EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000006808 (Gene tree)
Gene ID: 101801146
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 30023 bases
Position: chrKB743308.1:14151-44173
Accession: 101801146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006427	TruB_N	PF01509.18	5.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000007072	TRUB1-201	1170	XM_005021978	ENSAPLP00000006427	278 (aa)	XP_005022035	R0LGW9

Gene Model

Click here to download ENSAPLG00000006808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000006808	TRUB1	99	75.636	ENSG00000165832	TRUB1	79	75.636	Homo_sapiens
ENSAPLG00000006808	TRUB1	87	68.852	ENSAPOG00000020565	trub1	91	67.857	Acanthochromis_polyacanthus
ENSAPLG00000006808	TRUB1	99	75.090	ENSAMEG00000014931	TRUB1	79	75.090	Ailuropoda_melanoleuca
ENSAPLG00000006808	TRUB1	87	64.754	ENSACIG00000003060	trub1	81	64.754	Amphilophus_citrinellus
ENSAPLG00000006808	TRUB1	87	68.852	ENSAOCG00000017188	trub1	89	68.852	Amphiprion_ocellaris
ENSAPLG00000006808	TRUB1	87	69.262	ENSAPEG00000015209	trub1	89	69.262	Amphiprion_percula
ENSAPLG00000006808	TRUB1	89	67.742	ENSATEG00000023291	trub1	88	67.742	Anabas_testudineus
ENSAPLG00000006808	TRUB1	96	72.761	ENSACAG00000009282	TRUB1	97	72.761	Anolis_carolinensis
ENSAPLG00000006808	TRUB1	99	75.636	ENSANAG00000022870	TRUB1	78	75.636	Aotus_nancymaae
ENSAPLG00000006808	TRUB1	93	67.433	ENSACLG00000000823	trub1	94	67.433	Astatotilapia_calliptera
ENSAPLG00000006808	TRUB1	95	64.662	ENSAMXG00000015845	trub1	89	64.662	Astyanax_mexicanus
ENSAPLG00000006808	TRUB1	97	75.735	ENSBTAG00000012955	TRUB1	77	75.735	Bos_taurus
ENSAPLG00000006808	TRUB1	99	75.636	ENSCJAG00000047815	TRUB1	78	75.636	Callithrix_jacchus
ENSAPLG00000006808	TRUB1	99	76.364	ENSCAFG00000011688	TRUB1	79	76.364	Canis_familiaris
ENSAPLG00000006808	TRUB1	99	76.364	ENSCAFG00020013237	TRUB1	79	76.364	Canis_lupus_dingo
ENSAPLG00000006808	TRUB1	97	75.735	ENSCHIG00000020884	TRUB1	81	75.735	Capra_hircus
ENSAPLG00000006808	TRUB1	99	74.909	ENSTSYG00000000446	TRUB1	78	74.909	Carlito_syrichta
ENSAPLG00000006808	TRUB1	82	67.249	ENSCAPG00000017088	TRUB1	89	67.249	Cavia_aperea
ENSAPLG00000006808	TRUB1	68	73.684	ENSCPOG00000030129	-	74	73.684	Cavia_porcellus
ENSAPLG00000006808	TRUB1	66	75.543	ENSCPOG00000040236	-	75	75.543	Cavia_porcellus
ENSAPLG00000006808	TRUB1	99	75.636	ENSCCAG00000028842	TRUB1	78	75.636	Cebus_capucinus
ENSAPLG00000006808	TRUB1	99	75.273	ENSCATG00000033431	TRUB1	79	75.273	Cercocebus_atys
