EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000005780 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 15992 bases
Position: chrKB743098.1:228723-244714
Accession: 101803767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000005409	RRM_5	PF13893.6	2.2e-07	1	1
ENSAPLP00000005409	RRM_1	PF00076.22	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006039	-	2811	XM_005019530	ENSAPLP00000005409	858 (aa)	XP_021128107	U3IDT7

Gene Model

Click here to download ENSAPLG00000005780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000005780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000005780	-	96	78.546	ENSAPLG00000006355	-	100	77.950

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000005780	-	100	64.821	ENSG00000160633	SAFB	93	65.668	Homo_sapiens
ENSAPLG00000005780	-	93	46.098	ENSAPOG00000022508	safb	60	41.208	Acanthochromis_polyacanthus
ENSAPLG00000005780	-	67	61.313	ENSAMEG00000012254	SAFB	94	64.747	Ailuropoda_melanoleuca
ENSAPLG00000005780	-	97	43.743	ENSACIG00000006247	safb	93	41.570	Amphilophus_citrinellus
ENSAPLG00000005780	-	94	45.683	ENSAOCG00000006308	safb	93	43.140	Amphiprion_ocellaris
ENSAPLG00000005780	-	93	45.752	ENSAPEG00000023342	safb	60	41.519	Amphiprion_percula
ENSAPLG00000005780	-	98	45.114	ENSATEG00000004998	safb	60	40.696	Anabas_testudineus
ENSAPLG00000005780	-	100	64.821	ENSANAG00000028821	SAFB	93	65.668	Aotus_nancymaae
ENSAPLG00000005780	-	93	46.446	ENSAMXG00000018154	safb	58	43.088	Astyanax_mexicanus
ENSAPLG00000005780	-	100	63.615	ENSBTAG00000007875	SAFB	93	63.731	Bos_taurus
ENSAPLG00000005780	-	83	68.206	ENSCJAG00000017081	SAFB	99	70.018	Callithrix_jacchus
ENSAPLG00000005780	-	100	64.821	ENSCAFG00000018803	SAFB	81	66.359	Canis_familiaris
ENSAPLG00000005780	-	100	64.245	ENSCAFG00020018943	SAFB	93	66.359	Canis_lupus_dingo
ENSAPLG00000005780	-	100	63.152	ENSCHIG00000007262	SAFB	93	63.268	Capra_hircus
ENSAPLG00000005780	-	100	61.392	ENSCPOG00000026322	SAFB	94	61.279	Cavia_porcellus
ENSAPLG00000005780	-	100	64.747	ENSCCAG00000020193	SAFB	93	64.902	Cebus_capucinus
ENSAPLG00000005780	-	100	64.821	ENSCATG00000029994	SAFB	93	65.668	Cercocebus_atys
ENSAPLG00000005780	-	100	64.972	ENSCLAG00000007734	SAFB	94	63.134	Chinchilla_lanigera
ENSAPLG00000005780	-	100	64.821	ENSCSAG00000009949	SAFB	93	65.668	Chlorocebus_sabaeus
ENSAPLG00000005780	-	88	57.708	ENSCHOG00000003208	SAFB	88	59.001	Choloepus_hoffmanni
ENSAPLG00000005780	-	98	86.288	ENSCPBG00000010928	-	100	86.288	Chrysemys_picta_bellii
ENSAPLG00000005780	-	98	70.045	ENSCPBG00000010936	-	100	71.171	Chrysemys_picta_bellii
ENSAPLG00000005780	-	89	65.196	ENSCANG00000004774	-	67	63.082	Colobus_angolensis_palliatus
ENSAPLG00000005780	-	100	61.105	ENSCANG00000019754	-	93	61.954	Colobus_angolensis_palliatus
ENSAPLG00000005780	-	100	59.685	ENSCGRG00001002254	Safb	94	61.305	Cricetulus_griseus_chok1gshd
ENSAPLG00000005780	-	96	58.163	ENSCGRG00000011529	Safb	96	59.230	Cricetulus_griseus_crigri
