EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000006330 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 14231 bases
Position: chrKB743257.1:310158-324388
Accession: 101800700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000005978	Beta-Casp	PF10996.8	1.4e-20	1	1
ENSAPLP00000005978	Lactamase_B	PF00753.27	7.3e-07	1	1
ENSAPLP00000005978	RMMBL	PF07521.12	4.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006614	CPSF2-201	3454	XM_005021445	ENSAPLP00000005978	784 (aa)	XP_005021502	U3IFF6

Gene Model

Click here to download ENSAPLG00000006330's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000006330	CPSF2	100	96.051	ENSG00000165934	CPSF2	100	96.250	Homo_sapiens
ENSAPLG00000006330	CPSF2	100	85.190	ENSAPOG00000001242	cpsf2	100	85.190	Acanthochromis_polyacanthus
ENSAPLG00000006330	CPSF2	100	85.588	ENSACIG00000009331	cpsf2	100	85.588	Amphilophus_citrinellus
ENSAPLG00000006330	CPSF2	100	85.443	ENSAOCG00000014095	cpsf2	100	85.443	Amphiprion_ocellaris
ENSAPLG00000006330	CPSF2	100	85.443	ENSAPEG00000009158	cpsf2	100	85.443	Amphiprion_percula
ENSAPLG00000006330	CPSF2	96	85.940	ENSATEG00000017644	cpsf2	100	83.973	Anabas_testudineus
ENSAPLG00000006330	CPSF2	100	95.541	ENSACAG00000009245	CPSF2	100	95.541	Anolis_carolinensis
ENSAPLG00000006330	CPSF2	100	96.051	ENSANAG00000022915	CPSF2	100	96.051	Aotus_nancymaae
ENSAPLG00000006330	CPSF2	100	85.551	ENSAMXG00000018696	cpsf2	100	85.551	Astyanax_mexicanus
ENSAPLG00000006330	CPSF2	100	96.433	ENSBTAG00000010227	CPSF2	100	96.433	Bos_taurus
ENSAPLG00000006330	CPSF2	100	40.281	WBGene00017313	cpsf-2	100	40.330	Caenorhabditis_elegans
ENSAPLG00000006330	CPSF2	100	96.051	ENSCJAG00000018069	CPSF2	100	96.051	Callithrix_jacchus
ENSAPLG00000006330	CPSF2	100	96.051	ENSCAFG00000010909	CPSF2	100	96.051	Canis_familiaris
ENSAPLG00000006330	CPSF2	100	96.051	ENSCAFG00020020670	CPSF2	100	96.051	Canis_lupus_dingo
ENSAPLG00000006330	CPSF2	100	96.433	ENSCHIG00000023848	CPSF2	100	96.433	Capra_hircus
ENSAPLG00000006330	CPSF2	100	95.541	ENSTSYG00000009036	CPSF2	100	95.541	Carlito_syrichta
ENSAPLG00000006330	CPSF2	100	96.178	ENSCPOG00000010899	CPSF2	100	96.178	Cavia_porcellus
ENSAPLG00000006330	CPSF2	100	96.051	ENSCCAG00000028088	CPSF2	100	96.051	Cebus_capucinus
ENSAPLG00000006330	CPSF2	100	96.178	ENSCATG00000030132	CPSF2	100	96.178	Cercocebus_atys
ENSAPLG00000006330	CPSF2	100	96.051	ENSCLAG00000012404	CPSF2	100	96.051	Chinchilla_lanigera
ENSAPLG00000006330	CPSF2	100	96.178	ENSCSAG00000011300	CPSF2	100	96.178	Chlorocebus_sabaeus
ENSAPLG00000006330	CPSF2	100	89.936	ENSCHOG00000012904	CPSF2	100	89.936	Choloepus_hoffmanni