ENSAPLG00000006808	TRUB1	67	73.797	ENSCLAG00000008664	TRUB1	75	74.457	Chinchilla_lanigera
ENSAPLG00000006808	TRUB1	99	75.636	ENSCSAG00000004891	TRUB1	79	75.636	Chlorocebus_sabaeus
ENSAPLG00000006808	TRUB1	99	65.455	ENSCHOG00000011931	TRUB1	79	65.455	Choloepus_hoffmanni
ENSAPLG00000006808	TRUB1	100	83.453	ENSCPBG00000003051	TRUB1	96	83.453	Chrysemys_picta_bellii
ENSAPLG00000006808	TRUB1	99	75.636	ENSCANG00000029445	TRUB1	79	75.636	Colobus_angolensis_palliatus
ENSAPLG00000006808	TRUB1	95	66.288	ENSCGRG00001010322	-	74	65.818	Cricetulus_griseus_chok1gshd
ENSAPLG00000006808	TRUB1	85	73.529	ENSCGRG00001016772	-	80	73.333	Cricetulus_griseus_chok1gshd
ENSAPLG00000006808	TRUB1	95	74.242	ENSCGRG00000010806	Trub1	84	73.818	Cricetulus_griseus_crigri
ENSAPLG00000006808	TRUB1	87	65.984	ENSCSEG00000011261	trub1	79	65.984	Cynoglossus_semilaevis
ENSAPLG00000006808	TRUB1	90	66.932	ENSCVAG00000008791	trub1	77	67.200	Cyprinodon_variegatus
ENSAPLG00000006808	TRUB1	99	63.139	ENSDARG00000053805	trub1	94	63.139	Danio_rerio
ENSAPLG00000006808	TRUB1	100	74.194	ENSDNOG00000001069	TRUB1	80	74.194	Dasypus_novemcinctus
ENSAPLG00000006808	TRUB1	95	75.758	ENSDORG00000010431	Trub1	79	75.273	Dipodomys_ordii
ENSAPLG00000006808	TRUB1	74	71.739	ENSETEG00000009183	TRUB1	60	68.966	Echinops_telfairi
ENSAPLG00000006808	TRUB1	99	76.000	ENSEASG00005014739	TRUB1	79	76.000	Equus_asinus_asinus
ENSAPLG00000006808	TRUB1	99	76.000	ENSECAG00000007177	TRUB1	79	76.000	Equus_caballus
ENSAPLG00000006808	TRUB1	99	65.827	ENSEEUG00000013993	TRUB1	77	65.827	Erinaceus_europaeus
ENSAPLG00000006808	TRUB1	87	69.262	ENSELUG00000000502	trub1	85	69.262	Esox_lucius
ENSAPLG00000006808	TRUB1	99	76.727	ENSFCAG00000031927	TRUB1	79	76.727	Felis_catus
ENSAPLG00000006808	TRUB1	86	89.540	ENSFALG00000002232	TRUB1	92	89.540	Ficedula_albicollis
ENSAPLG00000006808	TRUB1	67	75.401	ENSFDAG00000008140	TRUB1	75	76.087	Fukomys_damarensis
ENSAPLG00000006808	TRUB1	87	68.852	ENSFHEG00000004016	trub1	84	68.852	Fundulus_heteroclitus
ENSAPLG00000006808	TRUB1	100	91.727	ENSGALG00000009091	TRUB1	98	91.727	Gallus_gallus
ENSAPLG00000006808	TRUB1	85	66.807	ENSGAFG00000009193	trub1	84	66.807	Gambusia_affinis
ENSAPLG00000006808	TRUB1	70	68.041	ENSGACG00000015387	trub1	95	68.041	Gasterosteus_aculeatus
ENSAPLG00000006808	TRUB1	99	83.696	ENSGAGG00000009758	TRUB1	77	84.758	Gopherus_agassizii
ENSAPLG00000006808	TRUB1	99	76.000	ENSGGOG00000004583	TRUB1	79	76.000	Gorilla_gorilla
ENSAPLG00000006808	TRUB1	93	67.433	ENSHBUG00000016787	trub1	94	67.433	Haplochromis_burtoni
