EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000005341 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 31419 bases
Position: chrKB742446.1:771011-802429
Accession: 101791891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000004929	zf-CCCH	PF00642.24	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000005553	RC3H1-201	3999	XM_005009873	ENSAPLP00000004929	1141 (aa)	-	U3ICF7

Gene Model

Click here to download ENSAPLG00000005341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000005341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000005341	RC3H1	98	50.212	ENSAPLG00000013920	RC3H2	94	50.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000005341	RC3H1	100	88.056	ENSG00000135870	RC3H1	100	88.056	Homo_sapiens
ENSAPLG00000005341	RC3H1	100	87.773	ENSAMEG00000015657	RC3H1	100	88.307	Ailuropoda_melanoleuca
ENSAPLG00000005341	RC3H1	100	86.000	ENSACAG00000015271	RC3H1	100	85.913	Anolis_carolinensis
ENSAPLG00000005341	RC3H1	100	88.056	ENSANAG00000036716	RC3H1	100	88.143	Aotus_nancymaae
ENSAPLG00000005341	RC3H1	100	86.736	ENSBTAG00000052708	RC3H1	100	87.271	Bos_taurus
ENSAPLG00000005341	RC3H1	100	87.794	ENSCJAG00000009106	RC3H1	100	87.881	Callithrix_jacchus
ENSAPLG00000005341	RC3H1	100	87.511	ENSCAFG00000014434	RC3H1	100	88.045	Canis_familiaris
ENSAPLG00000005341	RC3H1	100	87.435	ENSCAFG00020017112	RC3H1	99	96.875	Canis_lupus_dingo
ENSAPLG00000005341	RC3H1	100	86.987	ENSCHIG00000002873	RC3H1	100	87.522	Capra_hircus
ENSAPLG00000005341	RC3H1	99	86.463	ENSTSYG00000003913	RC3H1	99	86.911	Carlito_syrichta
ENSAPLG00000005341	RC3H1	100	84.367	ENSCPOG00000004349	RC3H1	100	84.367	Cavia_porcellus
ENSAPLG00000005341	RC3H1	100	86.574	ENSCCAG00000025652	RC3H1	100	86.661	Cebus_capucinus
ENSAPLG00000005341	RC3H1	100	88.492	ENSCATG00000033497	RC3H1	100	88.492	Cercocebus_atys
ENSAPLG00000005341	RC3H1	100	86.126	ENSCLAG00000011267	RC3H1	100	86.387	Chinchilla_lanigera
ENSAPLG00000005341	RC3H1	96	88.595	ENSCSAG00000011823	RC3H1	84	88.595	Chlorocebus_sabaeus
ENSAPLG00000005341	RC3H1	100	90.061	ENSCPBG00000014670	RC3H1	100	95.896	Chrysemys_picta_bellii
ENSAPLG00000005341	RC3H1	100	88.579	ENSCANG00000032120	RC3H1	100	88.579	Colobus_angolensis_palliatus
ENSAPLG00000005341	RC3H1	100	85.752	ENSCGRG00001020812	Rc3h1	100	86.288	Cricetulus_griseus_chok1gshd
ENSAPLG00000005341	RC3H1	100	85.752	ENSCGRG00000011952	Rc3h1	100	86.288	Cricetulus_griseus_crigri
ENSAPLG00000005341	RC3H1	55	82.120	ENSDNOG00000011494	RC3H1	99	82.120	Dasypus_novemcinctus
ENSAPLG00000005341	RC3H1	100	86.026	ENSDORG00000004855	Rc3h1	100	86.736	Dipodomys_ordii
ENSAPLG00000005341	RC3H1	81	87.262	ENSETEG00000012064	RC3H1	87	88.081	Echinops_telfairi
ENSAPLG00000005341	RC3H1	100	86.114	ENSEASG00005017000	RC3H1	100	86.649	Equus_asinus_asinus
ENSAPLG00000005341	RC3H1	100	85.939	ENSECAG00000021208	RC3H1	100	86.475	Equus_caballus
