EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000005086 (Gene tree)
Gene ID: -
Gene Symbol: PTCD3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 13680 bases
Position: chrKB745354.1:60-13739
Accession: 101804718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000004689	PPR	PF01535.20	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000005307	PTCD3-201	1821	XM_005030251	ENSAPLP00000004689	607 (aa)	XP_005030308	U3IBR7

Gene Model

Click here to download ENSAPLG00000005086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000005086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000005086	PTCD3	96	45.470	ENSACIG00000022263	ptcd3	96	45.470	Amphilophus_citrinellus
ENSAPLG00000005086	PTCD3	97	47.555	ENSAOCG00000017186	ptcd3	86	47.555	Amphiprion_ocellaris
ENSAPLG00000005086	PTCD3	97	47.386	ENSAPEG00000016069	ptcd3	86	47.386	Amphiprion_percula
ENSAPLG00000005086	PTCD3	97	47.555	ENSACLG00000020653	ptcd3	88	47.555	Astatotilapia_calliptera
ENSAPLG00000005086	PTCD3	98	47.342	ENSAMXG00000011570	ptcd3	89	47.342	Astyanax_mexicanus
ENSAPLG00000005086	PTCD3	96	46.453	ENSCVAG00000020820	ptcd3	96	46.880	Cyprinodon_variegatus
ENSAPLG00000005086	PTCD3	94	42.732	ENSGAFG00000015291	ptcd3	93	43.608	Gambusia_affinis
ENSAPLG00000005086	PTCD3	97	47.723	ENSHBUG00000020056	ptcd3	93	47.723	Haplochromis_burtoni
ENSAPLG00000005086	PTCD3	97	45.854	ENSLBEG00000015349	ptcd3	88	45.854	Labrus_bergylta
ENSAPLG00000005086	PTCD3	97	47.723	ENSMZEG00005004980	ptcd3	88	47.723	Maylandia_zebra
ENSAPLG00000005086	PTCD3	97	72.175	ENSMGAG00000013124	PTCD3	95	72.213	Meleagris_gallopavo
ENSAPLG00000005086	PTCD3	97	47.386	ENSMALG00000013282	ptcd3	88	47.386	Monopterus_albus
ENSAPLG00000005086	PTCD3	96	44.674	ENSNBRG00000000447	ptcd3	96	44.674	Neolamprologus_brichardi
ENSAPLG00000005086	PTCD3	97	47.547	ENSONIG00000015886	ptcd3	90	47.350	Oreochromis_niloticus
ENSAPLG00000005086	PTCD3	98	46.990	ENSORLG00000008776	ptcd3	88	47.432	Oryzias_latipes
ENSAPLG00000005086	PTCD3	97	46.880	ENSORLG00020020676	ptcd3	87	46.880	Oryzias_latipes_hni
ENSAPLG00000005086	PTCD3	96	39.309	ENSORLG00015015978	ptcd3	99	40.033	Oryzias_latipes_hsok
ENSAPLG00000005086	PTCD3	96	46.587	ENSPFOG00000004442	ptcd3	90	46.587	Poecilia_formosa
ENSAPLG00000005086	PTCD3	87	45.796	ENSPLAG00000021401	ptcd3	88	46.512	Poecilia_latipinna
ENSAPLG00000005086	PTCD3	96	43.463	ENSPMEG00000007153	ptcd3	98	44.013	Poecilia_mexicana
ENSAPLG00000005086	PTCD3	97	48.087	ENSSFOG00015019643	ptcd3	94	48.087	Scleropages_formosus
ENSAPLG00000005086	PTCD3	85	77.369	ENSTGUG00000010760	PTCD3	95	77.369	Taeniopygia_guttata
ENSAPLG00000005086	PTCD3	97	47.368	ENSTRUG00000003939	ptcd3	89	47.368	Takifugu_rubripes