EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000005115 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 5025 bases
Position: chrKB743807.1:75665-80689
Accession: 101801164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000004665	LSM	PF01423.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000005283	LSM8-201	458	XM_005025563	ENSAPLP00000004665	99 (aa)	XP_005025620	U3IBP3

Gene Model

Click here to download ENSAPLG00000005115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000005115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000005115	LSM8	95	91.489	ENSG00000128534	LSM8	100	98.667	Homo_sapiens
ENSAPLG00000005115	LSM8	95	89.362	ENSAPOG00000008649	lsm8	95	89.362	Acanthochromis_polyacanthus
ENSAPLG00000005115	LSM8	95	91.489	ENSAMEG00000001162	LSM8	95	91.489	Ailuropoda_melanoleuca
ENSAPLG00000005115	LSM8	76	98.667	ENSACIG00000014694	lsm8	100	98.667	Amphilophus_citrinellus
ENSAPLG00000005115	LSM8	95	89.362	ENSAOCG00000013926	lsm8	95	89.362	Amphiprion_ocellaris
ENSAPLG00000005115	LSM8	95	89.362	ENSAPEG00000023502	lsm8	95	89.362	Amphiprion_percula
ENSAPLG00000005115	LSM8	76	98.667	ENSATEG00000023432	lsm8	100	98.667	Anabas_testudineus
ENSAPLG00000005115	LSM8	95	91.489	ENSANAG00000027771	LSM8	100	95.946	Aotus_nancymaae
ENSAPLG00000005115	LSM8	95	89.362	ENSACLG00000011253	lsm8	95	89.362	Astatotilapia_calliptera
ENSAPLG00000005115	LSM8	95	91.489	ENSAMXG00000042902	lsm8	95	91.489	Astyanax_mexicanus
ENSAPLG00000005115	LSM8	95	91.489	ENSBTAG00000012649	LSM8	95	91.489	Bos_taurus
ENSAPLG00000005115	LSM8	91	54.444	WBGene00003082	lsm-8	89	54.444	Caenorhabditis_elegans
ENSAPLG00000005115	LSM8	95	91.489	ENSCJAG00000046406	LSM8	100	95.946	Callithrix_jacchus
ENSAPLG00000005115	LSM8	93	92.391	ENSCAFG00000016459	LSM8	90	92.391	Canis_familiaris
ENSAPLG00000005115	LSM8	80	93.671	ENSCAFG00020012800	-	62	93.671	Canis_lupus_dingo
ENSAPLG00000005115	LSM8	95	91.489	ENSCAFG00020007643	-	95	91.489	Canis_lupus_dingo
ENSAPLG00000005115	LSM8	92	95.604	ENSCHIG00000014201	LSM8	97	95.604	Capra_hircus
ENSAPLG00000005115	LSM8	95	91.489	ENSTSYG00000032434	LSM8	95	91.489	Carlito_syrichta
ENSAPLG00000005115	LSM8	75	97.297	ENSCAPG00000008253	LSM8	100	97.297	Cavia_aperea
ENSAPLG00000005115	LSM8	95	91.489	ENSCPOG00000035673	LSM8	95	91.489	Cavia_porcellus
ENSAPLG00000005115	LSM8	95	91.489	ENSCCAG00000021329	LSM8	100	95.946	Cebus_capucinus
ENSAPLG00000005115	LSM8	95	91.489	ENSCATG00000045302	LSM8	100	95.946	Cercocebus_atys
ENSAPLG00000005115	LSM8	95	91.489	ENSCLAG00000003726	LSM8	95	91.489	Chinchilla_lanigera
ENSAPLG00000005115	LSM8	95	91.489	ENSCSAG00000010802	-	95	91.489	Chlorocebus_sabaeus
ENSAPLG00000005115	LSM8	91	92.222	ENSCSAG00000019007	-	94	92.222	Chlorocebus_sabaeus
