis
ENSAPLG00000004469	XRCC6	99	71.143	ENSMMUG00000001856	XRCC6	97	71.587	Macaca_mulatta
ENSAPLG00000004469	XRCC6	99	71.143	ENSMNEG00000035076	XRCC6	98	71.507	Macaca_nemestrina
ENSAPLG00000004469	XRCC6	99	71.143	ENSMLEG00000019869	XRCC6	97	71.587	Mandrillus_leucophaeus
ENSAPLG00000004469	XRCC6	98	57.847	ENSMAMG00000003405	xrcc6	90	57.847	Mastacembelus_armatus
ENSAPLG00000004469	XRCC6	98	58.759	ENSMAMG00000003368	xrcc6	90	58.759	Mastacembelus_armatus
ENSAPLG00000004469	XRCC6	98	60.623	ENSMZEG00005028080	xrcc6	89	60.623	Maylandia_zebra
ENSAPLG00000004469	XRCC6	99	89.560	ENSMGAG00000012146	XRCC6	89	89.051	Meleagris_gallopavo
ENSAPLG00000004469	XRCC6	99	70.567	ENSMAUG00000017340	Xrcc6	90	70.567	Mesocricetus_auratus
ENSAPLG00000004469	XRCC6	99	70.163	ENSMOCG00000015717	Xrcc6	91	70.163	Microtus_ochrogaster
ENSAPLG00000004469	XRCC6	98	58.425	ENSMMOG00000003536	xrcc6	89	58.425	Mola_mola
ENSAPLG00000004469	XRCC6	98	60.367	ENSMALG00000013912	xrcc6	85	60.367	Monopterus_albus
ENSAPLG00000004469	XRCC6	100	63.899	MGP_CAROLIEiJ_G0020067	Xrcc6	91	63.899	Mus_caroli
ENSAPLG00000004469	XRCC6	100	69.134	ENSMUSG00000022471	Xrcc6	100	65.399	Mus_musculus
ENSAPLG00000004469	XRCC6	100	68.773	MGP_PahariEiJ_G0020069	Xrcc6	91	68.773	Mus_pahari
ENSAPLG00000004469	XRCC6	100	68.941	MGP_SPRETEiJ_G0020967	Xrcc6	95	68.941	Mus_spretus
ENSAPLG00000004469	XRCC6	100	68.592	ENSNGAG00000013750	Xrcc6	91	68.592	Nannospalax_galili
ENSAPLG00000004469	XRCC6	98	61.172	ENSNBRG00000004125	xrcc6	89	61.172	Neolamprologus_brichardi
ENSAPLG00000004469	XRCC6	99	69.873	ENSOPRG00000002386	XRCC6	95	69.873	Ochotona_princeps
ENSAPLG00000004469	XRCC6	99	69.801	ENSODEG00000015847	XRCC6	91	69.801	Octodon_degus
ENSAPLG00000004469	XRCC6	98	61.355	ENSONIG00000019715	xrcc6	89	61.355	Oreochromis_niloticus
ENSAPLG00000004469	XRCC6	75	75.845	ENSOANG00000011328	XRCC6	100	75.845	Ornithorhynchus_anatinus
ENSAPLG00000004469	XRCC6	99	70.236	ENSOCUG00000006948	XRCC6	91	70.236	Oryctolagus_cuniculus
ENSAPLG00000004469	XRCC6	98	60.512	ENSORLG00020007820	xrcc6	89	60.512	Oryzias_latipes_hni
ENSAPLG00000004469	XRCC6	98	60.695	ENSORLG00015006406	xrcc6	89	60.695	Oryzias_latipes_hsok
ENSAPLG00000004469	XRCC6	98	60.329	ENSOMEG00000008998	xrcc6	89	60.329	Oryzias_melastigma
ENSAPLG00000004469	XRCC6	99	69.439	ENSOGAG00000008821	XRCC6	91	69.439	Otolemur_garnettii
ENSAPLG00000004469	XRCC6	99	61.162	ENSPPAG00000037167	XRCC6	89	70.000	Pan_paniscus
ENSAPLG00000004469	XRCC6	99	70.962	ENSPTRG00000022548	XRCC6	97	71.402	Pan_troglodytes
ENSAPLG00000004469	XRCC6	99	70.962	ENSPTRG00000045824	XRCC6	97	71.402	Pan_troglodytes
