EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000005456 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 54842 bases
Position: chrKB743105.1:86374-141215
Accession: 101804378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000005040	Ago_hook	PF10427.9	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000005667	TNRC6C-201	5736	XM_005019622	ENSAPLP00000005040	1911 (aa)	-	U3ICR8

Gene Model

Click here to download ENSAPLG00000005456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000005456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000005456	TNRC6C	96	40.476	ENSAPLG00000009347	TNRC6B	99	40.752
ENSAPLG00000005456	TNRC6C	99	46.219	ENSAPLG00000009978	TNRC6A	99	45.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000005456	TNRC6C	100	86.577	ENSG00000078687	TNRC6C	100	90.526	Homo_sapiens
ENSAPLG00000005456	TNRC6C	73	53.430	ENSAPOG00000019749	tnrc6c1	98	49.816	Acanthochromis_polyacanthus
ENSAPLG00000005456	TNRC6C	94	87.209	ENSAMEG00000013756	TNRC6C	100	87.431	Ailuropoda_melanoleuca
ENSAPLG00000005456	TNRC6C	89	51.967	ENSACIG00000008075	tnrc6c1	98	54.812	Amphilophus_citrinellus
ENSAPLG00000005456	TNRC6C	71	64.618	ENSAOCG00000023968	tnrc6c1	95	66.020	Amphiprion_ocellaris
ENSAPLG00000005456	TNRC6C	73	53.727	ENSAPEG00000009020	tnrc6c1	95	66.020	Amphiprion_percula
ENSAPLG00000005456	TNRC6C	100	91.169	ENSACAG00000016198	TNRC6C	98	91.259	Anolis_carolinensis
ENSAPLG00000005456	TNRC6C	100	86.009	ENSANAG00000021554	TNRC6C	99	86.150	Aotus_nancymaae
ENSAPLG00000005456	TNRC6C	94	47.856	ENSACLG00000000424	tnrc6c1	99	53.154	Astatotilapia_calliptera
ENSAPLG00000005456	TNRC6C	100	83.247	ENSBTAG00000018658	TNRC6C	100	83.963	Bos_taurus
ENSAPLG00000005456	TNRC6C	100	85.958	ENSCJAG00000019431	TNRC6C	99	86.047	Callithrix_jacchus
ENSAPLG00000005456	TNRC6C	100	86.092	ENSCAFG00000005224	TNRC6C	99	86.085	Canis_familiaris
ENSAPLG00000005456	TNRC6C	100	85.633	ENSCAFG00020006661	TNRC6C	99	85.626	Canis_lupus_dingo
ENSAPLG00000005456	TNRC6C	100	82.909	ENSCHIG00000026004	TNRC6C	100	83.247	Capra_hircus
ENSAPLG00000005456	TNRC6C	90	87.171	ENSTSYG00000005403	TNRC6C	100	87.271	Carlito_syrichta
ENSAPLG00000005456	TNRC6C	99	77.692	ENSCAPG00000007307	TNRC6C	99	78.031	Cavia_aperea
ENSAPLG00000005456	TNRC6C	100	82.210	ENSCPOG00000000467	TNRC6C	100	83.110	Cavia_porcellus
ENSAPLG00000005456	TNRC6C	100	86.164	ENSCCAG00000030524	TNRC6C	100	86.705	Cebus_capucinus
ENSAPLG00000005456	TNRC6C	100	86.371	ENSCATG00000033135	TNRC6C	100	86.991	Cercocebus_atys
ENSAPLG00000005456	TNRC6C	100	83.437	ENSCLAG00000011139	TNRC6C	99	83.904	Chinchilla_lanigera
ENSAPLG00000005456	TNRC6C	100	86.729	ENSCSAG00000005167	TNRC6C	99	86.819	Chlorocebus_sabaeus
ENSAPLG00000005456	TNRC6C	72	85.714	ENSCHOG00000000088	TNRC6C	75	85.714	Choloepus_hoffmanni
ENSAPLG00000005456	TNRC6C	94	90.859	ENSCPBG00000027960	TNRC6C	100	90.805	Chrysemys_picta_bellii
ENSAPLG00000005456	TNRC6C	100	86.113	ENSCANG00000041771	TNRC6C	100	86.648	Colobus_angolensis_palliatus
