EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000006534 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 8180 bases
Position: chrKB744204.1:1057476-1065655
Accession: 101797016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006166	PRP4	PF08799.11	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000006807	PRPF4-201	1611	XM_005027548	ENSAPLP00000006166	536 (aa)	XP_005027605	U3IFZ4

Gene Model

Click here to download ENSAPLG00000006534's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000006534	PRPF4	55	31.250	ENSAPLG00000007756	POC1A	73	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000006534	PRPF4	96	90.253	ENSG00000136875	PRPF4	100	89.060	Homo_sapiens
ENSAPLG00000006534	PRPF4	94	77.963	ENSAPOG00000014132	prpf4	98	77.963	Acanthochromis_polyacanthus
ENSAPLG00000006534	PRPF4	96	90.625	ENSAMEG00000013048	PRPF4	96	90.625	Ailuropoda_melanoleuca
ENSAPLG00000006534	PRPF4	94	77.515	ENSACIG00000005579	prpf4	99	77.515	Amphilophus_citrinellus
ENSAPLG00000006534	PRPF4	94	76.575	ENSAOCG00000005457	prpf4	99	76.575	Amphiprion_ocellaris
ENSAPLG00000006534	PRPF4	94	76.378	ENSAPEG00000000776	prpf4	99	76.378	Amphiprion_percula
ENSAPLG00000006534	PRPF4	94	76.726	ENSATEG00000023013	prpf4	99	76.726	Anabas_testudineus
ENSAPLG00000006534	PRPF4	95	91.406	ENSACAG00000015110	PRPF4	98	91.406	Anolis_carolinensis
ENSAPLG00000006534	PRPF4	98	88.952	ENSANAG00000022464	PRPF4	97	88.952	Aotus_nancymaae
ENSAPLG00000006534	PRPF4	94	76.923	ENSACLG00000019031	prpf4	99	76.923	Astatotilapia_calliptera
ENSAPLG00000006534	PRPF4	94	61.804	ENSAMXG00000006756	prpf4	99	73.069	Astyanax_mexicanus
ENSAPLG00000006534	PRPF4	97	89.443	ENSBTAG00000004571	PRPF4	100	89.443	Bos_taurus
ENSAPLG00000006534	PRPF4	85	44.956	WBGene00007972	prp-4	91	44.956	Caenorhabditis_elegans
ENSAPLG00000006534	PRPF4	96	90.448	ENSCJAG00000017856	PRPF4	98	90.448	Callithrix_jacchus
ENSAPLG00000006534	PRPF4	97	89.080	ENSCAFG00000003224	PRPF4	97	89.080	Canis_familiaris
ENSAPLG00000006534	PRPF4	96	90.625	ENSCAFG00020022637	PRPF4	99	90.625	Canis_lupus_dingo
ENSAPLG00000006534	PRPF4	96	90.448	ENSCHIG00000024648	-	98	90.448	Capra_hircus
ENSAPLG00000006534	PRPF4	99	88.113	ENSTSYG00000010366	PRPF4	100	89.060	Carlito_syrichta
ENSAPLG00000006534	PRPF4	76	83.698	ENSCAPG00000008935	PRPF4	97	82.339	Cavia_aperea
ENSAPLG00000006534	PRPF4	96	84.766	ENSCPOG00000014729	-	98	84.766	Cavia_porcellus
ENSAPLG00000006534	PRPF4	97	88.868	ENSCPOG00000010747	-	100	88.868	Cavia_porcellus
ENSAPLG00000006534	PRPF4	99	87.992	ENSCCAG00000028990	PRPF4	100	89.251	Cebus_capucinus