ENSAPLG00000005115	LSM8	92	95.604	ENSCPBG00000008154	LSM8	93	95.604	Chrysemys_picta_bellii
ENSAPLG00000005115	LSM8	85	77.381	ENSCING00000024877	-	88	77.381	Ciona_intestinalis
ENSAPLG00000005115	LSM8	95	91.489	ENSCANG00000040728	LSM8	100	95.946	Colobus_angolensis_palliatus
ENSAPLG00000005115	LSM8	95	91.489	ENSCGRG00001000450	Lsm8	95	91.489	Cricetulus_griseus_chok1gshd
ENSAPLG00000005115	LSM8	86	98.824	ENSCGRG00000005587	Lsm8	100	98.824	Cricetulus_griseus_crigri
ENSAPLG00000005115	LSM8	73	97.222	ENSCSEG00000004164	lsm8	79	97.222	Cynoglossus_semilaevis
ENSAPLG00000005115	LSM8	100	84.848	ENSCVAG00000020547	lsm8	100	84.848	Cyprinodon_variegatus
ENSAPLG00000005115	LSM8	86	96.471	ENSDARG00000091656	lsm8	89	96.471	Danio_rerio
ENSAPLG00000005115	LSM8	95	91.489	ENSDNOG00000034613	LSM8	95	91.489	Dasypus_novemcinctus
ENSAPLG00000005115	LSM8	95	91.489	ENSDORG00000027868	Lsm8	95	91.489	Dipodomys_ordii
ENSAPLG00000005115	LSM8	95	65.957	FBgn0035271	CG2021	96	65.957	Drosophila_melanogaster
ENSAPLG00000005115	LSM8	91	95.556	ENSETEG00000011594	LSM8	94	95.556	Echinops_telfairi
ENSAPLG00000005115	LSM8	75	93.243	ENSEBUG00000012017	lsm8	100	93.243	Eptatretus_burgeri
ENSAPLG00000005115	LSM8	95	91.489	ENSEASG00005008932	LSM8	59	91.489	Equus_asinus_asinus
ENSAPLG00000005115	LSM8	92	95.604	ENSECAG00000024025	LSM8	83	95.604	Equus_caballus
ENSAPLG00000005115	LSM8	95	88.298	ENSELUG00000010138	lsm8	95	88.298	Esox_lucius
ENSAPLG00000005115	LSM8	95	91.489	ENSFCAG00000036620	-	95	91.489	Felis_catus
ENSAPLG00000005115	LSM8	92	63.736	ENSFCAG00000044794	-	93	63.736	Felis_catus
ENSAPLG00000005115	LSM8	91	95.556	ENSFALG00000010023	LSM8	94	95.556	Ficedula_albicollis
ENSAPLG00000005115	LSM8	95	91.489	ENSFDAG00000019530	LSM8	95	91.489	Fukomys_damarensis
ENSAPLG00000005115	LSM8	95	89.362	ENSFHEG00000013729	lsm8	95	89.362	Fundulus_heteroclitus
ENSAPLG00000005115	LSM8	91	95.556	ENSGALG00000009110	LSM8	94	95.556	Gallus_gallus
ENSAPLG00000005115	LSM8	100	84.848	ENSGAFG00000001135	lsm8	100	84.848	Gambusia_affinis
ENSAPLG00000005115	LSM8	92	95.604	ENSGAGG00000017366	LSM8	93	95.604	Gopherus_agassizii
ENSAPLG00000005115	LSM8	95	91.489	ENSGGOG00000041883	LSM8	95	91.489	Gorilla_gorilla
ENSAPLG00000005115	LSM8	95	89.362	ENSHBUG00000003646	lsm8	95	89.362	Haplochromis_burtoni
ENSAPLG00000005115	LSM8	63	93.548	ENSHGLG00000001988	-	90	93.548	Heterocephalus_glaber_female
ENSAPLG00000005115	LSM8	95	86.170	ENSHGLG00000019782	-	95	86.170	Heterocephalus_glaber_female
ENSAPLG00000005115	LSM8	95	87.234	ENSHGLG00100012166	-	95	87.234	Heterocephalus_glaber_male
ENSAPLG00000005115	LSM8	89	93.182	ENSHGLG00100003934	-	88	93.182	Heterocephalus_glaber_male
ENSAPLG00000005115	LSM8	100	84.848	ENSHCOG00000005037	lsm8	100	84.848	Hippocampus_comes
