EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000005965 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 20370 bases
Position: chrKB742473.1:549641-570010
Accession: 101790318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000005641	KH_1	PF00013.29	4.1e-70	1	4
ENSAPLP00000005641	KH_1	PF00013.29	4.1e-70	2	4
ENSAPLP00000005641	KH_1	PF00013.29	4.1e-70	3	4
ENSAPLP00000005641	KH_1	PF00013.29	4.1e-70	4	4
ENSAPLP00000005641	KH_2	PF07650.17	8.1e-23	1	2
ENSAPLP00000005641	KH_2	PF07650.17	8.1e-23	2	2
ENSAPLP00000005641	DUF1897	PF09005.10	6.2e-13	1	2
ENSAPLP00000005641	DUF1897	PF09005.10	6.2e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006272	FUBP1-201	2690	XM_005010304	ENSAPLP00000005641	602 (aa)	XP_012959704	U3IEG9

Gene Model

Click here to download ENSAPLG00000005965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000005965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000005965	FUBP1	99	52.310	ENSAPLG00000011238	FUBP3	81	65.542
ENSAPLG00000005965	FUBP1	57	31.169	ENSAPLG00000013290	IGF2BP3	62	30.412
ENSAPLG00000005965	FUBP1	55	40.625	ENSAPLG00000002975	-	62	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000005965	FUBP1	100	97.342	ENSG00000162613	FUBP1	93	97.181	Homo_sapiens
ENSAPLG00000005965	FUBP1	100	71.429	ENSAPOG00000014845	fubp1	65	77.566	Acanthochromis_polyacanthus
ENSAPLG00000005965	FUBP1	100	93.770	ENSAMEG00000007372	FUBP1	94	93.770	Ailuropoda_melanoleuca
ENSAPLG00000005965	FUBP1	100	70.279	ENSACIG00000020024	fubp1	64	75.181	Amphilophus_citrinellus
ENSAPLG00000005965	FUBP1	100	67.423	ENSAPEG00000012232	fubp1	67	78.417	Amphiprion_percula
ENSAPLG00000005965	FUBP1	100	73.300	ENSATEG00000018619	fubp1	65	80.145	Anabas_testudineus
ENSAPLG00000005965	FUBP1	100	86.025	ENSACAG00000006310	FUBP1	91	88.820	Anolis_carolinensis
ENSAPLG00000005965	FUBP1	100	72.177	ENSACLG00000006708	fubp1	66	79.661	Astatotilapia_calliptera
ENSAPLG00000005965	FUBP1	90	76.679	ENSAMXG00000005525	fubp1	64	86.628	Astyanax_mexicanus
ENSAPLG00000005965	FUBP1	100	97.508	ENSCJAG00000007062	FUBP1	93	97.508	Callithrix_jacchus
ENSAPLG00000005965	FUBP1	100	97.347	ENSCAFG00000020361	FUBP1	93	97.347	Canis_familiaris
ENSAPLG00000005965	FUBP1	100	97.015	ENSTSYG00000000148	FUBP1	99	97.015	Carlito_syrichta
ENSAPLG00000005965	FUBP1	61	98.168	ENSCAPG00000011052	-	67	98.168	Cavia_aperea
ENSAPLG00000005965	FUBP1	100	97.030	ENSCPOG00000002757	FUBP1	98	96.599	Cavia_porcellus
ENSAPLG00000005965	FUBP1	73	92.593	ENSCCAG00000036537	FUBP1	81	92.593	Cebus_capucinus
ENSAPLG00000005965	FUBP1	100	97.181	ENSCATG00000042126	FUBP1	93	97.181	Cercocebus_atys
ENSAPLG00000005965	FUBP1	100	97.181	ENSCLAG00000005621	FUBP1	100	96.178	Chinchilla_lanigera
ENSAPLG00000005965	FUBP1	100	97.181	ENSCSAG00000001402	FUBP1	93	97.181	Chlorocebus_sabaeus