ENSAPLG00000005341	RC3H1	84	80.812	ENSEEUG00000014861	RC3H1	88	80.812	Erinaceus_europaeus
ENSAPLG00000005341	RC3H1	100	88.133	ENSFCAG00000014924	RC3H1	100	88.666	Felis_catus
ENSAPLG00000005341	RC3H1	100	94.415	ENSFALG00000002947	RC3H1	100	94.415	Ficedula_albicollis
ENSAPLG00000005341	RC3H1	100	86.911	ENSFDAG00000013303	RC3H1	100	86.911	Fukomys_damarensis
ENSAPLG00000005341	RC3H1	100	95.443	ENSGALG00000004587	RC3H1	100	95.443	Gallus_gallus
ENSAPLG00000005341	RC3H1	93	96.112	ENSGAGG00000018194	RC3H1	100	96.112	Gopherus_agassizii
ENSAPLG00000005341	RC3H1	100	81.929	ENSGGOG00000005735	RC3H1	100	81.929	Gorilla_gorilla
ENSAPLG00000005341	RC3H1	89	82.119	ENSHGLG00000004183	-	100	82.119	Heterocephalus_glaber_female
ENSAPLG00000005341	RC3H1	100	86.126	ENSHGLG00100008577	RC3H1	100	86.126	Heterocephalus_glaber_male
ENSAPLG00000005341	RC3H1	100	86.900	ENSSTOG00000016033	RC3H1	100	87.260	Ictidomys_tridecemlineatus
ENSAPLG00000005341	RC3H1	100	85.939	ENSJJAG00000018915	Rc3h1	100	86.475	Jaculus_jaculus
ENSAPLG00000005341	RC3H1	100	73.947	ENSLACG00000016186	RC3H1	100	77.339	Latimeria_chalumnae
ENSAPLG00000005341	RC3H1	97	88.368	ENSLAFG00000004367	RC3H1	99	88.919	Loxodonta_africana
ENSAPLG00000005341	RC3H1	100	88.317	ENSMFAG00000033725	RC3H1	100	88.317	Macaca_fascicularis
ENSAPLG00000005341	RC3H1	100	88.317	ENSMMUG00000000630	RC3H1	100	88.317	Macaca_mulatta
ENSAPLG00000005341	RC3H1	100	88.405	ENSMNEG00000035968	RC3H1	100	88.405	Macaca_nemestrina
ENSAPLG00000005341	RC3H1	100	88.492	ENSMLEG00000037455	RC3H1	100	88.492	Mandrillus_leucophaeus
ENSAPLG00000005341	RC3H1	88	85.871	ENSMAUG00000020864	Rc3h1	94	86.481	Mesocricetus_auratus
ENSAPLG00000005341	RC3H1	100	87.598	ENSMICG00000003000	RC3H1	100	88.133	Microcebus_murinus
ENSAPLG00000005341	RC3H1	93	84.067	ENSMOCG00000016587	Rc3h1	98	84.644	Microtus_ochrogaster
ENSAPLG00000005341	RC3H1	100	87.097	ENSMODG00000004289	RC3H1	100	87.631	Monodelphis_domestica
ENSAPLG00000005341	RC3H1	100	85.764	MGP_CAROLIEiJ_G0014756	Rc3h1	100	85.764	Mus_caroli
ENSAPLG00000005341	RC3H1	100	85.677	ENSMUSG00000040423	Rc3h1	100	85.677	Mus_musculus
ENSAPLG00000005341	RC3H1	100	85.939	MGP_PahariEiJ_G0027992	Rc3h1	100	85.939	Mus_pahari
ENSAPLG00000005341	RC3H1	100	85.764	MGP_SPRETEiJ_G0015563	Rc3h1	100	85.764	Mus_spretus
ENSAPLG00000005341	RC3H1	100	87.675	ENSMPUG00000004747	RC3H1	100	88.210	Mustela_putorius_furo
ENSAPLG00000005341	RC3H1	100	86.276	ENSMLUG00000011127	RC3H1	100	86.812	Myotis_lucifugus
ENSAPLG00000005341	RC3H1	100	86.538	ENSNGAG00000011135	Rc3h1	100	87.074	Nannospalax_galili
ENSAPLG00000005341	RC3H1	100	88.143	ENSNLEG00000015327	RC3H1	100	88.143	Nomascus_leucogenys
ENSAPLG00000005341	RC3H1	99	75.416	ENSOPRG00000013068	RC3H1	99	75.524	Ochotona_princeps
ENSAPLG00000005341	RC3H1	100	86.736	ENSODEG00000014185	RC3H1	100	86.736	Octodon_degus
