EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000006355 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 14666 bases
Position: chrKB743098.1:247043-261708
Accession: 101804703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000005971	RRM_5	PF13893.6	4.3e-07	1	1
ENSAPLP00000005971	RRM_1	PF00076.22	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006607	-	2469	XM_005019533	ENSAPLP00000005971	823 (aa)	XP_005019590	U3IFE9

Gene Model

Click here to download ENSAPLG00000006355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000006355	-	100	77.950	ENSAPLG00000005780	-	96	78.546

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000006355	-	99	64.839	ENSG00000160633	SAFB	89	63.528	Homo_sapiens
ENSAPLG00000006355	-	96	50.436	ENSAPOG00000022508	safb	59	45.387	Acanthochromis_polyacanthus
ENSAPLG00000006355	-	69	60.720	ENSAMEG00000012254	SAFB	60	62.956	Ailuropoda_melanoleuca
ENSAPLG00000006355	-	99	47.387	ENSACIG00000006247	safb	65	44.640	Amphilophus_citrinellus
ENSAPLG00000006355	-	96	50.185	ENSAOCG00000006308	safb	62	46.055	Amphiprion_ocellaris
ENSAPLG00000006355	-	96	50.310	ENSAPEG00000023342	safb	59	46.055	Amphiprion_percula
ENSAPLG00000006355	-	99	49.526	ENSATEG00000004998	safb	59	45.971	Anabas_testudineus
ENSAPLG00000006355	-	99	64.839	ENSANAG00000028821	SAFB	89	63.290	Aotus_nancymaae
ENSAPLG00000006355	-	96	50.062	ENSACLG00000001926	safb	58	45.387	Astatotilapia_calliptera
ENSAPLG00000006355	-	96	51.241	ENSAMXG00000018154	safb	58	47.874	Astyanax_mexicanus
ENSAPLG00000006355	-	99	63.820	ENSBTAG00000007875	SAFB	60	62.182	Bos_taurus
ENSAPLG00000006355	-	82	67.103	ENSCJAG00000017081	SAFB	93	67.437	Callithrix_jacchus
ENSAPLG00000006355	-	99	63.886	ENSCAFG00000018803	SAFB	78	63.734	Canis_familiaris
ENSAPLG00000006355	-	99	63.886	ENSCAFG00020018943	SAFB	89	63.734	Canis_lupus_dingo
ENSAPLG00000006355	-	99	63.464	ENSCHIG00000007262	SAFB	65	65.248	Capra_hircus
ENSAPLG00000006355	-	83	49.932	ENSCAPG00000012121	SAFB	74	58.392	Cavia_aperea
ENSAPLG00000006355	-	65	57.391	ENSCPOG00000026322	SAFB	90	60.976	Cavia_porcellus
ENSAPLG00000006355	-	99	64.958	ENSCCAG00000020193	SAFB	89	63.051	Cebus_capucinus
ENSAPLG00000006355	-	99	64.839	ENSCATG00000029994	SAFB	89	63.409	Cercocebus_atys
ENSAPLG00000006355	-	99	63.626	ENSCLAG00000007734	SAFB	90	63.626	Chinchilla_lanigera
ENSAPLG00000006355	-	99	64.839	ENSCSAG00000009949	SAFB	89	63.409	Chlorocebus_sabaeus
ENSAPLG00000006355	-	91	56.494	ENSCHOG00000003208	SAFB	88	56.477	Choloepus_hoffmanni
ENSAPLG00000006355	-	99	73.761	ENSCPBG00000010928	-	96	74.545	Chrysemys_picta_bellii
ENSAPLG00000006355	-	98	79.532	ENSCPBG00000010936	-	96	79.649	Chrysemys_picta_bellii
ENSAPLG00000006355	-	95	72.941	ENSCANG00000004774	-	87	72.941	Colobus_angolensis_palliatus
ENSAPLG00000006355	-	65	53.299	ENSCGRG00001002254	Safb	91	58.068	Cricetulus_griseus_chok1gshd