ENSAPLG00000006330	CPSF2	100	97.834	ENSCPBG00000008766	CPSF2	97	97.834	Chrysemys_picta_bellii
ENSAPLG00000006330	CPSF2	100	54.364	ENSCING00000007881	-	100	53.990	Ciona_intestinalis
ENSAPLG00000006330	CPSF2	94	96.054	ENSCANG00000041651	CPSF2	100	96.054	Colobus_angolensis_palliatus
ENSAPLG00000006330	CPSF2	100	95.924	ENSCGRG00001006901	Cpsf2	100	95.924	Cricetulus_griseus_chok1gshd
ENSAPLG00000006330	CPSF2	100	95.924	ENSCGRG00000012416	Cpsf2	100	95.924	Cricetulus_griseus_crigri
ENSAPLG00000006330	CPSF2	100	83.565	ENSCSEG00000004116	cpsf2	100	83.565	Cynoglossus_semilaevis
ENSAPLG00000006330	CPSF2	100	85.190	ENSCVAG00000000095	cpsf2	100	85.190	Cyprinodon_variegatus
ENSAPLG00000006330	CPSF2	100	85.227	ENSDARG00000028971	cpsf2	100	85.227	Danio_rerio
ENSAPLG00000006330	CPSF2	100	96.306	ENSDNOG00000042757	CPSF2	100	96.306	Dasypus_novemcinctus
ENSAPLG00000006330	CPSF2	100	95.796	ENSDORG00000013709	Cpsf2	100	95.796	Dipodomys_ordii
ENSAPLG00000006330	CPSF2	100	53.109	FBgn0027873	Cpsf100	100	52.868	Drosophila_melanogaster
ENSAPLG00000006330	CPSF2	100	87.277	ENSETEG00000012123	CPSF2	100	87.277	Echinops_telfairi
ENSAPLG00000006330	CPSF2	52	75.795	ENSEBUG00000012098	cpsf2	93	75.795	Eptatretus_burgeri
ENSAPLG00000006330	CPSF2	91	96.259	ENSEASG00005021193	CPSF2	100	96.259	Equus_asinus_asinus
ENSAPLG00000006330	CPSF2	100	95.924	ENSECAG00000023935	CPSF2	100	95.924	Equus_caballus
ENSAPLG00000006330	CPSF2	100	83.980	ENSELUG00000008442	cpsf2	100	83.980	Esox_lucius
ENSAPLG00000006330	CPSF2	100	95.924	ENSFCAG00000007886	CPSF2	100	95.924	Felis_catus
ENSAPLG00000006330	CPSF2	100	98.724	ENSFALG00000002412	CPSF2	100	98.724	Ficedula_albicollis
ENSAPLG00000006330	CPSF2	100	96.051	ENSFDAG00000006327	CPSF2	100	96.051	Fukomys_damarensis
ENSAPLG00000006330	CPSF2	96	84.156	ENSFHEG00000015465	cpsf2	98	84.545	Fundulus_heteroclitus
ENSAPLG00000006330	CPSF2	100	83.270	ENSGMOG00000008761	cpsf2	100	83.270	Gadus_morhua
ENSAPLG00000006330	CPSF2	100	98.852	ENSGALG00000010783	CPSF2	100	98.852	Gallus_gallus
ENSAPLG00000006330	CPSF2	100	85.190	ENSGAFG00000001407	cpsf2	100	85.190	Gambusia_affinis
ENSAPLG00000006330	CPSF2	100	84.684	ENSGACG00000008418	cpsf2	100	84.684	Gasterosteus_aculeatus
ENSAPLG00000006330	CPSF2	100	97.707	ENSGAGG00000008287	CPSF2	100	97.707	Gopherus_agassizii
ENSAPLG00000006330	CPSF2	100	96.051	ENSGGOG00000011799	CPSF2	100	96.051	Gorilla_gorilla
ENSAPLG00000006330	CPSF2	100	85.316	ENSHBUG00000023466	cpsf2	100	85.316	Haplochromis_burtoni
ENSAPLG00000006330	CPSF2	100	95.924	ENSHGLG00000018311	CPSF2	100	95.924	Heterocephalus_glaber_female
ENSAPLG00000006330	CPSF2	100	95.924	ENSHGLG00100016460	CPSF2	100	95.924	Heterocephalus_glaber_male