ENSAPLG00000005780	-	97	42.312	ENSCSEG00000019870	safb	60	38.640	Cynoglossus_semilaevis
ENSAPLG00000005780	-	97	41.163	ENSCVAG00000002226	safb	59	37.852	Cyprinodon_variegatus
ENSAPLG00000005780	-	94	44.958	ENSDARG00000020467	safb	60	41.754	Danio_rerio
ENSAPLG00000005780	-	100	64.055	ENSDNOG00000015746	SAFB	95	65.309	Dasypus_novemcinctus
ENSAPLG00000005780	-	66	58.763	ENSDORG00000016200	Safb	93	56.949	Dipodomys_ordii
ENSAPLG00000005780	-	78	67.483	ENSETEG00000018679	SAFB	72	69.302	Echinops_telfairi
ENSAPLG00000005780	-	100	62.113	ENSEASG00005023019	SAFB	93	64.032	Equus_asinus_asinus
ENSAPLG00000005780	-	100	63.322	ENSECAG00000018659	SAFB	83	64.516	Equus_caballus
ENSAPLG00000005780	-	97	44.242	ENSELUG00000022327	safb	62	42.561	Esox_lucius
ENSAPLG00000005780	-	100	64.937	ENSFCAG00000011835	SAFB	93	65.783	Felis_catus
ENSAPLG00000005780	-	97	70.648	ENSFALG00000013881	-	99	70.762	Ficedula_albicollis
ENSAPLG00000005780	-	100	91.512	ENSFALG00000013882	-	86	91.512	Ficedula_albicollis
ENSAPLG00000005780	-	89	62.814	ENSFDAG00000020306	SAFB	92	62.814	Fukomys_damarensis
ENSAPLG00000005780	-	69	47.136	ENSFHEG00000004219	safb	60	38.407	Fundulus_heteroclitus
ENSAPLG00000005780	-	98	40.956	ENSGMOG00000014280	safb	59	39.192	Gadus_morhua
ENSAPLG00000005780	-	100	93.015	ENSGALG00000013365	-	93	93.015	Gallus_gallus
ENSAPLG00000005780	-	100	73.230	ENSGALG00000001948	-	94	73.230	Gallus_gallus
ENSAPLG00000005780	-	97	40.787	ENSGAFG00000016162	safb	61	37.248	Gambusia_affinis
ENSAPLG00000005780	-	98	42.953	ENSGACG00000011385	safb	50	41.556	Gasterosteus_aculeatus
ENSAPLG00000005780	-	95	70.964	ENSGAGG00000008424	-	93	72.125	Gopherus_agassizii
ENSAPLG00000005780	-	78	80.510	ENSGAGG00000017702	-	100	80.210	Gopherus_agassizii
ENSAPLG00000005780	-	100	64.360	ENSGGOG00000015109	SAFB	93	65.783	Gorilla_gorilla
ENSAPLG00000005780	-	98	42.222	ENSHBUG00000009218	safb	62	40.827	Haplochromis_burtoni
ENSAPLG00000005780	-	100	63.986	ENSHGLG00000015883	SAFB	94	63.420	Heterocephalus_glaber_female
ENSAPLG00000005780	-	100	51.751	ENSHGLG00100004228	SAFB	67	59.337	Heterocephalus_glaber_male
ENSAPLG00000005780	-	98	41.204	ENSHCOG00000001705	safb	99	38.549	Hippocampus_comes
ENSAPLG00000005780	-	97	46.109	ENSIPUG00000024869	safb2	59	44.186	Ictalurus_punctatus
ENSAPLG00000005780	-	99	63.554	ENSSTOG00000002783	SAFB	100	64.960	Ictidomys_tridecemlineatus
ENSAPLG00000005780	-	100	61.616	ENSJJAG00000009021	Safb	94	62.138	Jaculus_jaculus
ENSAPLG00000005780	-	93	45.455	ENSKMAG00000022308	safb	60	40.105	Kryptolebias_marmoratus
ENSAPLG00000005780	-	98	44.556	ENSLBEG00000006015	safb	59	42.408	Labrus_bergylta
ENSAPLG00000005780	-	64	53.158	ENSLACG00000018090	SAFB	96	54.031	Latimeria_chalumnae
ENSAPLG00000005780	-	98	50.169	ENSLOCG00000003613	safb	94	45.628	Lepisosteus_oculatus
ENSAPLG00000005780	-	96	64.804	ENSLAFG00000003840	SAFB	93	64.977	Loxodonta_africana
ENSAPLG00000005780	-	100	64.747	ENSMFAG00000003885	SAFB	93	64.902	Macaca_fascicularis
