EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000006109 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chrKB743045.1:1289566-1295236
Accession: 101794245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000005730	RRM_1	PF00076.22	9.4e-15	1	1
ENSAPLP00000005730	RRM_3	PF08777.11	2.1e-27	1	1
ENSAPLP00000005730	La	PF05383.17	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006362	SSB-201	1850	XM_005018929	ENSAPLP00000005730	423 (aa)	-	U3IEQ8

Gene Model

Click here to download ENSAPLG00000006109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000006109	SSB	100	71.429	ENSG00000138385	SSB	100	79.167	Homo_sapiens
ENSAPLG00000006109	SSB	99	53.555	ENSAPOG00000003448	ssb	100	53.428	Acanthochromis_polyacanthus
ENSAPLG00000006109	SSB	100	71.831	ENSAMEG00000010507	SSB	100	70.353	Ailuropoda_melanoleuca
ENSAPLG00000006109	SSB	77	61.350	ENSACIG00000001738	ssb	88	64.228	Amphilophus_citrinellus
ENSAPLG00000006109	SSB	99	53.081	ENSAOCG00000020398	ssb	100	53.191	Amphiprion_ocellaris
ENSAPLG00000006109	SSB	99	53.318	ENSAPEG00000020395	ssb	100	53.428	Amphiprion_percula
ENSAPLG00000006109	SSB	99	55.450	ENSATEG00000016884	ssb	100	55.083	Anabas_testudineus
ENSAPLG00000006109	SSB	100	67.209	ENSACAG00000017008	SSB	99	66.745	Anolis_carolinensis
ENSAPLG00000006109	SSB	100	64.235	ENSANAG00000027195	-	100	64.706	Aotus_nancymaae
ENSAPLG00000006109	SSB	99	52.133	ENSACLG00000010798	ssb	100	52.133	Astatotilapia_calliptera
ENSAPLG00000006109	SSB	97	52.885	ENSAMXG00000012606	ssb	100	54.118	Astyanax_mexicanus
ENSAPLG00000006109	SSB	100	72.471	ENSBTAG00000008716	SSB	100	70.755	Bos_taurus
ENSAPLG00000006109	SSB	70	36.842	WBGene00016653	C44E4.4	76	37.500	Caenorhabditis_elegans
ENSAPLG00000006109	SSB	100	71.529	ENSCJAG00000045073	SSB	100	70.047	Callithrix_jacchus
ENSAPLG00000006109	SSB	100	71.831	ENSCAFG00000012418	SSB	100	69.811	Canis_familiaris
ENSAPLG00000006109	SSB	100	71.831	ENSCAFG00020002900	SSB	100	69.811	Canis_lupus_dingo
ENSAPLG00000006109	SSB	100	68.384	ENSCHIG00000022196	-	100	66.901	Capra_hircus
ENSAPLG00000006109	SSB	100	72.706	ENSCHIG00000022624	-	100	71.226	Capra_hircus
ENSAPLG00000006109	SSB	100	71.294	ENSTSYG00000000097	SSB	100	69.811	Carlito_syrichta
ENSAPLG00000006109	SSB	100	73.131	ENSCPOG00000003338	SSB	100	71.663	Cavia_porcellus
ENSAPLG00000006109	SSB	100	71.529	ENSCCAG00000035147	SSB	100	70.047	Cebus_capucinus
ENSAPLG00000006109	SSB	79	64.080	ENSCATG00000036701	SSB	93	62.248	Cercocebus_atys
ENSAPLG00000006109	SSB	100	53.412	ENSCATG00000042909	-	100	51.415	Cercocebus_atys