ENSAPLG00000006330	CPSF2	100	84.810	ENSHCOG00000019527	cpsf2	98	84.810	Hippocampus_comes
ENSAPLG00000006330	CPSF2	100	85.678	ENSIPUG00000020857	cpsf2	100	85.678	Ictalurus_punctatus
ENSAPLG00000006330	CPSF2	100	96.051	ENSSTOG00000009528	CPSF2	100	96.051	Ictidomys_tridecemlineatus
ENSAPLG00000006330	CPSF2	100	96.178	ENSJJAG00000017925	Cpsf2	100	96.178	Jaculus_jaculus
ENSAPLG00000006330	CPSF2	100	84.177	ENSKMAG00000019429	cpsf2	100	84.177	Kryptolebias_marmoratus
ENSAPLG00000006330	CPSF2	95	83.979	ENSLBEG00000011585	cpsf2	100	83.979	Labrus_bergylta
ENSAPLG00000006330	CPSF2	100	90.689	ENSLACG00000019024	CPSF2	100	90.689	Latimeria_chalumnae
ENSAPLG00000006330	CPSF2	100	87.611	ENSLOCG00000014102	cpsf2	100	87.611	Lepisosteus_oculatus
ENSAPLG00000006330	CPSF2	100	96.056	ENSLAFG00000004891	CPSF2	100	96.056	Loxodonta_africana
ENSAPLG00000006330	CPSF2	100	96.178	ENSMFAG00000041212	CPSF2	100	96.178	Macaca_fascicularis
ENSAPLG00000006330	CPSF2	100	96.178	ENSMMUG00000000699	CPSF2	100	96.178	Macaca_mulatta
ENSAPLG00000006330	CPSF2	100	96.178	ENSMNEG00000031584	CPSF2	100	96.178	Macaca_nemestrina
ENSAPLG00000006330	CPSF2	100	96.178	ENSMLEG00000029394	CPSF2	100	96.178	Mandrillus_leucophaeus
ENSAPLG00000006330	CPSF2	100	85.443	ENSMAMG00000004235	cpsf2	100	85.443	Mastacembelus_armatus
ENSAPLG00000006330	CPSF2	100	85.443	ENSMZEG00005001769	cpsf2	100	85.443	Maylandia_zebra
ENSAPLG00000006330	CPSF2	100	99.107	ENSMGAG00000013122	CPSF2	100	99.107	Meleagris_gallopavo
ENSAPLG00000006330	CPSF2	100	95.924	ENSMAUG00000015160	Cpsf2	100	95.924	Mesocricetus_auratus
ENSAPLG00000006330	CPSF2	100	96.306	ENSMICG00000016441	CPSF2	100	96.306	Microcebus_murinus
ENSAPLG00000006330	CPSF2	100	95.924	ENSMOCG00000015372	Cpsf2	100	95.924	Microtus_ochrogaster
ENSAPLG00000006330	CPSF2	100	80.759	ENSMMOG00000015590	cpsf2	100	80.759	Mola_mola
ENSAPLG00000006330	CPSF2	100	96.688	ENSMODG00000002042	CPSF2	100	96.688	Monodelphis_domestica
ENSAPLG00000006330	CPSF2	100	82.152	ENSMALG00000022275	cpsf2	100	82.152	Monopterus_albus
ENSAPLG00000006330	CPSF2	100	95.287	ENSMUSG00000041781	Cpsf2	100	95.287	Mus_musculus
ENSAPLG00000006330	CPSF2	100	95.541	MGP_PahariEiJ_G0029791	Cpsf2	100	95.541	Mus_pahari
ENSAPLG00000006330	CPSF2	100	95.287	MGP_SPRETEiJ_G0018877	Cpsf2	100	95.287	Mus_spretus
ENSAPLG00000006330	CPSF2	100	96.051	ENSMPUG00000007617	CPSF2	98	96.051	Mustela_putorius_furo
ENSAPLG00000006330	CPSF2	100	95.796	ENSMLUG00000005570	CPSF2	100	95.796	Myotis_lucifugus
ENSAPLG00000006330	CPSF2	100	96.306	ENSNGAG00000020312	Cpsf2	100	96.306	Nannospalax_galili
ENSAPLG00000006330	CPSF2	100	85.588	ENSNBRG00000022402	cpsf2	100	85.588	Neolamprologus_brichardi