ENSAPLG00000005780	-	100	64.821	ENSMMUG00000017970	SAFB	93	65.668	Macaca_mulatta
ENSAPLG00000005780	-	100	62.414	ENSMNEG00000035637	SAFB	93	62.442	Macaca_nemestrina
ENSAPLG00000005780	-	100	61.194	ENSMLEG00000038637	SAFB	57	59.586	Mandrillus_leucophaeus
ENSAPLG00000005780	-	98	44.131	ENSMAMG00000003357	safb	55	39.510	Mastacembelus_armatus
ENSAPLG00000005780	-	98	44.931	ENSMZEG00005009120	safb	61	41.084	Maylandia_zebra
ENSAPLG00000005780	-	88	67.053	ENSMGAG00000001051	-	93	66.924	Meleagris_gallopavo
ENSAPLG00000005780	-	100	93.140	ENSMGAG00000001101	-	97	93.140	Meleagris_gallopavo
ENSAPLG00000005780	-	80	59.568	ENSMICG00000046795	-	88	59.712	Microcebus_murinus
ENSAPLG00000005780	-	100	64.014	ENSMICG00000008739	-	93	64.516	Microcebus_murinus
ENSAPLG00000005780	-	100	59.685	ENSMOCG00000014040	Safb	94	61.305	Microtus_ochrogaster
ENSAPLG00000005780	-	98	44.268	ENSMALG00000020330	safb	53	40.397	Monopterus_albus
ENSAPLG00000005780	-	100	60.562	MGP_CAROLIEiJ_G0021780	Safb	94	61.348	Mus_caroli
ENSAPLG00000005780	-	100	60.112	ENSMUSG00000071054	Safb	94	61.348	Mus_musculus
ENSAPLG00000005780	-	100	60.606	MGP_PahariEiJ_G0020769	Safb	94	61.392	Mus_pahari
ENSAPLG00000005780	-	100	64.245	ENSMPUG00000006123	SAFB	88	65.668	Mustela_putorius_furo
ENSAPLG00000005780	-	100	65.593	ENSMLUG00000001081	SAFB	93	65.593	Myotis_lucifugus
ENSAPLG00000005780	-	100	59.322	ENSNGAG00000019882	Safb	94	58.837	Nannospalax_galili
ENSAPLG00000005780	-	95	65.700	ENSNLEG00000013551	SAFB	93	65.459	Nomascus_leucogenys
ENSAPLG00000005780	-	95	60.510	ENSOPRG00000011561	-	100	61.968	Ochotona_princeps
ENSAPLG00000005780	-	100	63.657	ENSODEG00000014838	SAFB	94	63.431	Octodon_degus
ENSAPLG00000005780	-	98	45.475	ENSONIG00000002318	safb	60	42.504	Oreochromis_niloticus
ENSAPLG00000005780	-	97	57.738	ENSOCUG00000014628	SAFB	63	58.523	Oryctolagus_cuniculus
ENSAPLG00000005780	-	93	43.985	ENSORLG00000016989	safb	60	39.789	Oryzias_latipes
ENSAPLG00000005780	-	97	41.677	ENSORLG00020000404	safb	61	39.107	Oryzias_latipes_hni
ENSAPLG00000005780	-	97	43.554	ENSORLG00015010733	safb	60	39.789	Oryzias_latipes_hsok
ENSAPLG00000005780	-	98	43.249	ENSOMEG00000009066	safb	61	39.649	Oryzias_melastigma
ENSAPLG00000005780	-	65	62.032	ENSOGAG00000027769	SAFB	93	63.091	Otolemur_garnettii
ENSAPLG00000005780	-	84	60.055	ENSOARG00000007856	-	100	58.702	Ovis_aries
ENSAPLG00000005780	-	100	60.371	ENSOARG00000007662	-	93	58.570	Ovis_aries
ENSAPLG00000005780	-	100	64.747	ENSPPAG00000035129	SAFB	93	64.902	Pan_paniscus
ENSAPLG00000005780	-	100	64.360	ENSPPRG00000017197	SAFB	93	65.783	Panthera_pardus
ENSAPLG00000005780	-	100	64.747	ENSPTRG00000010335	SAFB	93	64.902	Pan_troglodytes
ENSAPLG00000005780	-	100	64.631	ENSPANG00000007770	SAFB	93	64.902	Papio_anubis
ENSAPLG00000005780	-	98	46.517	ENSPKIG00000009902	safb	62	44.007	Paramormyrops_kingsleyae
ENSAPLG00000005780	-	100	74.659	ENSPSIG00000011679	-	99	74.659	Pelodiscus_sinensis
ENSAPLG00000005780	-	100	83.541	ENSPSIG00000009367	-	94	83.201	Pelodiscus_sinensis