ENSAPLG00000006109	SSB	100	72.471	ENSCLAG00000015617	-	100	70.991	Chinchilla_lanigera
ENSAPLG00000006109	SSB	98	64.748	ENSCSAG00000018390	-	100	64.904	Chlorocebus_sabaeus
ENSAPLG00000006109	SSB	100	71.529	ENSCSAG00000015200	SSB	89	70.047	Chlorocebus_sabaeus
ENSAPLG00000006109	SSB	100	71.765	ENSCHOG00000007763	SSB	100	70.283	Choloepus_hoffmanni
ENSAPLG00000006109	SSB	100	80.796	ENSCPBG00000006519	SSB	100	82.477	Chrysemys_picta_bellii
ENSAPLG00000006109	SSB	95	56.265	ENSCANG00000028838	-	91	55.198	Colobus_angolensis_palliatus
ENSAPLG00000006109	SSB	100	61.792	ENSCANG00000033240	-	100	61.792	Colobus_angolensis_palliatus
ENSAPLG00000006109	SSB	100	71.529	ENSCANG00000027695	SSB	100	70.047	Colobus_angolensis_palliatus
ENSAPLG00000006109	SSB	100	63.357	ENSCGRG00001024831	Ssb	100	65.412	Cricetulus_griseus_chok1gshd
ENSAPLG00000006109	SSB	100	63.357	ENSCGRG00000005387	Ssb	100	65.412	Cricetulus_griseus_crigri
ENSAPLG00000006109	SSB	97	53.511	ENSCSEG00000011599	ssb	99	53.125	Cynoglossus_semilaevis
ENSAPLG00000006109	SSB	99	54.976	ENSCVAG00000021558	ssb	100	54.739	Cyprinodon_variegatus
ENSAPLG00000006109	SSB	98	54.762	ENSDARG00000029252	ssb	99	54.118	Danio_rerio
ENSAPLG00000006109	SSB	100	72.235	ENSDNOG00000013450	SSB	100	70.755	Dasypus_novemcinctus
ENSAPLG00000006109	SSB	100	65.094	ENSDORG00000005543	Ssb	100	65.094	Dipodomys_ordii
ENSAPLG00000006109	SSB	75	35.366	FBgn0011638	La	79	34.337	Drosophila_melanogaster
ENSAPLG00000006109	SSB	94	46.005	ENSEBUG00000001237	ssb	94	44.697	Eptatretus_burgeri
ENSAPLG00000006109	SSB	100	72.235	ENSEASG00005022835	SSB	100	70.755	Equus_asinus_asinus
ENSAPLG00000006109	SSB	100	72.471	ENSECAG00000018495	SSB	100	70.991	Equus_caballus
ENSAPLG00000006109	SSB	72	62.418	ENSEEUG00000008077	SSB	78	62.418	Erinaceus_europaeus
ENSAPLG00000006109	SSB	99	57.920	ENSELUG00000020929	ssb	100	59.716	Esox_lucius
ENSAPLG00000006109	SSB	100	71.831	ENSFCAG00000011601	SSB	100	69.811	Felis_catus
ENSAPLG00000006109	SSB	100	87.028	ENSFALG00000000930	SSB	100	89.151	Ficedula_albicollis
ENSAPLG00000006109	SSB	100	72.235	ENSFDAG00000000598	SSB	100	70.755	Fukomys_damarensis
ENSAPLG00000006109	SSB	60	57.588	ENSFHEG00000003268	ssb	94	50.779	Fundulus_heteroclitus
ENSAPLG00000006109	SSB	97	53.623	ENSGMOG00000002664	ssb	100	53.753	Gadus_morhua
ENSAPLG00000006109	SSB	100	89.882	ENSGALG00000009677	SSB	100	89.176	Gallus_gallus
ENSAPLG00000006109	SSB	99	52.830	ENSGAFG00000002749	ssb	100	52.706	Gambusia_affinis
ENSAPLG00000006109	SSB	98	53.606	ENSGACG00000005107	ssb	99	53.494	Gasterosteus_aculeatus