ENSAPLG00000005456	TNRC6C	100	80.982	ENSCGRG00001022686	Tnrc6c	100	80.662	Cricetulus_griseus_chok1gshd
ENSAPLG00000005456	TNRC6C	100	81.318	ENSCGRG00000018041	Tnrc6c	100	80.662	Cricetulus_griseus_crigri
ENSAPLG00000005456	TNRC6C	98	46.360	ENSCSEG00000012744	tnrc6c1	98	47.265	Cynoglossus_semilaevis
ENSAPLG00000005456	TNRC6C	97	51.662	ENSDARG00000076847	tnrc6c1	99	54.520	Danio_rerio
ENSAPLG00000005456	TNRC6C	100	84.647	ENSDNOG00000003247	TNRC6C	99	85.062	Dasypus_novemcinctus
ENSAPLG00000005456	TNRC6C	99	78.686	ENSDORG00000004558	Tnrc6c	100	79.053	Dipodomys_ordii
ENSAPLG00000005456	TNRC6C	84	74.793	ENSETEG00000005527	TNRC6C	90	74.793	Echinops_telfairi
ENSAPLG00000005456	TNRC6C	90	84.223	ENSEASG00005004799	TNRC6C	100	84.567	Equus_asinus_asinus
ENSAPLG00000005456	TNRC6C	100	85.714	ENSECAG00000012486	TNRC6C	99	85.714	Equus_caballus
ENSAPLG00000005456	TNRC6C	90	87.986	ENSEEUG00000010008	TNRC6C	96	87.986	Erinaceus_europaeus
ENSAPLG00000005456	TNRC6C	100	83.626	ENSFCAG00000028358	TNRC6C	99	83.678	Felis_catus
ENSAPLG00000005456	TNRC6C	90	93.871	ENSFALG00000000848	TNRC6C	100	93.871	Ficedula_albicollis
ENSAPLG00000005456	TNRC6C	93	83.630	ENSFDAG00000010368	TNRC6C	100	84.225	Fukomys_damarensis
ENSAPLG00000005456	TNRC6C	98	48.243	ENSFHEG00000002936	tnrc6c1	99	46.752	Fundulus_heteroclitus
ENSAPLG00000005456	TNRC6C	94	95.854	ENSGALG00000001725	TNRC6C	99	95.854	Gallus_gallus
ENSAPLG00000005456	TNRC6C	99	48.654	ENSGAFG00000019019	tnrc6c1	99	48.405	Gambusia_affinis
ENSAPLG00000005456	TNRC6C	71	53.070	ENSGACG00000012320	tnrc6c1	97	47.813	Gasterosteus_aculeatus
ENSAPLG00000005456	TNRC6C	94	91.976	ENSGAGG00000022043	TNRC6C	99	92.342	Gopherus_agassizii
ENSAPLG00000005456	TNRC6C	100	86.164	ENSGGOG00000011304	TNRC6C	100	86.418	Gorilla_gorilla
ENSAPLG00000005456	TNRC6C	99	45.992	ENSHBUG00000010846	tnrc6c1	99	53.150	Haplochromis_burtoni
ENSAPLG00000005456	TNRC6C	100	83.307	ENSHGLG00000004809	TNRC6C	99	83.705	Heterocephalus_glaber_female
ENSAPLG00000005456	TNRC6C	100	82.550	ENSHGLG00100012597	TNRC6C	99	83.204	Heterocephalus_glaber_male
ENSAPLG00000005456	TNRC6C	99	51.233	ENSIPUG00000000818	tnrc6c1	98	51.828	Ictalurus_punctatus
ENSAPLG00000005456	TNRC6C	100	82.654	ENSSTOG00000009101	TNRC6C	100	83.686	Ictidomys_tridecemlineatus
ENSAPLG00000005456	TNRC6C	100	80.712	ENSJJAG00000017055	Tnrc6c	99	80.692	Jaculus_jaculus
ENSAPLG00000005456	TNRC6C	99	48.884	ENSKMAG00000021023	tnrc6c1	97	50.581	Kryptolebias_marmoratus
ENSAPLG00000005456	TNRC6C	87	80.428	ENSLACG00000015283	TNRC6C	96	80.027	Latimeria_chalumnae
ENSAPLG00000005456	TNRC6C	99	73.266	ENSLOCG00000013377	tnrc6c1	94	73.313	Lepisosteus_oculatus
ENSAPLG00000005456	TNRC6C	100	83.929	ENSLAFG00000011122	TNRC6C	99	84.275	Loxodonta_africana
ENSAPLG00000005456	TNRC6C	100	86.474	ENSMFAG00000043943	TNRC6C	100	87.049	Macaca_fascicularis
ENSAPLG00000005456	TNRC6C	100	86.833	ENSMMUG00000011924	TNRC6C	100	84.611	Macaca_mulatta
ENSAPLG00000005456	TNRC6C	100	86.474	ENSMNEG00000030405	TNRC6C	99	86.563	Macaca_nemestrina