ENSAPLG00000006355	-	62	52.273	ENSCGRG00000011529	Safb	93	56.876	Cricetulus_griseus_crigri
ENSAPLG00000006355	-	99	45.652	ENSCSEG00000019870	safb	59	42.301	Cynoglossus_semilaevis
ENSAPLG00000006355	-	98	48.329	ENSDARG00000020467	safb	59	45.781	Danio_rerio
ENSAPLG00000006355	-	99	63.139	ENSDNOG00000015746	SAFB	95	61.252	Dasypus_novemcinctus
ENSAPLG00000006355	-	65	60.035	ENSDORG00000016200	Safb	62	60.000	Dipodomys_ordii
ENSAPLG00000006355	-	67	66.512	ENSETEG00000018679	SAFB	67	66.509	Echinops_telfairi
ENSAPLG00000006355	-	99	61.566	ENSEASG00005023019	SAFB	89	61.684	Equus_asinus_asinus
ENSAPLG00000006355	-	99	63.409	ENSECAG00000018659	SAFB	80	61.979	Equus_caballus
ENSAPLG00000006355	-	99	49.470	ENSELUG00000022327	safb	61	48.000	Esox_lucius
ENSAPLG00000006355	-	99	64.839	ENSFCAG00000011835	SAFB	89	63.377	Felis_catus
ENSAPLG00000006355	-	96	83.353	ENSFALG00000013881	-	96	82.938	Ficedula_albicollis
ENSAPLG00000006355	-	100	75.000	ENSFALG00000013882	-	82	74.880	Ficedula_albicollis
ENSAPLG00000006355	-	99	68.675	ENSFDAG00000020306	SAFB	89	68.675	Fukomys_damarensis
ENSAPLG00000006355	-	100	43.550	ENSGMOG00000014280	safb	58	41.667	Gadus_morhua
ENSAPLG00000006355	-	100	75.416	ENSGALG00000013365	-	89	76.407	Gallus_gallus
ENSAPLG00000006355	-	100	85.928	ENSGALG00000001948	-	90	85.928	Gallus_gallus
ENSAPLG00000006355	-	100	48.179	ENSGACG00000011385	safb	60	44.526	Gasterosteus_aculeatus
ENSAPLG00000006355	-	77	73.511	ENSGAGG00000017702	-	95	71.944	Gopherus_agassizii
ENSAPLG00000006355	-	99	79.118	ENSGAGG00000008424	-	93	79.744	Gopherus_agassizii
ENSAPLG00000006355	-	99	64.124	ENSGGOG00000015109	SAFB	89	63.647	Gorilla_gorilla
ENSAPLG00000006355	-	99	44.632	ENSHBUG00000009218	safb	62	43.043	Haplochromis_burtoni
ENSAPLG00000006355	-	65	59.201	ENSHGLG00000015883	SAFB	90	62.105	Heterocephalus_glaber_female
ENSAPLG00000006355	-	65	59.965	ENSHGLG00100004228	SAFB	66	60.106	Heterocephalus_glaber_male
ENSAPLG00000006355	-	94	46.289	ENSHCOG00000001705	safb	63	41.230	Hippocampus_comes
ENSAPLG00000006355	-	68	59.859	ENSIPUG00000024869	safb2	58	44.954	Ictalurus_punctatus
ENSAPLG00000006355	-	65	61.687	ENSSTOG00000002783	SAFB	96	62.631	Ictidomys_tridecemlineatus
ENSAPLG00000006355	-	99	60.805	ENSJJAG00000009021	Safb	90	60.764	Jaculus_jaculus
ENSAPLG00000006355	-	96	49.630	ENSKMAG00000022308	safb	59	44.241	Kryptolebias_marmoratus
ENSAPLG00000006355	-	99	48.772	ENSLBEG00000006015	safb	59	45.338	Labrus_bergylta
ENSAPLG00000006355	-	100	57.937	ENSLACG00000018090	SAFB	91	57.565	Latimeria_chalumnae
ENSAPLG00000006355	-	100	54.653	ENSLOCG00000003613	safb	69	48.469	Lepisosteus_oculatus
ENSAPLG00000006355	-	99	63.895	ENSLAFG00000003840	SAFB	90	63.658	Loxodonta_africana
ENSAPLG00000006355	-	99	64.839	ENSMFAG00000003885	SAFB	89	63.051	Macaca_fascicularis