ENSAPLG00000005965	FUBP1	100	97.512	ENSCHOG00000008177	FUBP1	92	97.512	Choloepus_hoffmanni
ENSAPLG00000005965	FUBP1	100	96.860	ENSCGRG00001007103	Fubp1	94	96.700	Cricetulus_griseus_chok1gshd
ENSAPLG00000005965	FUBP1	100	96.700	ENSCGRG00000003372	Fubp1	99	96.700	Cricetulus_griseus_crigri
ENSAPLG00000005965	FUBP1	100	71.639	ENSCSEG00000021412	fubp1	64	78.935	Cynoglossus_semilaevis
ENSAPLG00000005965	FUBP1	100	70.523	ENSCVAG00000014487	fubp1	60	85.269	Cyprinodon_variegatus
ENSAPLG00000005965	FUBP1	68	78.436	ENSDARG00000029248	fubp1	66	78.302	Danio_rerio
ENSAPLG00000005965	FUBP1	83	70.513	ENSDNOG00000034565	-	76	71.951	Dasypus_novemcinctus
ENSAPLG00000005965	FUBP1	100	97.347	ENSDORG00000016534	Fubp1	92	97.347	Dipodomys_ordii
ENSAPLG00000005965	FUBP1	75	98.693	ENSETEG00000000948	-	52	98.693	Echinops_telfairi
ENSAPLG00000005965	FUBP1	89	46.372	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSAPLG00000005965	FUBP1	72	96.429	ENSEEUG00000001287	FUBP1	82	96.429	Erinaceus_europaeus
ENSAPLG00000005965	FUBP1	100	70.065	ENSELUG00000007990	fubp1	87	76.303	Esox_lucius
ENSAPLG00000005965	FUBP1	100	99.834	ENSFALG00000005768	FUBP1	92	99.834	Ficedula_albicollis
ENSAPLG00000005965	FUBP1	100	97.181	ENSFDAG00000014210	FUBP1	100	95.918	Fukomys_damarensis
ENSAPLG00000005965	FUBP1	100	72.623	ENSFHEG00000005230	fubp1	65	83.333	Fundulus_heteroclitus
ENSAPLG00000005965	FUBP1	100	67.105	ENSGMOG00000003370	fubp1	65	70.602	Gadus_morhua
ENSAPLG00000005965	FUBP1	100	99.834	ENSGALG00000008939	FUBP1	98	99.834	Gallus_gallus
ENSAPLG00000005965	FUBP1	100	71.014	ENSGAFG00000020972	fubp1	86	79.750	Gambusia_affinis
ENSAPLG00000005965	FUBP1	100	71.707	ENSGACG00000016563	fubp1	65	78.282	Gasterosteus_aculeatus
ENSAPLG00000005965	FUBP1	100	70.886	ENSHBUG00000009835	fubp1	79	78.502	Haplochromis_burtoni
ENSAPLG00000005965	FUBP1	100	96.865	ENSHGLG00000008415	-	100	96.178	Heterocephalus_glaber_female
ENSAPLG00000005965	FUBP1	70	92.654	ENSHGLG00000002808	-	66	91.525	Heterocephalus_glaber_female
ENSAPLG00000005965	FUBP1	100	96.865	ENSHGLG00100003417	-	94	96.865	Heterocephalus_glaber_male
ENSAPLG00000005965	FUBP1	70	92.891	ENSHGLG00100001414	-	66	92.252	Heterocephalus_glaber_male
ENSAPLG00000005965	FUBP1	100	69.231	ENSHCOG00000000910	fubp1	66	76.761	Hippocampus_comes
ENSAPLG00000005965	FUBP1	100	73.171	ENSIPUG00000009896	fubp1	65	79.567	Ictalurus_punctatus
ENSAPLG00000005965	FUBP1	100	97.508	ENSSTOG00000014312	FUBP1	94	97.508	Ictidomys_tridecemlineatus
ENSAPLG00000005965	FUBP1	100	97.190	ENSJJAG00000020069	Fubp1	100	95.918	Jaculus_jaculus
ENSAPLG00000005965	FUBP1	100	71.921	ENSKMAG00000018897	fubp1	64	78.935	Kryptolebias_marmoratus
ENSAPLG00000005965	FUBP1	100	67.130	ENSLBEG00000012700	fubp1	68	76.566	Labrus_bergylta
ENSAPLG00000005965	FUBP1	98	70.912	ENSLOCG00000003745	fubp1	87	78.261	Lepisosteus_oculatus