ENSAPLG00000005115	LSM8	95	91.489	ENSIPUG00000019811	NAA38	95	91.489	Ictalurus_punctatus
ENSAPLG00000005115	LSM8	95	91.489	ENSSTOG00000009039	LSM8	95	91.489	Ictidomys_tridecemlineatus
ENSAPLG00000005115	LSM8	86	87.059	ENSSTOG00000034801	-	79	87.059	Ictidomys_tridecemlineatus
ENSAPLG00000005115	LSM8	91	94.444	ENSJJAG00000009031	Lsm8	93	94.444	Jaculus_jaculus
ENSAPLG00000005115	LSM8	95	89.362	ENSKMAG00000018983	lsm8	95	89.362	Kryptolebias_marmoratus
ENSAPLG00000005115	LSM8	100	85.859	ENSLACG00000010231	LSM8	94	93.333	Latimeria_chalumnae
ENSAPLG00000005115	LSM8	100	86.869	ENSLOCG00000015580	lsm8	100	86.869	Lepisosteus_oculatus
ENSAPLG00000005115	LSM8	95	91.489	ENSLAFG00000011242	LSM8	95	91.489	Loxodonta_africana
ENSAPLG00000005115	LSM8	95	91.489	ENSMFAG00000035798	LSM8	100	95.946	Macaca_fascicularis
ENSAPLG00000005115	LSM8	95	88.298	ENSMFAG00000013044	-	95	88.298	Macaca_fascicularis
ENSAPLG00000005115	LSM8	95	91.489	ENSMMUG00000046401	LSM8	100	95.946	Macaca_mulatta
ENSAPLG00000005115	LSM8	95	91.489	ENSMNEG00000036764	-	100	95.946	Macaca_nemestrina
ENSAPLG00000005115	LSM8	76	94.667	ENSMNEG00000011141	-	100	94.667	Macaca_nemestrina
ENSAPLG00000005115	LSM8	95	76.596	ENSMLEG00000039324	-	94	76.596	Mandrillus_leucophaeus
ENSAPLG00000005115	LSM8	95	91.489	ENSMLEG00000035828	-	100	95.946	Mandrillus_leucophaeus
ENSAPLG00000005115	LSM8	76	98.667	ENSMAMG00000018839	lsm8	100	98.667	Mastacembelus_armatus
ENSAPLG00000005115	LSM8	95	89.362	ENSMZEG00005019138	lsm8	95	89.362	Maylandia_zebra
ENSAPLG00000005115	LSM8	91	95.556	ENSMGAG00000008808	LSM8	94	95.556	Meleagris_gallopavo
ENSAPLG00000005115	LSM8	91	87.778	ENSMAUG00000015721	-	94	87.778	Mesocricetus_auratus
ENSAPLG00000005115	LSM8	91	76.667	ENSMAUG00000015356	-	93	76.667	Mesocricetus_auratus
ENSAPLG00000005115	LSM8	73	91.667	ENSMAUG00000020287	-	100	89.189	Mesocricetus_auratus
ENSAPLG00000005115	LSM8	95	91.489	ENSMICG00000042730	LSM8	95	91.489	Microcebus_murinus
ENSAPLG00000005115	LSM8	95	91.489	ENSMOCG00000001688	Lsm8	95	91.489	Microtus_ochrogaster
ENSAPLG00000005115	LSM8	76	98.667	ENSMMOG00000006046	lsm8	100	98.667	Mola_mola
ENSAPLG00000005115	LSM8	74	86.667	ENSMODG00000015729	LSM8	96	86.667	Monodelphis_domestica
ENSAPLG00000005115	LSM8	100	86.869	ENSMALG00000000405	lsm8	100	86.869	Monopterus_albus
ENSAPLG00000005115	LSM8	95	91.489	MGP_CAROLIEiJ_G0028125	-	95	91.489	Mus_caroli
ENSAPLG00000005115	LSM8	95	91.489	ENSMUSG00000044155	Lsm8	95	91.489	Mus_musculus
ENSAPLG00000005115	LSM8	95	91.489	MGP_PahariEiJ_G0021881	Lsm8	100	98.667	Mus_pahari
ENSAPLG00000005115	LSM8	95	91.489	MGP_SPRETEiJ_G0029125	-	95	91.489	Mus_spretus
ENSAPLG00000005115	LSM8	95	90.426	ENSMLUG00000027762	-	95	90.426	Myotis_lucifugus