ENSAPLG00000005456	TNRC6C	100	86.474	ENSMLEG00000033436	TNRC6C	100	87.049	Mandrillus_leucophaeus
ENSAPLG00000005456	TNRC6C	85	53.920	ENSMAMG00000023613	tnrc6c1	100	51.077	Mastacembelus_armatus
ENSAPLG00000005456	TNRC6C	99	47.093	ENSMZEG00005010920	tnrc6c1	99	53.154	Maylandia_zebra
ENSAPLG00000005456	TNRC6C	100	89.916	ENSMGAG00000003906	TNRC6C	100	89.916	Meleagris_gallopavo
ENSAPLG00000005456	TNRC6C	90	81.699	ENSMAUG00000021618	Tnrc6c	100	81.803	Mesocricetus_auratus
ENSAPLG00000005456	TNRC6C	100	86.784	ENSMICG00000003952	TNRC6C	100	87.156	Microcebus_murinus
ENSAPLG00000005456	TNRC6C	100	82.636	ENSMOCG00000015879	Tnrc6c	100	83.398	Microtus_ochrogaster
ENSAPLG00000005456	TNRC6C	71	54.225	ENSMMOG00000005203	tnrc6c1	97	50.227	Mola_mola
ENSAPLG00000005456	TNRC6C	100	85.434	ENSMODG00000001785	TNRC6C	99	84.969	Monodelphis_domestica
ENSAPLG00000005456	TNRC6C	100	82.086	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	83.120	Mus_caroli
ENSAPLG00000005456	TNRC6C	100	81.724	ENSMUSG00000025571	Tnrc6c	100	82.563	Mus_musculus
ENSAPLG00000005456	TNRC6C	100	82.034	MGP_PahariEiJ_G0018593	Tnrc6c	100	82.897	Mus_pahari
ENSAPLG00000005456	TNRC6C	100	81.776	MGP_SPRETEiJ_G0018309	Tnrc6c	100	82.618	Mus_spretus
ENSAPLG00000005456	TNRC6C	100	83.992	ENSMPUG00000013348	TNRC6C	97	83.940	Mustela_putorius_furo
ENSAPLG00000005456	TNRC6C	100	79.065	ENSMLUG00000014431	TNRC6C	97	79.481	Myotis_lucifugus
ENSAPLG00000005456	TNRC6C	100	82.025	ENSNGAG00000012203	Tnrc6c	99	82.110	Nannospalax_galili
ENSAPLG00000005456	TNRC6C	94	48.787	ENSNBRG00000005344	tnrc6c1	99	54.206	Neolamprologus_brichardi
ENSAPLG00000005456	TNRC6C	99	84.341	ENSNLEG00000000047	TNRC6C	99	84.377	Nomascus_leucogenys
ENSAPLG00000005456	TNRC6C	91	79.738	ENSMEUG00000005104	TNRC6C	100	79.340	Notamacropus_eugenii
ENSAPLG00000005456	TNRC6C	90	83.658	ENSODEG00000012499	TNRC6C	100	84.346	Octodon_degus
ENSAPLG00000005456	TNRC6C	85	49.646	ENSONIG00000002210	tnrc6c1	97	54.678	Oreochromis_niloticus
ENSAPLG00000005456	TNRC6C	100	61.609	ENSOANG00000009758	-	100	62.057	Ornithorhynchus_anatinus
ENSAPLG00000005456	TNRC6C	94	45.913	ENSORLG00000009837	tnrc6c1	100	69.742	Oryzias_latipes
ENSAPLG00000005456	TNRC6C	94	47.089	ENSORLG00020016510	tnrc6c1	100	48.411	Oryzias_latipes_hni
ENSAPLG00000005456	TNRC6C	75	42.221	ENSORLG00015000171	tnrc6c1	98	43.208	Oryzias_latipes_hsok
ENSAPLG00000005456	TNRC6C	90	85.395	ENSOGAG00000007197	TNRC6C	100	85.493	Otolemur_garnettii
ENSAPLG00000005456	TNRC6C	96	79.849	ENSOARG00000006041	TNRC6C	97	80.389	Ovis_aries
ENSAPLG00000005456	TNRC6C	100	86.422	ENSPPAG00000027160	TNRC6C	100	86.934	Pan_paniscus
ENSAPLG00000005456	TNRC6C	100	83.626	ENSPPRG00000018881	TNRC6C	99	83.678	Panthera_pardus
ENSAPLG00000005456	TNRC6C	90	83.243	ENSPTIG00000008791	TNRC6C	91	83.289	Panthera_tigris_altaica
ENSAPLG00000005456	TNRC6C	100	86.577	ENSPTRG00000009699	TNRC6C	100	87.049	Pan_troglodytes
ENSAPLG00000005456	TNRC6C	100	86.474	ENSPANG00000019994	TNRC6C	99	86.563	Papio_anubis
ENSAPLG00000005456	TNRC6C	87	52.934	ENSPKIG00000005428	tnrc6c1	98	53.144	Paramormyrops_kingsleyae