ENSAPLG00000006808	TRUB1	99	72.727	ENSHGLG00000015314	TRUB1	79	72.727	Heterocephalus_glaber_female
ENSAPLG00000006808	TRUB1	67	74.332	ENSHGLG00100009183	TRUB1	78	75.000	Heterocephalus_glaber_male
ENSAPLG00000006808	TRUB1	87	69.262	ENSHCOG00000017877	trub1	88	69.262	Hippocampus_comes
ENSAPLG00000006808	TRUB1	87	68.033	ENSIPUG00000017559	trub1	86	68.033	Ictalurus_punctatus
ENSAPLG00000006808	TRUB1	99	75.090	ENSSTOG00000003641	TRUB1	83	75.090	Ictidomys_tridecemlineatus
ENSAPLG00000006808	TRUB1	98	74.088	ENSJJAG00000011800	Trub1	81	74.088	Jaculus_jaculus
ENSAPLG00000006808	TRUB1	87	69.262	ENSKMAG00000006232	trub1	88	69.262	Kryptolebias_marmoratus
ENSAPLG00000006808	TRUB1	94	65.900	ENSLBEG00000026722	trub1	91	65.900	Labrus_bergylta
ENSAPLG00000006808	TRUB1	98	74.265	ENSLACG00000014885	TRUB1	91	74.265	Latimeria_chalumnae
ENSAPLG00000006808	TRUB1	96	70.677	ENSLOCG00000012979	trub1	91	70.677	Lepisosteus_oculatus
ENSAPLG00000006808	TRUB1	91	76.285	ENSLAFG00000015452	TRUB1	80	72.760	Loxodonta_africana
ENSAPLG00000006808	TRUB1	99	75.636	ENSMFAG00000031767	TRUB1	79	75.636	Macaca_fascicularis
ENSAPLG00000006808	TRUB1	99	75.636	ENSMMUG00000001902	TRUB1	79	75.636	Macaca_mulatta
ENSAPLG00000006808	TRUB1	99	71.273	ENSMNEG00000044646	TRUB1	78	71.273	Macaca_nemestrina
ENSAPLG00000006808	TRUB1	99	75.636	ENSMLEG00000042655	TRUB1	79	75.636	Mandrillus_leucophaeus
ENSAPLG00000006808	TRUB1	93	67.433	ENSMZEG00005024095	trub1	94	67.433	Maylandia_zebra
ENSAPLG00000006808	TRUB1	100	91.727	ENSMGAG00000011135	TRUB1	96	91.727	Meleagris_gallopavo
ENSAPLG00000006808	TRUB1	95	71.970	ENSMAUG00000011101	Trub1	81	71.636	Mesocricetus_auratus
ENSAPLG00000006808	TRUB1	99	76.000	ENSMICG00000016324	TRUB1	79	76.000	Microcebus_murinus
ENSAPLG00000006808	TRUB1	95	72.727	ENSMOCG00000017759	Trub1	83	72.364	Microtus_ochrogaster
ENSAPLG00000006808	TRUB1	97	79.630	ENSMODG00000009676	TRUB1	78	78.648	Monodelphis_domestica
ENSAPLG00000006808	TRUB1	96	72.285	MGP_CAROLIEiJ_G0023100	Trub1	81	71.898	Mus_caroli
ENSAPLG00000006808	TRUB1	96	71.536	ENSMUSG00000025086	Trub1	81	71.168	Mus_musculus
ENSAPLG00000006808	TRUB1	98	71.533	MGP_PahariEiJ_G0014588	Trub1	81	71.533	Mus_pahari
ENSAPLG00000006808	TRUB1	96	71.536	MGP_SPRETEiJ_G0024021	Trub1	81	71.168	Mus_spretus
ENSAPLG00000006808	TRUB1	99	76.364	ENSMPUG00000003556	TRUB1	79	76.364	Mustela_putorius_furo
ENSAPLG00000006808	TRUB1	99	76.000	ENSMLUG00000017686	TRUB1	81	76.000	Myotis_lucifugus
ENSAPLG00000006808	TRUB1	99	75.273	ENSNGAG00000018682	Trub1	79	75.273	Nannospalax_galili
