EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSAPLG00000006395 (Gene tree)
Gene ID: -
Gene Symbol: CIRBP
Alias: -
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 3968 bases
Position: chrKB743437.1:148369-152336
Accession: 101803979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006008	RRM_1	PF00076.22	4.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006644	CIRBP-201	2674	XM_005023051	ENSAPLP00000006008	172 (aa)	XP_005023108	U3IFI6

Gene Model

Click here to download ENSAPLG00000006395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000006395	CIRBP	53	38.889	ENSAPLG00000002634	ELAVL4	62	38.889
ENSAPLG00000006395	CIRBP	53	38.043	ENSAPLG00000014522	-	56	38.356
ENSAPLG00000006395	CIRBP	51	37.500	ENSAPLG00000010429	ELAVL2	57	37.500
ENSAPLG00000006395	CIRBP	53	38.542	ENSAPLG00000011849	HNRNPD	52	40.260
ENSAPLG00000006395	CIRBP	52	33.333	ENSAPLG00000003139	ELAVL1	75	33.333
ENSAPLG00000006395	CIRBP	53	36.957	ENSAPLG00000013779	-	52	38.356
ENSAPLG00000006395	CIRBP	53	30.108	ENSAPLG00000011774	HNRNPDL	55	32.468