ENSAPLG00000006534	PRPF4	98	88.952	ENSCATG00000021552	PRPF4	100	89.251	Cercocebus_atys
ENSAPLG00000006534	PRPF4	97	89.060	ENSCLAG00000013448	PRPF4	100	89.060	Chinchilla_lanigera
ENSAPLG00000006534	PRPF4	84	90.265	ENSCHOG00000007233	PRPF4	100	90.265	Choloepus_hoffmanni
ENSAPLG00000006534	PRPF4	98	91.048	ENSCPBG00000019136	PRPF4	75	91.048	Chrysemys_picta_bellii
ENSAPLG00000006534	PRPF4	92	58.954	ENSCING00000001299	-	95	58.954	Ciona_intestinalis
ENSAPLG00000006534	PRPF4	92	59.514	ENSCSAVG00000009178	-	99	59.957	Ciona_savignyi
ENSAPLG00000006534	PRPF4	98	88.952	ENSCANG00000003246	PRPF4	100	89.251	Colobus_angolensis_palliatus
ENSAPLG00000006534	PRPF4	97	88.868	ENSCGRG00001016992	Prpf4	100	88.868	Cricetulus_griseus_chok1gshd
ENSAPLG00000006534	PRPF4	97	88.868	ENSCGRG00000017560	Prpf4	100	88.868	Cricetulus_griseus_crigri
ENSAPLG00000006534	PRPF4	94	76.832	ENSCSEG00000020451	prpf4	99	76.832	Cynoglossus_semilaevis
ENSAPLG00000006534	PRPF4	94	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSAPLG00000006534	PRPF4	97	89.080	ENSDNOG00000013203	PRPF4	100	89.080	Dasypus_novemcinctus
ENSAPLG00000006534	PRPF4	97	89.251	ENSDORG00000026275	Prpf4	100	89.251	Dipodomys_ordii
ENSAPLG00000006534	PRPF4	85	56.957	FBgn0036733	U4-U6-60K	97	51.391	Drosophila_melanogaster
ENSAPLG00000006534	PRPF4	96	89.689	ENSETEG00000020389	PRPF4	98	89.689	Echinops_telfairi
ENSAPLG00000006534	PRPF4	94	72.172	ENSEBUG00000015229	prpf4	88	72.851	Eptatretus_burgeri
ENSAPLG00000006534	PRPF4	97	89.251	ENSEASG00005022678	PRPF4	100	89.251	Equus_asinus_asinus
ENSAPLG00000006534	PRPF4	97	89.251	ENSECAG00000007072	PRPF4	100	89.251	Equus_caballus
ENSAPLG00000006534	PRPF4	82	93.305	ENSEEUG00000007480	PRPF4	98	70.953	Erinaceus_europaeus
ENSAPLG00000006534	PRPF4	94	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSAPLG00000006534	PRPF4	96	90.448	ENSFCAG00000005514	PRPF4	98	90.448	Felis_catus
ENSAPLG00000006534	PRPF4	96	95.991	ENSFALG00000005423	PRPF4	90	93.333	Ficedula_albicollis
ENSAPLG00000006534	PRPF4	97	89.251	ENSFDAG00000005839	PRPF4	100	89.251	Fukomys_damarensis
ENSAPLG00000006534	PRPF4	94	76.923	ENSFHEG00000001300	prpf4	99	76.923	Fundulus_heteroclitus
ENSAPLG00000006534	PRPF4	98	96.952	ENSGALG00000008857	PRPF4	97	96.952	Gallus_gallus
ENSAPLG00000006534	PRPF4	60	73.006	ENSGAFG00000012164	prpf4	67	73.006	Gambusia_affinis
ENSAPLG00000006534	PRPF4	94	69.488	ENSGACG00000015476	prpf4	99	69.488	Gasterosteus_aculeatus
ENSAPLG00000006534	PRPF4	98	91.048	ENSGAGG00000025029	PRPF4	97	91.048	Gopherus_agassizii
ENSAPLG00000006534	PRPF4	98	88.762	ENSGGOG00000006943	PRPF4	100	89.060	Gorilla_gorilla