ENSAPLG00000005115	LSM8	95	91.489	ENSMLUG00000006837	-	95	91.489	Myotis_lucifugus
ENSAPLG00000005115	LSM8	95	91.489	ENSNGAG00000016554	Lsm8	95	91.489	Nannospalax_galili
ENSAPLG00000005115	LSM8	95	89.362	ENSNBRG00000014441	lsm8	95	89.362	Neolamprologus_brichardi
ENSAPLG00000005115	LSM8	95	91.489	ENSNLEG00000011768	LSM8	95	91.489	Nomascus_leucogenys
ENSAPLG00000005115	LSM8	91	82.222	ENSMEUG00000007801	LSM8	94	82.222	Notamacropus_eugenii
ENSAPLG00000005115	LSM8	86	98.824	ENSOPRG00000014809	LSM8	100	98.824	Ochotona_princeps
ENSAPLG00000005115	LSM8	81	80.000	ENSODEG00000020290	-	93	80.000	Octodon_degus
ENSAPLG00000005115	LSM8	95	91.489	ENSODEG00000000418	-	95	91.489	Octodon_degus
ENSAPLG00000005115	LSM8	95	92.553	ENSOANG00000014536	LSM8	95	92.553	Ornithorhynchus_anatinus
ENSAPLG00000005115	LSM8	95	91.489	ENSOCUG00000017359	LSM8	95	91.489	Oryctolagus_cuniculus
ENSAPLG00000005115	LSM8	100	77.778	ENSORLG00000017432	lsm8	100	77.778	Oryzias_latipes
ENSAPLG00000005115	LSM8	100	77.778	ENSORLG00020004376	lsm8	100	77.778	Oryzias_latipes_hni
ENSAPLG00000005115	LSM8	95	89.362	ENSORLG00015003757	lsm8	95	89.362	Oryzias_latipes_hsok
ENSAPLG00000005115	LSM8	70	98.551	ENSOMEG00000022509	lsm8	83	94.667	Oryzias_melastigma
ENSAPLG00000005115	LSM8	95	91.489	ENSOGAG00000013377	LSM8	95	91.489	Otolemur_garnettii
ENSAPLG00000005115	LSM8	95	91.489	ENSOARG00000017974	LSM8	95	91.489	Ovis_aries
ENSAPLG00000005115	LSM8	76	98.667	ENSPPAG00000043228	-	100	98.667	Pan_paniscus
ENSAPLG00000005115	LSM8	95	91.489	ENSPPRG00000006444	LSM8	95	91.489	Panthera_pardus
ENSAPLG00000005115	LSM8	95	91.489	ENSPTIG00000004722	LSM8	95	91.489	Panthera_tigris_altaica
ENSAPLG00000005115	LSM8	76	98.667	ENSPTRG00000046596	-	100	98.667	Pan_troglodytes
ENSAPLG00000005115	LSM8	95	91.489	ENSPANG00000035470	-	100	95.946	Papio_anubis
ENSAPLG00000005115	LSM8	91	90.000	ENSPANG00000019395	-	94	90.000	Papio_anubis
ENSAPLG00000005115	LSM8	88	98.851	ENSPKIG00000006092	lsm8	88	98.851	Paramormyrops_kingsleyae
ENSAPLG00000005115	LSM8	76	98.667	ENSPSIG00000017054	LSM8	100	98.667	Pelodiscus_sinensis
ENSAPLG00000005115	LSM8	76	98.667	ENSPMGG00000016442	lsm8	100	98.667	Periophthalmus_magnuspinnatus
ENSAPLG00000005115	LSM8	75	95.946	ENSPEMG00000009153	Lsm8	100	95.946	Peromyscus_maniculatus_bairdii
ENSAPLG00000005115	LSM8	92	92.308	ENSPCIG00000021467	LSM8	93	92.308	Phascolarctos_cinereus
ENSAPLG00000005115	LSM8	100	84.848	ENSPFOG00000012340	lsm8	100	84.848	Poecilia_formosa
ENSAPLG00000005115	LSM8	87	95.349	ENSPLAG00000000516	lsm8	90	95.349	Poecilia_latipinna
ENSAPLG00000005115	LSM8	100	84.848	ENSPMEG00000022567	lsm8	100	84.848	Poecilia_mexicana
ENSAPLG00000005115	LSM8	74	86.250	ENSPREG00000005527	lsm8	72	86.250	Poecilia_reticulata