ENSAPLG00000005341	RC3H1	100	88.042	ENSOANG00000000924	RC3H1	100	88.215	Ornithorhynchus_anatinus
ENSAPLG00000005341	RC3H1	99	87.068	ENSOCUG00000004930	RC3H1	98	87.611	Oryctolagus_cuniculus
ENSAPLG00000005341	RC3H1	100	80.820	ENSOGAG00000004044	RC3H1	100	81.359	Otolemur_garnettii
ENSAPLG00000005341	RC3H1	100	87.728	ENSOARG00000013011	RC3H1	100	88.261	Ovis_aries
ENSAPLG00000005341	RC3H1	100	88.230	ENSPPAG00000039253	RC3H1	100	88.230	Pan_paniscus
ENSAPLG00000005341	RC3H1	100	87.424	ENSPPRG00000009007	RC3H1	100	87.958	Panthera_pardus
ENSAPLG00000005341	RC3H1	100	87.652	ENSPTIG00000015326	RC3H1	100	88.184	Panthera_tigris_altaica
ENSAPLG00000005341	RC3H1	100	88.230	ENSPTRG00000001702	RC3H1	100	88.230	Pan_troglodytes
ENSAPLG00000005341	RC3H1	100	88.317	ENSPANG00000008886	RC3H1	100	88.317	Papio_anubis
ENSAPLG00000005341	RC3H1	100	89.538	ENSPSIG00000016181	RC3H1	100	89.538	Pelodiscus_sinensis
ENSAPLG00000005341	RC3H1	100	85.664	ENSPEMG00000011966	Rc3h1	100	85.839	Peromyscus_maniculatus_bairdii
ENSAPLG00000005341	RC3H1	71	87.886	ENSPCIG00000002058	RC3H1	95	97.550	Phascolarctos_cinereus
ENSAPLG00000005341	RC3H1	100	85.615	ENSPPYG00000000490	RC3H1	98	88.019	Pongo_abelii
ENSAPLG00000005341	RC3H1	81	94.737	ENSPCAG00000010775	RC3H1	87	94.737	Procavia_capensis
ENSAPLG00000005341	RC3H1	83	85.549	ENSPCOG00000021795	RC3H1	96	86.196	Propithecus_coquereli
ENSAPLG00000005341	RC3H1	100	79.476	ENSPVAG00000007593	RC3H1	100	80.192	Pteropus_vampyrus
ENSAPLG00000005341	RC3H1	97	60.873	ENSPNAG00000023439	rc3h1a	95	90.380	Pygocentrus_nattereri
ENSAPLG00000005341	RC3H1	100	88.492	ENSRBIG00000037743	RC3H1	100	88.492	Rhinopithecus_bieti
ENSAPLG00000005341	RC3H1	100	88.230	ENSRROG00000036546	RC3H1	100	88.230	Rhinopithecus_roxellana
ENSAPLG00000005341	RC3H1	93	79.310	ENSSBOG00000010664	RC3H1	100	81.946	Saimiri_boliviensis_boliviensis
ENSAPLG00000005341	RC3H1	100	86.585	ENSSHAG00000007589	RC3H1	100	86.672	Sarcophilus_harrisii
ENSAPLG00000005341	RC3H1	87	85.906	ENSSARG00000004660	RC3H1	86	85.906	Sorex_araneus
ENSAPLG00000005341	RC3H1	100	85.963	ENSSPUG00000018472	RC3H1	100	85.876	Sphenodon_punctatus
ENSAPLG00000005341	RC3H1	100	87.860	ENSSSCG00000015498	RC3H1	100	88.394	Sus_scrofa
ENSAPLG00000005341	RC3H1	100	94.138	ENSTGUG00000004090	RC3H1	100	94.046	Taeniopygia_guttata
ENSAPLG00000005341	RC3H1	93	84.365	ENSTBEG00000005015	RC3H1	93	84.924	Tupaia_belangeri
ENSAPLG00000005341	RC3H1	100	87.108	ENSTTRG00000008572	RC3H1	100	87.641	Tursiops_truncatus
ENSAPLG00000005341	RC3H1	100	87.074	ENSUAMG00000019525	RC3H1	100	87.609	Ursus_americanus
ENSAPLG00000005341	RC3H1	100	87.773	ENSUMAG00000020087	RC3H1	100	88.307	Ursus_maritimus
ENSAPLG00000005341	RC3H1	91	97.315	ENSVPAG00000002591	RC3H1	92	97.315	Vicugna_pacos
ENSAPLG00000005341	RC3H1	100	87.380	ENSVVUG00000014201	RC3H1	93	95.604	Vulpes_vulpes
ENSAPLG00000005341	RC3H1	100	78.182	ENSXETG00000020030	rc3h1	100	78.095	Xenopus_tropicalis