ENSAPLG00000006355	-	99	64.839	ENSMMUG00000017970	SAFB	89	63.766	Macaca_mulatta
ENSAPLG00000006355	-	99	62.336	ENSMNEG00000035637	SAFB	89	61.979	Macaca_nemestrina
ENSAPLG00000006355	-	99	61.383	ENSMLEG00000038637	SAFB	89	59.555	Mandrillus_leucophaeus
ENSAPLG00000006355	-	100	49.063	ENSMAMG00000003357	safb	54	43.986	Mastacembelus_armatus
ENSAPLG00000006355	-	96	50.123	ENSMZEG00005009120	safb	60	45.826	Maylandia_zebra
ENSAPLG00000006355	-	100	76.647	ENSMGAG00000001101	-	93	76.766	Meleagris_gallopavo
ENSAPLG00000006355	-	91	76.160	ENSMGAG00000001051	-	92	75.804	Meleagris_gallopavo
ENSAPLG00000006355	-	84	56.259	ENSMICG00000046795	-	68	57.278	Microcebus_murinus
ENSAPLG00000006355	-	99	63.962	ENSMICG00000008739	-	89	63.007	Microcebus_murinus
ENSAPLG00000006355	-	65	54.467	ENSMOCG00000014040	Safb	90	58.933	Microtus_ochrogaster
ENSAPLG00000006355	-	100	65.258	ENSMODG00000001236	SAFB	90	64.202	Monodelphis_domestica
ENSAPLG00000006355	-	99	49.238	ENSMALG00000020330	safb	63	43.863	Monopterus_albus
ENSAPLG00000006355	-	65	55.459	MGP_CAROLIEiJ_G0021780	Safb	90	59.096	Mus_caroli
ENSAPLG00000006355	-	65	55.633	ENSMUSG00000071054	Safb	90	59.212	Mus_musculus
ENSAPLG00000006355	-	99	59.722	MGP_PahariEiJ_G0020769	Safb	90	58.333	Mus_pahari
ENSAPLG00000006355	-	99	64.362	ENSMPUG00000006123	SAFB	84	63.496	Mustela_putorius_furo
ENSAPLG00000006355	-	99	65.279	ENSMLUG00000001081	SAFB	89	63.853	Myotis_lucifugus
ENSAPLG00000006355	-	99	58.796	ENSNGAG00000019882	Safb	90	57.176	Nannospalax_galili
ENSAPLG00000006355	-	99	64.946	ENSNLEG00000013551	SAFB	93	63.145	Nomascus_leucogenys
ENSAPLG00000006355	-	65	59.675	ENSOPRG00000011561	-	99	61.131	Ochotona_princeps
ENSAPLG00000006355	-	65	59.825	ENSODEG00000014838	SAFB	90	62.266	Octodon_degus
ENSAPLG00000006355	-	96	50.305	ENSONIG00000002318	safb	60	46.237	Oreochromis_niloticus
ENSAPLG00000006355	-	97	58.191	ENSOCUG00000014628	SAFB	63	60.229	Oryctolagus_cuniculus
ENSAPLG00000006355	-	96	47.250	ENSORLG00000016989	safb	59	41.924	Oryzias_latipes
ENSAPLG00000006355	-	99	44.364	ENSORLG00020000404	safb	60	42.884	Oryzias_latipes_hni
ENSAPLG00000006355	-	99	46.707	ENSORLG00015010733	safb	60	42.105	Oryzias_latipes_hsok
ENSAPLG00000006355	-	96	47.414	ENSOMEG00000009066	safb	60	41.788	Oryzias_melastigma
ENSAPLG00000006355	-	99	60.429	ENSOGAG00000027769	SAFB	89	62.470	Otolemur_garnettii
ENSAPLG00000006355	-	99	60.261	ENSOARG00000007662	-	61	61.733	Ovis_aries
ENSAPLG00000006355	-	86	58.872	ENSOARG00000007856	-	78	60.830	Ovis_aries
ENSAPLG00000006355	-	99	64.839	ENSPPAG00000035129	SAFB	89	62.932	Pan_paniscus
ENSAPLG00000006355	-	99	64.124	ENSPPRG00000017197	SAFB	89	63.258	Panthera_pardus
ENSAPLG00000006355	-	99	64.839	ENSPTRG00000010335	SAFB	89	62.932	Pan_troglodytes
ENSAPLG00000006355	-	99	64.720	ENSPANG00000007770	SAFB	89	63.051	Papio_anubis
ENSAPLG00000006355	-	96	51.937	ENSPKIG00000009902	safb	61	48.571	Paramormyrops_kingsleyae