ENSAPLG00000005780	-	100	60.158	ENSPEMG00000020428	Safb	94	61.556	Peromyscus_maniculatus_bairdii
ENSAPLG00000005780	-	63	67.890	ENSPCIG00000009504	-	99	68.787	Phascolarctos_cinereus
ENSAPLG00000005780	-	91	43.017	ENSPFOG00000007745	safb	93	38.514	Poecilia_formosa
ENSAPLG00000005780	-	69	47.967	ENSPLAG00000001614	safb	61	38.462	Poecilia_latipinna
ENSAPLG00000005780	-	69	48.609	ENSPMEG00000021023	safb	68	42.970	Poecilia_mexicana
ENSAPLG00000005780	-	97	42.308	ENSPREG00000012496	safb	93	38.031	Poecilia_reticulata
ENSAPLG00000005780	-	100	64.706	ENSPPYG00000009428	SAFB	93	65.553	Pongo_abelii
ENSAPLG00000005780	-	100	60.550	ENSPCAG00000006475	SAFB	93	61.054	Procavia_capensis
ENSAPLG00000005780	-	100	61.034	ENSPCOG00000014090	SAFB	93	60.850	Propithecus_coquereli
ENSAPLG00000005780	-	100	59.677	ENSPVAG00000004913	SAFB	93	59.609	Pteropus_vampyrus
ENSAPLG00000005780	-	97	45.848	ENSPNAG00000021838	safb	93	42.969	Pygocentrus_nattereri
ENSAPLG00000005780	-	65	56.110	ENSRNOG00000050543	Safb	99	60.094	Rattus_norvegicus
ENSAPLG00000005780	-	100	58.420	ENSRBIG00000042509	SAFB	93	59.165	Rhinopithecus_bieti
ENSAPLG00000005780	-	100	64.747	ENSRROG00000029278	SAFB	93	64.902	Rhinopithecus_roxellana
ENSAPLG00000005780	-	100	64.821	ENSSBOG00000026291	SAFB	93	65.668	Saimiri_boliviensis_boliviensis
ENSAPLG00000005780	-	98	47.550	ENSSFOG00015008156	safb	61	45.611	Scleropages_formosus
ENSAPLG00000005780	-	98	44.619	ENSSMAG00000009316	safb	60	41.493	Scophthalmus_maximus
ENSAPLG00000005780	-	98	42.334	ENSSDUG00000009652	safb	63	39.432	Seriola_dumerili
ENSAPLG00000005780	-	98	42.584	ENSSLDG00000001670	safb	60	38.609	Seriola_lalandi_dorsalis
ENSAPLG00000005780	-	65	61.181	ENSSARG00000010475	SAFB	100	61.316	Sorex_araneus
ENSAPLG00000005780	-	87	67.591	ENSSPUG00000009820	-	98	69.735	Sphenodon_punctatus
ENSAPLG00000005780	-	60	71.984	ENSSPUG00000009747	-	99	69.576	Sphenodon_punctatus
ENSAPLG00000005780	-	98	41.017	ENSSPAG00000015682	safb	54	38.716	Stegastes_partitus
ENSAPLG00000005780	-	100	63.440	ENSSSCG00000013522	SAFB	92	66.713	Sus_scrofa
ENSAPLG00000005780	-	93	74.539	ENSTGUG00000000489	-	93	74.662	Taeniopygia_guttata
ENSAPLG00000005780	-	96	88.164	ENSTGUG00000000502	-	94	88.164	Taeniopygia_guttata
ENSAPLG00000005780	-	93	43.720	ENSTRUG00000003567	safb	94	39.282	Takifugu_rubripes
ENSAPLG00000005780	-	91	44.242	ENSTNIG00000015470	safb	96	43.494	Tetraodon_nigroviridis
ENSAPLG00000005780	-	91	63.476	ENSTTRG00000013588	SAFB	85	62.972	Tursiops_truncatus
ENSAPLG00000005780	-	82	64.056	ENSUAMG00000024543	SAFB	90	66.620	Ursus_americanus
ENSAPLG00000005780	-	87	61.331	ENSUMAG00000009734	SAFB	89	62.186	Ursus_maritimus
ENSAPLG00000005780	-	76	69.501	ENSVPAG00000012043	SAFB	79	68.035	Vicugna_pacos
ENSAPLG00000005780	-	100	64.245	ENSVVUG00000013720	SAFB	81	66.359	Vulpes_vulpes
ENSAPLG00000005780	-	64	47.653	ENSXETG00000008755	safb	93	50.909	Xenopus_tropicalis
ENSAPLG00000005780	-	70	48.413	ENSXMAG00000003458	safb	60	39.474	Xiphophorus_maculatus