ENSAPLG00000006330	CPSF2	100	95.159	ENSNLEG00000017132	CPSF2	100	95.159	Nomascus_leucogenys
ENSAPLG00000006330	CPSF2	91	99.032	ENSMEUG00000008138	CPSF2	91	99.032	Notamacropus_eugenii
ENSAPLG00000006330	CPSF2	94	89.101	ENSOPRG00000008484	-	100	89.101	Ochotona_princeps
ENSAPLG00000006330	CPSF2	100	96.051	ENSODEG00000008682	CPSF2	100	96.051	Octodon_degus
ENSAPLG00000006330	CPSF2	100	85.823	ENSONIG00000005901	cpsf2	100	85.823	Oreochromis_niloticus
ENSAPLG00000006330	CPSF2	100	95.924	ENSOANG00000003822	CPSF2	100	95.924	Ornithorhynchus_anatinus
ENSAPLG00000006330	CPSF2	100	96.178	ENSOCUG00000005713	CPSF2	100	96.178	Oryctolagus_cuniculus
ENSAPLG00000006330	CPSF2	100	79.620	ENSORLG00000011628	cpsf2	100	79.620	Oryzias_latipes
ENSAPLG00000006330	CPSF2	100	84.430	ENSORLG00020016980	cpsf2	100	84.430	Oryzias_latipes_hni
ENSAPLG00000006330	CPSF2	100	84.430	ENSORLG00015011910	cpsf2	100	84.430	Oryzias_latipes_hsok
ENSAPLG00000006330	CPSF2	100	83.712	ENSOMEG00000022876	cpsf2	100	83.712	Oryzias_melastigma
ENSAPLG00000006330	CPSF2	100	93.511	ENSOARG00000012889	CPSF2	100	93.511	Ovis_aries
ENSAPLG00000006330	CPSF2	100	96.051	ENSPPAG00000039666	CPSF2	100	96.051	Pan_paniscus
ENSAPLG00000006330	CPSF2	99	95.918	ENSPPRG00000010869	CPSF2	100	95.918	Panthera_pardus
ENSAPLG00000006330	CPSF2	100	95.924	ENSPTIG00000021202	CPSF2	100	95.924	Panthera_tigris_altaica
ENSAPLG00000006330	CPSF2	100	96.051	ENSPTRG00000006651	CPSF2	100	96.051	Pan_troglodytes
ENSAPLG00000006330	CPSF2	100	96.178	ENSPANG00000017417	CPSF2	100	96.178	Papio_anubis
ENSAPLG00000006330	CPSF2	100	81.242	ENSPKIG00000021453	cpsf2	100	81.242	Paramormyrops_kingsleyae
ENSAPLG00000006330	CPSF2	100	97.070	ENSPSIG00000006289	CPSF2	100	97.070	Pelodiscus_sinensis
ENSAPLG00000006330	CPSF2	76	79.602	ENSPMGG00000002511	cpsf2	100	79.768	Periophthalmus_magnuspinnatus
ENSAPLG00000006330	CPSF2	100	96.051	ENSPEMG00000007917	Cpsf2	100	96.051	Peromyscus_maniculatus_bairdii
ENSAPLG00000006330	CPSF2	100	73.897	ENSPMAG00000006205	cpsf2	100	73.897	Petromyzon_marinus
ENSAPLG00000006330	CPSF2	100	96.688	ENSPCIG00000011393	CPSF2	100	96.688	Phascolarctos_cinereus
ENSAPLG00000006330	CPSF2	100	85.190	ENSPFOG00000018648	cpsf2	100	85.190	Poecilia_formosa
ENSAPLG00000006330	CPSF2	100	85.190	ENSPLAG00000019199	cpsf2	99	85.190	Poecilia_latipinna
ENSAPLG00000006330	CPSF2	96	85.545	ENSPMEG00000012100	cpsf2	100	84.780	Poecilia_mexicana
ENSAPLG00000006330	CPSF2	100	84.937	ENSPREG00000008960	cpsf2	100	84.937	Poecilia_reticulata
ENSAPLG00000006330	CPSF2	63	94.578	ENSPPYG00000029685	-	100	94.578	Pongo_abelii
ENSAPLG00000006330	CPSF2	100	95.924	ENSPCAG00000012477	CPSF2	100	95.924	Procavia_capensis