ENSAPLG00000006109	SSB	100	80.562	ENSGAGG00000007807	SSB	100	82.243	Gopherus_agassizii
ENSAPLG00000006109	SSB	57	65.574	ENSGGOG00000023471	-	92	62.963	Gorilla_gorilla
ENSAPLG00000006109	SSB	100	58.588	ENSGGOG00000024891	-	100	57.783	Gorilla_gorilla
ENSAPLG00000006109	SSB	99	52.133	ENSHBUG00000006584	ssb	100	52.133	Haplochromis_burtoni
ENSAPLG00000006109	SSB	100	64.789	ENSHGLG00000005832	-	100	63.294	Heterocephalus_glaber_female
ENSAPLG00000006109	SSB	100	72.471	ENSHGLG00000017580	-	100	72.471	Heterocephalus_glaber_female
ENSAPLG00000006109	SSB	100	66.589	ENSHGLG00000004478	-	100	65.808	Heterocephalus_glaber_female
ENSAPLG00000006109	SSB	100	64.151	ENSHGLG00100008767	-	100	62.411	Heterocephalus_glaber_male
ENSAPLG00000006109	SSB	100	72.471	ENSHGLG00100003084	-	100	72.471	Heterocephalus_glaber_male
ENSAPLG00000006109	SSB	98	52.048	ENSHCOG00000019011	ssb	99	52.404	Hippocampus_comes
ENSAPLG00000006109	SSB	97	55.847	ENSIPUG00000003681	SSB	99	57.041	Ictalurus_punctatus
ENSAPLG00000006109	SSB	100	72.170	ENSSTOG00000008416	SSB	100	72.170	Ictidomys_tridecemlineatus
ENSAPLG00000006109	SSB	100	65.728	ENSJJAG00000023158	-	100	64.941	Jaculus_jaculus
ENSAPLG00000006109	SSB	99	51.185	ENSJJAG00000016250	-	99	50.356	Jaculus_jaculus
ENSAPLG00000006109	SSB	98	53.976	ENSKMAG00000017317	ssb	99	53.606	Kryptolebias_marmoratus
ENSAPLG00000006109	SSB	99	53.318	ENSLBEG00000017345	ssb	100	52.955	Labrus_bergylta
ENSAPLG00000006109	SSB	99	67.453	ENSLACG00000014056	SSB	99	67.453	Latimeria_chalumnae
ENSAPLG00000006109	SSB	97	64.251	ENSLOCG00000007933	ssb	98	64.578	Lepisosteus_oculatus
ENSAPLG00000006109	SSB	100	71.529	ENSLAFG00000000867	-	100	71.294	Loxodonta_africana
ENSAPLG00000006109	SSB	100	60.613	ENSLAFG00000028909	-	100	59.670	Loxodonta_africana
ENSAPLG00000006109	SSB	71	58.940	ENSLAFG00000026721	-	99	58.940	Loxodonta_africana
ENSAPLG00000006109	SSB	100	71.529	ENSMFAG00000039066	SSB	100	70.047	Macaca_fascicularis
ENSAPLG00000006109	SSB	88	63.032	ENSMFAG00000041478	-	94	66.071	Macaca_fascicularis
ENSAPLG00000006109	SSB	99	49.647	ENSMMUG00000039889	-	100	48.113	Macaca_mulatta
ENSAPLG00000006109	SSB	100	61.321	ENSMMUG00000011724	-	97	59.434	Macaca_mulatta
ENSAPLG00000006109	SSB	100	71.529	ENSMMUG00000023051	SSB	100	70.047	Macaca_mulatta
ENSAPLG00000006109	SSB	100	61.072	ENSMNEG00000028321	SSB	100	67.857	Macaca_nemestrina
ENSAPLG00000006109	SSB	88	63.032	ENSMNEG00000034698	-	94	66.071	Macaca_nemestrina
ENSAPLG00000006109	SSB	100	51.651	ENSMLEG00000042644	-	100	49.649	Mandrillus_leucophaeus
ENSAPLG00000006109	SSB	100	71.529	ENSMLEG00000035717	SSB	100	70.047	Mandrillus_leucophaeus