ENSAPLG00000006534	PRPF4	94	76.726	ENSHBUG00000000562	prpf4	99	76.726	Haplochromis_burtoni
ENSAPLG00000006534	PRPF4	97	74.379	ENSHGLG00000016628	-	100	75.143	Heterocephalus_glaber_female
ENSAPLG00000006534	PRPF4	97	89.060	ENSHGLG00000015191	PRPF4	100	89.060	Heterocephalus_glaber_female
ENSAPLG00000006534	PRPF4	97	71.977	ENSHGLG00000003838	-	100	71.977	Heterocephalus_glaber_female
ENSAPLG00000006534	PRPF4	97	71.977	ENSHGLG00100005571	-	100	71.977	Heterocephalus_glaber_male
ENSAPLG00000006534	PRPF4	94	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSAPLG00000006534	PRPF4	97	88.676	ENSSTOG00000027833	PRPF4	100	88.676	Ictidomys_tridecemlineatus
ENSAPLG00000006534	PRPF4	97	89.060	ENSJJAG00000008838	Prpf4	100	89.060	Jaculus_jaculus
ENSAPLG00000006534	PRPF4	94	76.726	ENSKMAG00000013236	prpf4	99	76.726	Kryptolebias_marmoratus
ENSAPLG00000006534	PRPF4	94	76.634	ENSLBEG00000020611	prpf4	99	76.634	Labrus_bergylta
ENSAPLG00000006534	PRPF4	95	79.492	ENSLACG00000016317	PRPF4	98	79.492	Latimeria_chalumnae
ENSAPLG00000006534	PRPF4	94	81.188	ENSLOCG00000000581	prpf4	99	81.188	Lepisosteus_oculatus
ENSAPLG00000006534	PRPF4	96	89.729	ENSLAFG00000018225	PRPF4	99	89.729	Loxodonta_africana
ENSAPLG00000006534	PRPF4	98	88.762	ENSMFAG00000039397	PRPF4	100	89.060	Macaca_fascicularis
ENSAPLG00000006534	PRPF4	94	90.909	ENSMMUG00000005844	PRPF4	100	89.251	Macaca_mulatta
ENSAPLG00000006534	PRPF4	94	80.435	ENSMNEG00000033737	PRPF4	100	79.079	Macaca_nemestrina
ENSAPLG00000006534	PRPF4	98	88.952	ENSMLEG00000040284	PRPF4	100	89.251	Mandrillus_leucophaeus
ENSAPLG00000006534	PRPF4	94	76.331	ENSMAMG00000020141	prpf4	99	76.331	Mastacembelus_armatus
ENSAPLG00000006534	PRPF4	94	76.923	ENSMZEG00005023205	prpf4	99	76.923	Maylandia_zebra
ENSAPLG00000006534	PRPF4	95	98.627	ENSMGAG00000001796	PRPF4	95	98.627	Meleagris_gallopavo
ENSAPLG00000006534	PRPF4	95	90.196	ENSMAUG00000018022	Prpf4	100	88.676	Mesocricetus_auratus
ENSAPLG00000006534	PRPF4	99	88.158	ENSMICG00000015022	PRPF4	98	90.253	Microcebus_murinus
ENSAPLG00000006534	PRPF4	97	88.484	ENSMOCG00000018273	Prpf4	100	88.484	Microtus_ochrogaster
ENSAPLG00000006534	PRPF4	94	75.446	ENSMMOG00000021177	prpf4	99	75.446	Mola_mola
ENSAPLG00000006534	PRPF4	97	88.610	ENSMODG00000004444	-	99	88.610	Monodelphis_domestica
ENSAPLG00000006534	PRPF4	99	87.242	ENSMODG00000025096	-	99	87.242	Monodelphis_domestica
ENSAPLG00000006534	PRPF4	94	77.120	ENSMALG00000013624	prpf4	99	77.120	Monopterus_albus
ENSAPLG00000006534	PRPF4	97	88.676	MGP_CAROLIEiJ_G0026078	Prpf4	100	88.676	Mus_caroli
ENSAPLG00000006534	PRPF4	97	88.676	ENSMUSG00000066148	Prpf4	100	88.676	Mus_musculus