ENSAPLG00000005115	LSM8	95	91.489	ENSPPYG00000017942	LSM8	95	91.489	Pongo_abelii
ENSAPLG00000005115	LSM8	83	78.049	ENSPCOG00000017982	-	84	78.049	Propithecus_coquereli
ENSAPLG00000005115	LSM8	95	91.489	ENSPCOG00000003309	-	95	91.489	Propithecus_coquereli
ENSAPLG00000005115	LSM8	86	97.647	ENSPVAG00000000990	LSM8	100	97.647	Pteropus_vampyrus
ENSAPLG00000005115	LSM8	95	89.362	ENSPNYG00000011448	lsm8	95	89.362	Pundamilia_nyererei
ENSAPLG00000005115	LSM8	95	91.489	ENSPNAG00000010252	lsm8	95	91.489	Pygocentrus_nattereri
ENSAPLG00000005115	LSM8	95	91.489	ENSRNOG00000058677	Lsm8	95	91.489	Rattus_norvegicus
ENSAPLG00000005115	LSM8	95	91.489	ENSRBIG00000032851	LSM8	100	95.946	Rhinopithecus_bieti
ENSAPLG00000005115	LSM8	95	91.489	ENSRROG00000039618	LSM8	100	95.946	Rhinopithecus_roxellana
ENSAPLG00000005115	LSM8	95	91.489	ENSSBOG00000023223	LSM8	100	95.946	Saimiri_boliviensis_boliviensis
ENSAPLG00000005115	LSM8	95	91.489	ENSSHAG00000018435	-	95	91.489	Sarcophilus_harrisii
ENSAPLG00000005115	LSM8	95	88.298	ENSSFOG00015004412	lsm8	95	88.298	Scleropages_formosus
ENSAPLG00000005115	LSM8	76	96.000	ENSSMAG00000009458	lsm8	100	96.000	Scophthalmus_maximus
ENSAPLG00000005115	LSM8	95	89.362	ENSSDUG00000014702	lsm8	95	89.362	Seriola_dumerili
ENSAPLG00000005115	LSM8	76	98.667	ENSSLDG00000016870	lsm8	100	98.667	Seriola_lalandi_dorsalis
ENSAPLG00000005115	LSM8	73	98.611	ENSSARG00000009628	-	100	98.611	Sorex_araneus
ENSAPLG00000005115	LSM8	95	91.489	ENSSPUG00000017419	LSM8	95	91.489	Sphenodon_punctatus
ENSAPLG00000005115	LSM8	95	89.362	ENSSPAG00000021422	lsm8	95	89.362	Stegastes_partitus
ENSAPLG00000005115	LSM8	95	91.489	ENSSSCG00000021652	LSM8	95	91.489	Sus_scrofa
ENSAPLG00000005115	LSM8	95	92.553	ENSTGUG00000004730	-	95	92.553	Taeniopygia_guttata
ENSAPLG00000005115	LSM8	95	91.489	ENSTGUG00000016823	-	95	91.489	Taeniopygia_guttata
ENSAPLG00000005115	LSM8	95	89.362	ENSTRUG00000025192	lsm8	95	89.362	Takifugu_rubripes
ENSAPLG00000005115	LSM8	95	89.362	ENSTNIG00000002864	lsm8	95	89.362	Tetraodon_nigroviridis
ENSAPLG00000005115	LSM8	95	91.489	ENSTTRG00000001023	LSM8	95	91.489	Tursiops_truncatus
ENSAPLG00000005115	LSM8	92	94.505	ENSUAMG00000006943	-	95	94.505	Ursus_americanus
ENSAPLG00000005115	LSM8	92	94.505	ENSUMAG00000003073	LSM8	97	94.505	Ursus_maritimus
ENSAPLG00000005115	LSM8	95	91.489	ENSVPAG00000001530	LSM8	95	91.489	Vicugna_pacos
ENSAPLG00000005115	LSM8	76	96.000	ENSVVUG00000013248	-	82	96.000	Vulpes_vulpes
ENSAPLG00000005115	LSM8	86	98.824	ENSXETG00000021829	lsm8	88	98.824	Xenopus_tropicalis
ENSAPLG00000005115	LSM8	100	83.838	ENSXCOG00000012938	lsm8	100	83.838	Xiphophorus_couchianus
ENSAPLG00000005115	LSM8	100	84.848	ENSXMAG00000025919	lsm8	100	84.848	Xiphophorus_maculatus