ENSAPLG00000006109	SSB	99	55.924	ENSMAMG00000004800	ssb	100	55.319	Mastacembelus_armatus
ENSAPLG00000006109	SSB	99	52.133	ENSMZEG00005005749	ssb	100	52.133	Maylandia_zebra
ENSAPLG00000006109	SSB	100	90.353	ENSMGAG00000010328	SSB	100	96.117	Meleagris_gallopavo
ENSAPLG00000006109	SSB	98	66.187	ENSMICG00000033304	-	93	68.586	Microcebus_murinus
ENSAPLG00000006109	SSB	99	72.235	ENSMICG00000028252	-	99	70.755	Microcebus_murinus
ENSAPLG00000006109	SSB	85	77.987	ENSMODG00000019271	-	99	77.987	Monodelphis_domestica
ENSAPLG00000006109	SSB	100	71.059	ENSMODG00000008227	-	100	68.396	Monodelphis_domestica
ENSAPLG00000006109	SSB	100	54.245	ENSMODG00000007027	-	100	53.774	Monodelphis_domestica
ENSAPLG00000006109	SSB	88	53.191	ENSMALG00000008045	ssb	88	53.886	Monopterus_albus
ENSAPLG00000006109	SSB	100	66.118	MGP_CAROLIEiJ_G0023629	-	100	76.630	Mus_caroli
ENSAPLG00000006109	SSB	100	65.412	ENSMUSG00000068882	Ssb	100	76.630	Mus_musculus
ENSAPLG00000006109	SSB	100	65.094	MGP_PahariEiJ_G0025081	-	100	76.087	Mus_pahari
ENSAPLG00000006109	SSB	100	65.412	MGP_SPRETEiJ_G0024551	Ssb	100	76.630	Mus_spretus
ENSAPLG00000006109	SSB	100	72.471	ENSMPUG00000000785	SSB	100	70.991	Mustela_putorius_furo
ENSAPLG00000006109	SSB	100	72.941	ENSMLUG00000016316	SSB	100	72.941	Myotis_lucifugus
ENSAPLG00000006109	SSB	99	52.370	ENSNBRG00000012661	ssb	100	52.370	Neolamprologus_brichardi
ENSAPLG00000006109	SSB	100	71.529	ENSNLEG00000004958	SSB	100	70.047	Nomascus_leucogenys
ENSAPLG00000006109	SSB	100	54.118	ENSNLEG00000028754	-	100	53.882	Nomascus_leucogenys
ENSAPLG00000006109	SSB	59	80.242	ENSMEUG00000001650	-	100	80.242	Notamacropus_eugenii
ENSAPLG00000006109	SSB	51	81.290	ENSOPRG00000008475	-	75	81.290	Ochotona_princeps
ENSAPLG00000006109	SSB	93	69.192	ENSODEG00000004202	-	99	68.434	Octodon_degus
ENSAPLG00000006109	SSB	99	52.844	ENSONIG00000008776	ssb	100	52.370	Oreochromis_niloticus
ENSAPLG00000006109	SSB	100	71.934	ENSOANG00000008543	SSB	100	72.235	Ornithorhynchus_anatinus
ENSAPLG00000006109	SSB	100	71.831	ENSOCUG00000010396	SSB	100	70.824	Oryctolagus_cuniculus
ENSAPLG00000006109	SSB	99	53.791	ENSORLG00000017208	ssb	100	53.664	Oryzias_latipes
ENSAPLG00000006109	SSB	99	54.028	ENSORLG00020022574	ssb	100	53.901	Oryzias_latipes_hni
ENSAPLG00000006109	SSB	99	54.028	ENSORLG00015016592	ssb	100	53.428	Oryzias_latipes_hsok
ENSAPLG00000006109	SSB	99	55.450	ENSOMEG00000003193	ssb	100	55.687	Oryzias_melastigma
ENSAPLG00000006109	SSB	100	69.575	ENSOGAG00000029768	SSB	100	69.575	Otolemur_garnettii