ENSAPLG00000006534	PRPF4	97	88.484	MGP_PahariEiJ_G0028413	Prpf4	100	88.484	Mus_pahari
ENSAPLG00000006534	PRPF4	97	88.676	MGP_SPRETEiJ_G0027042	Prpf4	100	88.676	Mus_spretus
ENSAPLG00000006534	PRPF4	96	90.625	ENSMPUG00000007883	PRPF4	98	90.625	Mustela_putorius_furo
ENSAPLG00000006534	PRPF4	98	88.952	ENSMLUG00000015309	-	98	88.952	Myotis_lucifugus
ENSAPLG00000006534	PRPF4	98	87.238	ENSMLUG00000008626	-	98	87.238	Myotis_lucifugus
ENSAPLG00000006534	PRPF4	97	83.877	ENSNGAG00000000468	Prpf4	100	83.877	Nannospalax_galili
ENSAPLG00000006534	PRPF4	94	77.120	ENSNBRG00000007972	prpf4	99	77.120	Neolamprologus_brichardi
ENSAPLG00000006534	PRPF4	98	88.952	ENSNLEG00000016647	PRPF4	100	89.251	Nomascus_leucogenys
ENSAPLG00000006534	PRPF4	95	89.824	ENSMEUG00000013256	PRPF4	99	89.824	Notamacropus_eugenii
ENSAPLG00000006534	PRPF4	96	90.448	ENSOPRG00000005302	PRPF4	99	89.595	Ochotona_princeps
ENSAPLG00000006534	PRPF4	97	89.251	ENSODEG00000018147	PRPF4	100	89.251	Octodon_degus
ENSAPLG00000006534	PRPF4	94	76.923	ENSONIG00000012671	prpf4	99	76.923	Oreochromis_niloticus
ENSAPLG00000006534	PRPF4	97	89.443	ENSOCUG00000005046	PRPF4	100	89.443	Oryctolagus_cuniculus
ENSAPLG00000006534	PRPF4	94	75.842	ENSORLG00000019641	prpf4	99	75.842	Oryzias_latipes
ENSAPLG00000006534	PRPF4	94	75.842	ENSORLG00020019438	prpf4	99	75.842	Oryzias_latipes_hni
ENSAPLG00000006534	PRPF4	94	75.523	ENSOMEG00000020941	prpf4	99	75.523	Oryzias_melastigma
ENSAPLG00000006534	PRPF4	99	84.499	ENSOGAG00000007802	PRPF4	99	84.499	Otolemur_garnettii
ENSAPLG00000006534	PRPF4	98	89.143	ENSOARG00000006319	PRPF4	97	89.143	Ovis_aries
ENSAPLG00000006534	PRPF4	98	88.762	ENSPPAG00000041797	PRPF4	100	89.060	Pan_paniscus
ENSAPLG00000006534	PRPF4	97	89.251	ENSPPRG00000014360	PRPF4	100	89.251	Panthera_pardus
ENSAPLG00000006534	PRPF4	97	89.251	ENSPTIG00000009574	PRPF4	100	89.251	Panthera_tigris_altaica
ENSAPLG00000006534	PRPF4	98	88.762	ENSPTRG00000021274	PRPF4	98	90.253	Pan_troglodytes
ENSAPLG00000006534	PRPF4	98	88.762	ENSPANG00000025776	PRPF4	97	88.762	Papio_anubis
ENSAPLG00000006534	PRPF4	94	81.782	ENSPKIG00000017259	prpf4	99	81.782	Paramormyrops_kingsleyae
ENSAPLG00000006534	PRPF4	96	92.203	ENSPSIG00000010713	PRPF4	90	92.203	Pelodiscus_sinensis
ENSAPLG00000006534	PRPF4	94	58.627	ENSPMGG00000000997	prpf4	98	58.256	Periophthalmus_magnuspinnatus
ENSAPLG00000006534	PRPF4	97	88.868	ENSPEMG00000024115	Prpf4	100	88.868	Peromyscus_maniculatus_bairdii
ENSAPLG00000006534	PRPF4	95	89.824	ENSPCIG00000003821	PRPF4	99	89.824	Phascolarctos_cinereus
ENSAPLG00000006534	PRPF4	94	70.059	ENSPFOG00000013524	prpf4	99	72.699	Poecilia_formosa