ENSAPLG00000006355	-	100	81.818	ENSPSIG00000011679	-	96	82.290	Pelodiscus_sinensis
ENSAPLG00000006355	-	100	72.738	ENSPSIG00000009367	-	90	72.268	Pelodiscus_sinensis
ENSAPLG00000006355	-	65	55.208	ENSPEMG00000020428	Safb	90	59.302	Peromyscus_maniculatus_bairdii
ENSAPLG00000006355	-	61	67.913	ENSPCIG00000009504	-	99	68.047	Phascolarctos_cinereus
ENSAPLG00000006355	-	94	44.870	ENSPFOG00000007745	safb	67	41.459	Poecilia_formosa
ENSAPLG00000006355	-	99	64.839	ENSPPYG00000009428	SAFB	89	63.409	Pongo_abelii
ENSAPLG00000006355	-	99	60.402	ENSPCAG00000006475	SAFB	89	59.338	Procavia_capensis
ENSAPLG00000006355	-	99	61.217	ENSPCOG00000014090	SAFB	60	61.931	Propithecus_coquereli
ENSAPLG00000006355	-	99	59.237	ENSPVAG00000004913	SAFB	89	57.075	Pteropus_vampyrus
ENSAPLG00000006355	-	99	49.825	ENSPNAG00000021838	safb	59	46.809	Pygocentrus_nattereri
ENSAPLG00000006355	-	65	55.536	ENSRNOG00000050543	Safb	97	57.725	Rattus_norvegicus
ENSAPLG00000006355	-	99	57.126	ENSRBIG00000042509	SAFB	87	60.759	Rhinopithecus_bieti
ENSAPLG00000006355	-	99	64.720	ENSRROG00000029278	SAFB	89	62.932	Rhinopithecus_roxellana
ENSAPLG00000006355	-	99	64.958	ENSSBOG00000026291	SAFB	89	63.290	Saimiri_boliviensis_boliviensis
ENSAPLG00000006355	-	99	52.386	ENSSFOG00015008156	safb	61	48.925	Scleropages_formosus
ENSAPLG00000006355	-	100	47.775	ENSSMAG00000009316	safb	59	46.182	Scophthalmus_maximus
ENSAPLG00000006355	-	99	45.868	ENSSDUG00000009652	safb	63	41.935	Seriola_dumerili
ENSAPLG00000006355	-	99	46.081	ENSSLDG00000001670	safb	59	43.486	Seriola_lalandi_dorsalis
ENSAPLG00000006355	-	65	60.329	ENSSARG00000010475	SAFB	96	59.664	Sorex_araneus
ENSAPLG00000006355	-	91	74.149	ENSSPUG00000009820	-	98	75.063	Sphenodon_punctatus
ENSAPLG00000006355	-	63	65.085	ENSSPUG00000009747	-	100	62.836	Sphenodon_punctatus
ENSAPLG00000006355	-	99	44.096	ENSSPAG00000015682	safb	62	42.779	Stegastes_partitus
ENSAPLG00000006355	-	99	63.647	ENSSSCG00000013522	SAFB	91	63.014	Sus_scrofa
ENSAPLG00000006355	-	96	85.909	ENSTGUG00000000489	-	93	85.909	Taeniopygia_guttata
ENSAPLG00000006355	-	99	71.663	ENSTGUG00000000502	-	93	72.143	Taeniopygia_guttata
ENSAPLG00000006355	-	96	47.232	ENSTRUG00000003567	safb	59	42.831	Takifugu_rubripes
ENSAPLG00000006355	-	94	44.485	ENSTNIG00000015470	safb	68	41.043	Tetraodon_nigroviridis
ENSAPLG00000006355	-	91	64.016	ENSTTRG00000013588	SAFB	82	62.451	Tursiops_truncatus
ENSAPLG00000006355	-	83	62.040	ENSUAMG00000024543	SAFB	86	63.889	Ursus_americanus
ENSAPLG00000006355	-	79	71.818	ENSUMAG00000009734	SAFB	76	71.818	Ursus_maritimus
ENSAPLG00000006355	-	79	71.560	ENSVPAG00000012043	SAFB	63	71.560	Vicugna_pacos
ENSAPLG00000006355	-	99	63.766	ENSVVUG00000013720	SAFB	78	63.615	Vulpes_vulpes
ENSAPLG00000006355	-	65	50.460	ENSXETG00000008755	safb	93	55.865	Xenopus_tropicalis