ENSAPLG00000006808	TRUB1	96	65.672	ENSNBRG00000023393	trub1	94	65.672	Neolamprologus_brichardi
ENSAPLG00000006808	TRUB1	99	76.000	ENSNLEG00000016345	TRUB1	79	76.000	Nomascus_leucogenys
ENSAPLG00000006808	TRUB1	72	81.592	ENSMEUG00000006603	TRUB1	79	80.189	Notamacropus_eugenii
ENSAPLG00000006808	TRUB1	97	73.162	ENSOPRG00000009371	TRUB1	79	73.162	Ochotona_princeps
ENSAPLG00000006808	TRUB1	97	71.324	ENSODEG00000010854	TRUB1	78	71.324	Octodon_degus
ENSAPLG00000006808	TRUB1	87	69.672	ENSONIG00000007249	trub1	89	69.672	Oreochromis_niloticus
ENSAPLG00000006808	TRUB1	98	78.388	ENSOANG00000001556	TRUB1	92	77.338	Ornithorhynchus_anatinus
ENSAPLG00000006808	TRUB1	99	73.455	ENSOCUG00000009456	TRUB1	79	73.455	Oryctolagus_cuniculus
ENSAPLG00000006808	TRUB1	86	68.880	ENSORLG00000029719	trub1	86	68.880	Oryzias_latipes
ENSAPLG00000006808	TRUB1	86	68.465	ENSORLG00020016767	trub1	85	68.465	Oryzias_latipes_hni
ENSAPLG00000006808	TRUB1	86	68.465	ENSORLG00015014728	trub1	86	68.465	Oryzias_latipes_hsok
ENSAPLG00000006808	TRUB1	87	67.769	ENSOMEG00000014556	trub1	85	67.769	Oryzias_melastigma
ENSAPLG00000006808	TRUB1	99	76.364	ENSOGAG00000015895	TRUB1	79	76.364	Otolemur_garnettii
ENSAPLG00000006808	TRUB1	97	73.477	ENSOARG00000015591	TRUB1	79	73.477	Ovis_aries
ENSAPLG00000006808	TRUB1	99	76.000	ENSPPAG00000043645	TRUB1	79	76.000	Pan_paniscus
ENSAPLG00000006808	TRUB1	99	76.000	ENSPPRG00000007096	TRUB1	79	76.000	Panthera_pardus
ENSAPLG00000006808	TRUB1	99	76.364	ENSPTIG00000006378	TRUB1	79	76.364	Panthera_tigris_altaica
ENSAPLG00000006808	TRUB1	99	76.000	ENSPTRG00000002964	TRUB1	79	76.000	Pan_troglodytes
ENSAPLG00000006808	TRUB1	99	75.636	ENSPANG00000020712	TRUB1	79	75.636	Papio_anubis
ENSAPLG00000006808	TRUB1	60	67.665	ENSPKIG00000003852	trub1	72	67.665	Paramormyrops_kingsleyae
ENSAPLG00000006808	TRUB1	99	82.609	ENSPSIG00000012877	TRUB1	95	82.609	Pelodiscus_sinensis
ENSAPLG00000006808	TRUB1	91	64.822	ENSPMGG00000000075	trub1	91	64.822	Periophthalmus_magnuspinnatus
ENSAPLG00000006808	TRUB1	99	75.273	ENSPEMG00000011156	Trub1	80	75.735	Peromyscus_maniculatus_bairdii
ENSAPLG00000006808	TRUB1	97	78.889	ENSPCIG00000009729	TRUB1	76	77.778	Phascolarctos_cinereus
ENSAPLG00000006808	TRUB1	87	67.623	ENSPFOG00000009950	trub1	89	67.623	Poecilia_formosa
ENSAPLG00000006808	TRUB1	87	67.623	ENSPLAG00000013855	trub1	86	67.623	Poecilia_latipinna
ENSAPLG00000006808	TRUB1	87	67.623	ENSPMEG00000009064	trub1	88	67.623	Poecilia_mexicana
ENSAPLG00000006808	TRUB1	91	66.279	ENSPREG00000003343	trub1	93	66.279	Poecilia_reticulata