ENSAPLG00000006534	PRPF4	82	70.536	ENSPLAG00000011620	prpf4	99	69.419	Poecilia_latipinna
ENSAPLG00000006534	PRPF4	92	73.512	ENSPMEG00000006813	prpf4	99	73.512	Poecilia_mexicana
ENSAPLG00000006534	PRPF4	96	90.078	ENSPCAG00000002561	PRPF4	100	90.078	Procavia_capensis
ENSAPLG00000006534	PRPF4	98	88.762	ENSPCOG00000011975	PRPF4	100	89.060	Propithecus_coquereli
ENSAPLG00000006534	PRPF4	96	87.135	ENSPVAG00000004708	PRPF4	98	87.135	Pteropus_vampyrus
ENSAPLG00000006534	PRPF4	94	76.923	ENSPNYG00000008013	prpf4	99	76.923	Pundamilia_nyererei
ENSAPLG00000006534	PRPF4	94	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSAPLG00000006534	PRPF4	97	88.484	ENSRNOG00000014777	Prpf4	100	88.484	Rattus_norvegicus
ENSAPLG00000006534	PRPF4	98	88.952	ENSRBIG00000040221	PRPF4	100	89.251	Rhinopithecus_bieti
ENSAPLG00000006534	PRPF4	98	88.952	ENSRROG00000040240	PRPF4	100	89.251	Rhinopithecus_roxellana
ENSAPLG00000006534	PRPF4	97	88.996	ENSSHAG00000017658	PRPF4	99	88.996	Sarcophilus_harrisii
ENSAPLG00000006534	PRPF4	94	82.970	ENSSFOG00015008963	prpf4	99	82.970	Scleropages_formosus
ENSAPLG00000006534	PRPF4	94	76.529	ENSSMAG00000008889	prpf4	99	76.529	Scophthalmus_maximus
ENSAPLG00000006534	PRPF4	94	73.663	ENSSDUG00000022083	prpf4	98	73.861	Seriola_dumerili
ENSAPLG00000006534	PRPF4	94	73.861	ENSSLDG00000008115	prpf4	98	74.059	Seriola_lalandi_dorsalis
ENSAPLG00000006534	PRPF4	96	91.992	ENSSPUG00000015582	PRPF4	98	91.992	Sphenodon_punctatus
ENSAPLG00000006534	PRPF4	94	71.373	ENSSPAG00000011286	prpf4	99	71.373	Stegastes_partitus
ENSAPLG00000006534	PRPF4	97	89.251	ENSSSCG00000024648	PRPF4	100	89.251	Sus_scrofa
ENSAPLG00000006534	PRPF4	95	95.098	ENSTGUG00000002623	PRPF4	100	97.342	Taeniopygia_guttata
ENSAPLG00000006534	PRPF4	94	75.889	ENSTRUG00000008853	prpf4	99	75.889	Takifugu_rubripes
ENSAPLG00000006534	PRPF4	94	76.238	ENSTNIG00000013250	prpf4	99	76.238	Tetraodon_nigroviridis
ENSAPLG00000006534	PRPF4	96	82.456	ENSTBEG00000000821	PRPF4	98	82.456	Tupaia_belangeri
ENSAPLG00000006534	PRPF4	79	93.023	ENSTTRG00000003246	PRPF4	85	93.023	Tursiops_truncatus
ENSAPLG00000006534	PRPF4	61	85.846	ENSUAMG00000018288	PRPF4	88	88.599	Ursus_americanus
ENSAPLG00000006534	PRPF4	96	90.039	ENSUMAG00000019375	PRPF4	98	90.039	Ursus_maritimus
ENSAPLG00000006534	PRPF4	96	90.643	ENSVPAG00000005281	PRPF4	99	89.788	Vicugna_pacos
ENSAPLG00000006534	PRPF4	97	88.190	ENSVVUG00000002476	PRPF4	99	90.495	Vulpes_vulpes
ENSAPLG00000006534	PRPF4	67	58.333	ENSXCOG00000006101	prpf4	93	60.000	Xiphophorus_couchianus
ENSAPLG00000006534	PRPF4	86	64.502	ENSXMAG00000002750	prpf4	99	65.286	Xiphophorus_maculatus