ENSAPLG00000006109	SSB	100	72.706	ENSOARG00000002906	SSB	100	71.226	Ovis_aries
ENSAPLG00000006109	SSB	100	57.882	ENSPPAG00000032427	-	100	68.992	Pan_paniscus
ENSAPLG00000006109	SSB	89	58.886	ENSPPAG00000006189	-	93	57.937	Pan_paniscus
ENSAPLG00000006109	SSB	100	71.429	ENSPPAG00000042673	SSB	100	69.953	Pan_paniscus
ENSAPLG00000006109	SSB	100	71.831	ENSPPRG00000006599	SSB	100	69.811	Panthera_pardus
ENSAPLG00000006109	SSB	100	71.831	ENSPTIG00000011021	SSB	97	69.811	Panthera_tigris_altaica
ENSAPLG00000006109	SSB	100	55.869	ENSPTRG00000042880	-	100	53.538	Pan_troglodytes
ENSAPLG00000006109	SSB	100	71.429	ENSPTRG00000012620	SSB	100	69.953	Pan_troglodytes
ENSAPLG00000006109	SSB	100	52.594	ENSPANG00000034126	-	100	51.628	Papio_anubis
ENSAPLG00000006109	SSB	95	52.723	ENSPANG00000031877	-	90	50.750	Papio_anubis
ENSAPLG00000006109	SSB	100	71.529	ENSPANG00000007440	SSB	100	70.047	Papio_anubis
ENSAPLG00000006109	SSB	99	60.095	ENSPKIG00000019325	ssb	99	60.900	Paramormyrops_kingsleyae
ENSAPLG00000006109	SSB	100	79.157	ENSPSIG00000002265	SSB	93	80.841	Pelodiscus_sinensis
ENSAPLG00000006109	SSB	71	56.146	ENSPMGG00000020075	ssb	91	50.546	Periophthalmus_magnuspinnatus
ENSAPLG00000006109	SSB	77	51.220	ENSPMAG00000002982	ssb	100	45.125	Petromyzon_marinus
ENSAPLG00000006109	SSB	100	69.976	ENSPCIG00000028591	-	100	71.934	Phascolarctos_cinereus
ENSAPLG00000006109	SSB	99	53.555	ENSPFOG00000009650	ssb	100	53.664	Poecilia_formosa
ENSAPLG00000006109	SSB	77	60.736	ENSPLAG00000020498	ssb	100	53.664	Poecilia_latipinna
ENSAPLG00000006109	SSB	99	53.318	ENSPMEG00000001051	ssb	100	53.428	Poecilia_mexicana
ENSAPLG00000006109	SSB	94	54.637	ENSPREG00000003708	ssb	99	54.500	Poecilia_reticulata
ENSAPLG00000006109	SSB	100	71.529	ENSPPYG00000012919	SSB	100	70.047	Pongo_abelii
ENSAPLG00000006109	SSB	95	68.657	ENSPCAG00000010276	SSB	100	67.413	Procavia_capensis
ENSAPLG00000006109	SSB	100	69.087	ENSPCOG00000015741	-	100	66.901	Propithecus_coquereli
ENSAPLG00000006109	SSB	100	63.059	ENSPCOG00000023189	-	100	61.557	Propithecus_coquereli
ENSAPLG00000006109	SSB	87	73.297	ENSPVAG00000006615	SSB	99	73.297	Pteropus_vampyrus
ENSAPLG00000006109	SSB	99	52.133	ENSPNYG00000006444	ssb	100	52.133	Pundamilia_nyererei
ENSAPLG00000006109	SSB	98	53.095	ENSPNAG00000011708	ssb	100	54.567	Pygocentrus_nattereri
ENSAPLG00000006109	SSB	100	62.588	ENSRNOG00000011606	AABR07061825.1	100	62.028	Rattus_norvegicus
ENSAPLG00000006109	SSB	100	65.176	ENSRNOG00000007998	Ssb	100	64.387	Rattus_norvegicus
ENSAPLG00000006109	SSB	100	51.054	ENSRBIG00000029918	-	100	48.592	Rhinopithecus_bieti