ENSAPLG00000006808	TRUB1	99	75.636	ENSPPYG00000002676	TRUB1	79	75.636	Pongo_abelii
ENSAPLG00000006808	TRUB1	100	65.591	ENSPCAG00000008427	TRUB1	79	65.591	Procavia_capensis
ENSAPLG00000006808	TRUB1	99	71.636	ENSPCOG00000024360	TRUB1	78	71.636	Propithecus_coquereli
ENSAPLG00000006808	TRUB1	75	77.990	ENSPVAG00000007575	TRUB1	79	77.990	Pteropus_vampyrus
ENSAPLG00000006808	TRUB1	93	67.433	ENSPNYG00000018614	trub1	94	67.433	Pundamilia_nyererei
ENSAPLG00000006808	TRUB1	87	59.671	ENSPNAG00000006881	trub1	78	59.671	Pygocentrus_nattereri
ENSAPLG00000006808	TRUB1	98	71.533	ENSRNOG00000017321	Trub1	80	71.533	Rattus_norvegicus
ENSAPLG00000006808	TRUB1	99	66.545	ENSRBIG00000033423	TRUB1	77	66.545	Rhinopithecus_bieti
ENSAPLG00000006808	TRUB1	99	75.636	ENSRROG00000033902	TRUB1	79	75.636	Rhinopithecus_roxellana
ENSAPLG00000006808	TRUB1	99	75.636	ENSSBOG00000024237	TRUB1	78	75.636	Saimiri_boliviensis_boliviensis
ENSAPLG00000006808	TRUB1	85	78.333	ENSSHAG00000009346	TRUB1	80	78.333	Sarcophilus_harrisii
ENSAPLG00000006808	TRUB1	94	68.441	ENSSFOG00015022124	trub1	88	68.441	Scleropages_formosus
ENSAPLG00000006808	TRUB1	87	69.262	ENSSMAG00000001020	trub1	87	69.262	Scophthalmus_maximus
ENSAPLG00000006808	TRUB1	86	69.038	ENSSDUG00000016414	trub1	88	69.262	Seriola_dumerili
ENSAPLG00000006808	TRUB1	86	69.456	ENSSLDG00000015486	trub1	88	69.672	Seriola_lalandi_dorsalis
ENSAPLG00000006808	TRUB1	100	81.004	ENSSPUG00000001642	TRUB1	96	81.004	Sphenodon_punctatus
ENSAPLG00000006808	TRUB1	87	69.672	ENSSPAG00000001217	trub1	88	69.672	Stegastes_partitus
ENSAPLG00000006808	TRUB1	97	75.368	ENSSSCG00000010653	TRUB1	79	75.185	Sus_scrofa
ENSAPLG00000006808	TRUB1	97	89.259	ENSTGUG00000010971	TRUB1	99	88.129	Taeniopygia_guttata
ENSAPLG00000006808	TRUB1	82	62.882	ENSTBEG00000002880	TRUB1	90	62.882	Tupaia_belangeri
ENSAPLG00000006808	TRUB1	73	78.818	ENSTTRG00000005767	TRUB1	77	78.818	Tursiops_truncatus
ENSAPLG00000006808	TRUB1	99	76.364	ENSUAMG00000024876	TRUB1	79	76.364	Ursus_americanus
ENSAPLG00000006808	TRUB1	99	76.000	ENSUMAG00000002411	TRUB1	82	76.000	Ursus_maritimus
ENSAPLG00000006808	TRUB1	97	77.941	ENSVPAG00000005507	TRUB1	78	77.941	Vicugna_pacos
ENSAPLG00000006808	TRUB1	99	76.364	ENSVVUG00000010085	TRUB1	66	76.838	Vulpes_vulpes
ENSAPLG00000006808	TRUB1	99	65.580	ENSXETG00000023828	trub1	100	65.580	Xenopus_tropicalis
ENSAPLG00000006808	TRUB1	87	66.942	ENSXCOG00000017847	trub1	86	66.942	Xiphophorus_couchianus
ENSAPLG00000006808	TRUB1	87	67.213	ENSXMAG00000014701	trub1	88	67.213	Xiphophorus_maculatus