ENSAPLG00000005965	FUBP1	100	94.071	ENSLAFG00000003273	FUBP1	99	96.029	Loxodonta_africana
ENSAPLG00000005965	FUBP1	100	97.342	ENSMFAG00000031825	FUBP1	93	97.342	Macaca_fascicularis
ENSAPLG00000005965	FUBP1	100	97.342	ENSMMUG00000002899	FUBP1	93	97.181	Macaca_mulatta
ENSAPLG00000005965	FUBP1	100	97.181	ENSMNEG00000045212	FUBP1	93	97.181	Macaca_nemestrina
ENSAPLG00000005965	FUBP1	100	72.204	ENSMZEG00005024298	fubp1	65	80.630	Maylandia_zebra
ENSAPLG00000005965	FUBP1	100	99.502	ENSMGAG00000009424	FUBP1	99	99.502	Meleagris_gallopavo
ENSAPLG00000005965	FUBP1	100	96.700	ENSMAUG00000016428	Fubp1	98	96.599	Mesocricetus_auratus
ENSAPLG00000005965	FUBP1	100	96.865	ENSMOCG00000014751	Fubp1	98	95.918	Microtus_ochrogaster
ENSAPLG00000005965	FUBP1	90	74.317	ENSMMOG00000019463	fubp1	64	83.099	Mola_mola
ENSAPLG00000005965	FUBP1	69	87.529	ENSMODG00000020804	FUBP1	67	87.529	Monodelphis_domestica
ENSAPLG00000005965	FUBP1	100	71.593	ENSMALG00000015173	fubp1	65	78.935	Monopterus_albus
ENSAPLG00000005965	FUBP1	100	97.347	MGP_CAROLIEiJ_G0025740	Fubp1	98	95.918	Mus_caroli
ENSAPLG00000005965	FUBP1	100	97.015	ENSMUSG00000028034	Fubp1	93	97.947	Mus_musculus
ENSAPLG00000005965	FUBP1	100	97.347	MGP_PahariEiJ_G0027191	Fubp1	98	95.918	Mus_pahari
ENSAPLG00000005965	FUBP1	100	97.181	MGP_SPRETEiJ_G0026693	Fubp1	98	95.918	Mus_spretus
ENSAPLG00000005965	FUBP1	100	93.005	ENSMLUG00000014802	FUBP1	94	93.005	Myotis_lucifugus
ENSAPLG00000005965	FUBP1	96	96.569	ENSNGAG00000014302	Fubp1	98	95.918	Nannospalax_galili
ENSAPLG00000005965	FUBP1	100	69.818	ENSNBRG00000015099	fubp1	66	79.661	Neolamprologus_brichardi
ENSAPLG00000005965	FUBP1	100	91.570	ENSNLEG00000009772	FUBP1	64	92.788	Nomascus_leucogenys
ENSAPLG00000005965	FUBP1	90	93.233	ENSOPRG00000001175	FUBP1	83	93.233	Ochotona_princeps
ENSAPLG00000005965	FUBP1	100	65.947	ENSODEG00000003657	-	65	68.281	Octodon_degus
ENSAPLG00000005965	FUBP1	100	97.347	ENSODEG00000002600	-	100	95.918	Octodon_degus
ENSAPLG00000005965	FUBP1	100	70.894	ENSONIG00000018381	fubp1	65	80.630	Oreochromis_niloticus
ENSAPLG00000005965	FUBP1	95	92.231	ENSOANG00000009777	FUBP1	99	92.066	Ornithorhynchus_anatinus
ENSAPLG00000005965	FUBP1	100	69.243	ENSORLG00020005908	fubp1	65	78.692	Oryzias_latipes_hni
ENSAPLG00000005965	FUBP1	100	69.134	ENSORLG00015008779	fubp1	65	78.692	Oryzias_latipes_hsok
ENSAPLG00000005965	FUBP1	68	79.562	ENSOMEG00000021943	fubp1	65	76.755	Oryzias_melastigma
ENSAPLG00000005965	FUBP1	100	93.175	ENSOGAG00000014233	FUBP1	94	93.175	Otolemur_garnettii
ENSAPLG00000005965	FUBP1	100	94.373	ENSOARG00000013259	FUBP1	94	94.212	Ovis_aries
ENSAPLG00000005965	FUBP1	100	97.347	ENSPPRG00000000413	FUBP1	93	97.347	Panthera_pardus
ENSAPLG00000005965	FUBP1	100	97.347	ENSPTIG00000019450	FUBP1	93	97.347	Panthera_tigris_altaica