ENSAPLG00000005456	TNRC6C	93	88.176	ENSPSIG00000018069	TNRC6C	100	88.232	Pelodiscus_sinensis
ENSAPLG00000005456	TNRC6C	59	58.613	ENSPMGG00000022911	tnrc6c1	97	65.714	Periophthalmus_magnuspinnatus
ENSAPLG00000005456	TNRC6C	100	82.171	ENSPEMG00000009785	Tnrc6c	99	82.429	Peromyscus_maniculatus_bairdii
ENSAPLG00000005456	TNRC6C	51	84.435	ENSPCIG00000017421	-	99	84.334	Phascolarctos_cinereus
ENSAPLG00000005456	TNRC6C	98	48.465	ENSPFOG00000012560	tnrc6c1	97	57.829	Poecilia_formosa
ENSAPLG00000005456	TNRC6C	88	50.489	ENSPLAG00000021055	tnrc6c1	97	50.977	Poecilia_latipinna
ENSAPLG00000005456	TNRC6C	100	86.936	ENSPPYG00000008679	TNRC6C	97	87.026	Pongo_abelii
ENSAPLG00000005456	TNRC6C	83	88.106	ENSPCAG00000012510	TNRC6C	91	88.462	Procavia_capensis
ENSAPLG00000005456	TNRC6C	90	87.350	ENSPCOG00000021451	TNRC6C	100	87.450	Propithecus_coquereli
ENSAPLG00000005456	TNRC6C	89	88.136	ENSPVAG00000002008	TNRC6C	96	88.136	Pteropus_vampyrus
ENSAPLG00000005456	TNRC6C	94	47.512	ENSPNYG00000014477	tnrc6c1	99	52.724	Pundamilia_nyererei
ENSAPLG00000005456	TNRC6C	90	82.104	ENSRNOG00000022395	Tnrc6c	100	82.427	Rattus_norvegicus
ENSAPLG00000005456	TNRC6C	100	86.422	ENSRBIG00000027777	TNRC6C	100	86.991	Rhinopithecus_bieti
ENSAPLG00000005456	TNRC6C	100	86.474	ENSRROG00000042912	TNRC6C	100	87.049	Rhinopithecus_roxellana
ENSAPLG00000005456	TNRC6C	100	85.854	ENSSBOG00000023981	TNRC6C	100	86.246	Saimiri_boliviensis_boliviensis
ENSAPLG00000005456	TNRC6C	93	58.085	ENSSFOG00015006475	tnrc6c1	94	67.427	Scleropages_formosus
ENSAPLG00000005456	TNRC6C	74	56.308	ENSSFOG00015004735	-	99	60.891	Scleropages_formosus
ENSAPLG00000005456	TNRC6C	94	46.605	ENSSMAG00000012761	tnrc6c1	99	49.775	Scophthalmus_maximus
ENSAPLG00000005456	TNRC6C	95	48.339	ENSSDUG00000002366	tnrc6c1	99	50.026	Seriola_dumerili
ENSAPLG00000005456	TNRC6C	85	48.339	ENSSLDG00000025613	tnrc6c1	53	63.282	Seriola_lalandi_dorsalis
ENSAPLG00000005456	TNRC6C	85	90.756	ENSSARG00000006816	TNRC6C	91	90.756	Sorex_araneus
ENSAPLG00000005456	TNRC6C	81	92.661	ENSSPUG00000007341	TNRC6C	98	92.661	Sphenodon_punctatus
ENSAPLG00000005456	TNRC6C	86	86.838	ENSSSCG00000034373	TNRC6C	100	88.122	Sus_scrofa
ENSAPLG00000005456	TNRC6C	93	92.526	ENSTGUG00000007733	TNRC6C	100	92.526	Taeniopygia_guttata
ENSAPLG00000005456	TNRC6C	71	54.123	ENSTRUG00000011685	tnrc6c1	94	61.459	Takifugu_rubripes
ENSAPLG00000005456	TNRC6C	94	52.298	ENSTNIG00000005273	tnrc6c1	100	61.331	Tetraodon_nigroviridis
ENSAPLG00000005456	TNRC6C	59	77.262	ENSTBEG00000005046	TNRC6C	95	77.143	Tupaia_belangeri
ENSAPLG00000005456	TNRC6C	93	83.695	ENSTTRG00000010828	TNRC6C	99	83.639	Tursiops_truncatus
ENSAPLG00000005456	TNRC6C	99	84.014	ENSUMAG00000013614	TNRC6C	99	84.014	Ursus_maritimus
ENSAPLG00000005456	TNRC6C	90	84.633	ENSVVUG00000015268	TNRC6C	100	84.576	Vulpes_vulpes
ENSAPLG00000005456	TNRC6C	90	73.962	ENSXETG00000019470	tnrc6c	100	73.948	Xenopus_tropicalis
ENSAPLG00000005456	TNRC6C	99	47.792	ENSXMAG00000025971	tnrc6c1	99	49.974	Xiphophorus_maculatus