ENSAPLG00000006109	SSB	89	65.617	ENSRBIG00000041608	-	97	65.079	Rhinopithecus_bieti
ENSAPLG00000006109	SSB	94	59.900	ENSRBIG00000041232	-	98	60.354	Rhinopithecus_bieti
ENSAPLG00000006109	SSB	100	58.837	ENSRBIG00000041972	SSB	100	67.857	Rhinopithecus_bieti
ENSAPLG00000006109	SSB	100	71.529	ENSRROG00000040346	SSB	100	70.047	Rhinopithecus_roxellana
ENSAPLG00000006109	SSB	100	59.112	ENSRROG00000007149	-	100	57.611	Rhinopithecus_roxellana
ENSAPLG00000006109	SSB	89	68.063	ENSRROG00000034102	-	98	62.830	Rhinopithecus_roxellana
ENSAPLG00000006109	SSB	98	60.817	ENSRROG00000031684	-	100	60.964	Rhinopithecus_roxellana
ENSAPLG00000006109	SSB	100	71.765	ENSSBOG00000027204	SSB	100	70.283	Saimiri_boliviensis_boliviensis
ENSAPLG00000006109	SSB	100	69.976	ENSSHAG00000018062	SSB	100	71.226	Sarcophilus_harrisii
ENSAPLG00000006109	SSB	99	58.920	ENSSFOG00015000550	ssb	100	59.953	Scleropages_formosus
ENSAPLG00000006109	SSB	97	50.728	ENSSMAG00000013885	ssb	99	54.756	Scophthalmus_maximus
ENSAPLG00000006109	SSB	99	55.213	ENSSDUG00000020117	ssb	100	54.610	Seriola_dumerili
ENSAPLG00000006109	SSB	99	52.969	ENSSLDG00000002525	ssb	100	52.494	Seriola_lalandi_dorsalis
ENSAPLG00000006109	SSB	95	64.677	ENSSARG00000007747	SSB	100	64.677	Sorex_araneus
ENSAPLG00000006109	SSB	100	75.708	ENSSPUG00000012112	SSB	100	78.118	Sphenodon_punctatus
ENSAPLG00000006109	SSB	97	53.753	ENSSPAG00000005696	ssb	100	53.191	Stegastes_partitus
ENSAPLG00000006109	SSB	98	63.221	ENSSSCG00000015938	SSB	84	70.833	Sus_scrofa
ENSAPLG00000006109	SSB	100	86.150	ENSTGUG00000007942	SSB	100	88.263	Taeniopygia_guttata
ENSAPLG00000006109	SSB	99	54.502	ENSTRUG00000017839	ssb	100	54.739	Takifugu_rubripes
ENSAPLG00000006109	SSB	78	62.275	ENSTNIG00000000915	ssb	93	62.275	Tetraodon_nigroviridis
ENSAPLG00000006109	SSB	83	77.391	ENSTBEG00000009056	SSB	82	77.391	Tupaia_belangeri
ENSAPLG00000006109	SSB	100	71.831	ENSTTRG00000002152	SSB	100	70.118	Tursiops_truncatus
ENSAPLG00000006109	SSB	92	73.846	ENSUAMG00000027833	SSB	98	72.237	Ursus_americanus
ENSAPLG00000006109	SSB	100	72.000	ENSUMAG00000013907	SSB	100	70.519	Ursus_maritimus
ENSAPLG00000006109	SSB	100	71.765	ENSVPAG00000007183	SSB	100	70.283	Vicugna_pacos
ENSAPLG00000006109	SSB	100	71.831	ENSVVUG00000016573	SSB	78	69.811	Vulpes_vulpes
ENSAPLG00000006109	SSB	100	58.652	ENSXETG00000025402	ssb	100	56.054	Xenopus_tropicalis
ENSAPLG00000006109	SSB	77	58.154	ENSXCOG00000019109	ssb	93	63.281	Xiphophorus_couchianus
ENSAPLG00000006109	SSB	99	53.066	ENSXMAG00000004888	ssb	100	52.941	Xiphophorus_maculatus