ENSAPLG00000005965	FUBP1	100	98.339	ENSPSIG00000012965	FUBP1	99	98.475	Pelodiscus_sinensis
ENSAPLG00000005965	FUBP1	100	72.039	ENSPMGG00000009060	fubp1	66	77.804	Periophthalmus_magnuspinnatus
ENSAPLG00000005965	FUBP1	100	97.195	ENSPEMG00000021802	Fubp1	100	96.599	Peromyscus_maniculatus_bairdii
ENSAPLG00000005965	FUBP1	57	62.679	ENSPMAG00000001644	-	85	62.679	Petromyzon_marinus
ENSAPLG00000005965	FUBP1	100	70.033	ENSPLAG00000021170	fubp1	67	80.630	Poecilia_latipinna
ENSAPLG00000005965	FUBP1	100	73.510	ENSPMEG00000004747	fubp1	68	80.630	Poecilia_mexicana
ENSAPLG00000005965	FUBP1	100	72.787	ENSPREG00000017911	fubp1	63	84.751	Poecilia_reticulata
ENSAPLG00000005965	FUBP1	76	99.050	ENSPPYG00000001219	-	64	99.050	Pongo_abelii
ENSAPLG00000005965	FUBP1	100	97.347	ENSPCAG00000012617	FUBP1	92	97.347	Procavia_capensis
ENSAPLG00000005965	FUBP1	100	97.347	ENSPCOG00000024974	FUBP1	93	97.347	Propithecus_coquereli
ENSAPLG00000005965	FUBP1	69	92.029	ENSPVAG00000014637	FUBP1	63	92.029	Pteropus_vampyrus
ENSAPLG00000005965	FUBP1	100	72.177	ENSPNYG00000004552	fubp1	68	80.145	Pundamilia_nyererei
ENSAPLG00000005965	FUBP1	100	72.240	ENSPNAG00000016207	fubp1	81	78.910	Pygocentrus_nattereri
ENSAPLG00000005965	FUBP1	100	97.025	ENSRNOG00000043370	Fubp1	94	97.025	Rattus_norvegicus
ENSAPLG00000005965	FUBP1	100	97.181	ENSRBIG00000042950	FUBP1	93	97.181	Rhinopithecus_bieti
ENSAPLG00000005965	FUBP1	100	97.181	ENSRROG00000043534	FUBP1	93	97.181	Rhinopithecus_roxellana
ENSAPLG00000005965	FUBP1	100	97.347	ENSSBOG00000027299	FUBP1	97	97.353	Saimiri_boliviensis_boliviensis
ENSAPLG00000005965	FUBP1	100	96.370	ENSSHAG00000005367	FUBP1	99	97.278	Sarcophilus_harrisii
ENSAPLG00000005965	FUBP1	99	73.623	ENSSFOG00015010213	fubp1	65	80.482	Scleropages_formosus
ENSAPLG00000005965	FUBP1	100	70.806	ENSSDUG00000007383	fubp1	64	78.302	Seriola_dumerili
ENSAPLG00000005965	FUBP1	100	70.806	ENSSLDG00000022863	fubp1	67	78.125	Seriola_lalandi_dorsalis
ENSAPLG00000005965	FUBP1	69	98.851	ENSSARG00000011730	FUBP1	50	98.851	Sorex_araneus
ENSAPLG00000005965	FUBP1	100	89.228	ENSSPUG00000008389	FUBP1	94	88.491	Sphenodon_punctatus
ENSAPLG00000005965	FUBP1	100	73.058	ENSSPAG00000010161	fubp1	64	79.419	Stegastes_partitus
ENSAPLG00000005965	FUBP1	100	98.849	ENSTGUG00000006841	FUBP1	100	98.849	Taeniopygia_guttata
ENSAPLG00000005965	FUBP1	56	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSAPLG00000005965	FUBP1	87	99.405	ENSTBEG00000017333	FUBP1	65	99.405	Tupaia_belangeri
ENSAPLG00000005965	FUBP1	100	97.347	ENSTTRG00000000096	FUBP1	92	97.347	Tursiops_truncatus
ENSAPLG00000005965	FUBP1	100	97.347	ENSVPAG00000004709	FUBP1	93	97.347	Vicugna_pacos
ENSAPLG00000005965	FUBP1	100	70.315	ENSXCOG00000019354	fubp1	67	78.935	Xiphophorus_couchianus
ENSAPLG00000005965	FUBP1	97	73.083	ENSXMAG00000007168	fubp1	64	84.751	Xiphophorus_maculatus