ENSAPLG00000004469	XRCC6	99	70.962	ENSPANG00000001252	XRCC6	97	71.402	Papio_anubis
ENSAPLG00000004469	XRCC6	99	63.043	ENSPKIG00000003974	xrcc6	90	63.043	Paramormyrops_kingsleyae
ENSAPLG00000004469	XRCC6	97	60.405	ENSPMGG00000014220	xrcc6	91	60.405	Periophthalmus_magnuspinnatus
ENSAPLG00000004469	XRCC6	100	68.773	ENSPEMG00000023446	Xrcc6	91	68.773	Peromyscus_maniculatus_bairdii
ENSAPLG00000004469	XRCC6	99	70.620	ENSPCIG00000026409	XRCC6	90	70.620	Phascolarctos_cinereus
ENSAPLG00000004469	XRCC6	98	60.878	ENSPFOG00000017173	xrcc6	90	60.766	Poecilia_formosa
ENSAPLG00000004469	XRCC6	98	60.512	ENSPLAG00000000562	xrcc6	90	60.401	Poecilia_latipinna
ENSAPLG00000004469	XRCC6	98	60.695	ENSPMEG00000018478	xrcc6	90	60.584	Poecilia_mexicana
ENSAPLG00000004469	XRCC6	98	60.474	ENSPREG00000020957	xrcc6	84	60.474	Poecilia_reticulata
ENSAPLG00000004469	XRCC6	99	63.521	ENSPPYG00000011876	XRCC6	90	63.521	Pongo_abelii
ENSAPLG00000004469	XRCC6	99	68.897	ENSPVAG00000001168	XRCC6	91	68.897	Pteropus_vampyrus
ENSAPLG00000004469	XRCC6	98	60.550	ENSPNYG00000003815	xrcc6	90	57.192	Pundamilia_nyererei
ENSAPLG00000004469	XRCC6	100	69.134	ENSRNOG00000006392	Xrcc6	91	69.259	Rattus_norvegicus
ENSAPLG00000004469	XRCC6	99	65.336	ENSRBIG00000039794	XRCC6	97	65.683	Rhinopithecus_bieti
ENSAPLG00000004469	XRCC6	99	71.143	ENSRROG00000030297	XRCC6	97	71.614	Rhinopithecus_roxellana
ENSAPLG00000004469	XRCC6	73	61.084	ENSSBOG00000024724	-	99	61.084	Saimiri_boliviensis_boliviensis
ENSAPLG00000004469	XRCC6	99	68.978	ENSSHAG00000010790	XRCC6	90	68.978	Sarcophilus_harrisii
ENSAPLG00000004469	XRCC6	99	63.225	ENSSFOG00015014409	xrcc6	90	63.225	Scleropages_formosus
ENSAPLG00000004469	XRCC6	98	62.202	ENSSMAG00000006496	xrcc6	89	62.202	Scophthalmus_maximus
ENSAPLG00000004469	XRCC6	99	59.818	ENSSDUG00000007542	xrcc6	90	59.818	Seriola_dumerili
ENSAPLG00000004469	XRCC6	99	59.636	ENSSLDG00000009974	xrcc6	90	59.636	Seriola_lalandi_dorsalis
ENSAPLG00000004469	XRCC6	99	80.474	ENSSPUG00000012086	XRCC6	90	80.474	Sphenodon_punctatus
ENSAPLG00000004469	XRCC6	98	62.157	ENSSPAG00000015199	xrcc6	90	62.157	Stegastes_partitus
ENSAPLG00000004469	XRCC6	99	87.569	ENSTGUG00000009852	-	90	87.569	Taeniopygia_guttata
ENSAPLG00000004469	XRCC6	98	58.608	ENSTRUG00000017070	xrcc6	90	58.608	Takifugu_rubripes
ENSAPLG00000004469	XRCC6	98	58.696	ENSTNIG00000012947	xrcc6	93	58.696	Tetraodon_nigroviridis
ENSAPLG00000004469	XRCC6	99	64.899	ENSTBEG00000011736	XRCC6	94	64.899	Tupaia_belangeri
ENSAPLG00000004469	XRCC6	99	58.951	ENSTTRG00000006749	XRCC6	91	58.951	Tursiops_truncatus
ENSAPLG00000004469	XRCC6	98	60.512	ENSXMAG00000009691	xrcc6	90	60.512	Xiphophorus_maculatus