ENSAPLG00000006330	CPSF2	100	96.178	ENSPCOG00000026387	CPSF2	100	96.178	Propithecus_coquereli
ENSAPLG00000006330	CPSF2	65	97.970	ENSPVAG00000004223	CPSF2	65	97.970	Pteropus_vampyrus
ENSAPLG00000006330	CPSF2	100	85.461	ENSPNYG00000023356	cpsf2	100	85.461	Pundamilia_nyererei
ENSAPLG00000006330	CPSF2	100	86.565	ENSPNAG00000001849	cpsf2	100	86.565	Pygocentrus_nattereri
ENSAPLG00000006330	CPSF2	100	95.924	ENSRNOG00000005733	Cpsf2	100	95.924	Rattus_norvegicus
ENSAPLG00000006330	CPSF2	100	96.178	ENSRBIG00000044792	CPSF2	100	96.178	Rhinopithecus_bieti
ENSAPLG00000006330	CPSF2	100	96.178	ENSRROG00000034875	CPSF2	100	96.178	Rhinopithecus_roxellana
ENSAPLG00000006330	CPSF2	100	96.051	ENSSBOG00000024571	CPSF2	100	96.051	Saimiri_boliviensis_boliviensis
ENSAPLG00000006330	CPSF2	100	96.688	ENSSHAG00000010458	CPSF2	100	96.688	Sarcophilus_harrisii
ENSAPLG00000006330	CPSF2	100	86.582	ENSSFOG00015002117	cpsf2	100	86.692	Scleropages_formosus
ENSAPLG00000006330	CPSF2	100	83.753	ENSSMAG00000002001	cpsf2	100	84.576	Scophthalmus_maximus
ENSAPLG00000006330	CPSF2	100	85.823	ENSSDUG00000004084	cpsf2	100	85.823	Seriola_dumerili
ENSAPLG00000006330	CPSF2	100	85.714	ENSSLDG00000024330	cpsf2	100	85.714	Seriola_lalandi_dorsalis
ENSAPLG00000006330	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSAPLG00000006330	CPSF2	100	97.070	ENSSPUG00000013485	CPSF2	100	97.070	Sphenodon_punctatus
ENSAPLG00000006330	CPSF2	100	84.810	ENSSPAG00000013284	cpsf2	100	84.810	Stegastes_partitus
ENSAPLG00000006330	CPSF2	100	96.051	ENSSSCG00000002447	CPSF2	100	96.051	Sus_scrofa
ENSAPLG00000006330	CPSF2	100	98.852	ENSTGUG00000012571	-	100	98.852	Taeniopygia_guttata
ENSAPLG00000006330	CPSF2	100	84.810	ENSTRUG00000003742	cpsf2	100	84.810	Takifugu_rubripes
ENSAPLG00000006330	CPSF2	100	83.460	ENSTNIG00000012228	cpsf2	100	84.217	Tetraodon_nigroviridis
ENSAPLG00000006330	CPSF2	91	96.667	ENSTBEG00000004530	CPSF2	94	96.667	Tupaia_belangeri
ENSAPLG00000006330	CPSF2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSAPLG00000006330	CPSF2	100	96.178	ENSUAMG00000028071	CPSF2	100	96.178	Ursus_americanus
ENSAPLG00000006330	CPSF2	100	96.178	ENSUMAG00000005029	CPSF2	100	96.178	Ursus_maritimus
ENSAPLG00000006330	CPSF2	99	96.046	ENSVPAG00000003503	CPSF2	100	96.046	Vicugna_pacos
ENSAPLG00000006330	CPSF2	100	96.051	ENSVVUG00000024642	CPSF2	100	96.051	Vulpes_vulpes
ENSAPLG00000006330	CPSF2	100	91.847	ENSXETG00000010289	cpsf2	100	91.847	Xenopus_tropicalis
ENSAPLG00000006330	CPSF2	100	85.443	ENSXCOG00000001764	cpsf2	100	85.443	Xiphophorus_couchianus
ENSAPLG00000006330	CPSF2	100	85.570	ENSXMAG00000017048	cpsf2	100	85.570	Xiphophorus_maculatus