EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000006862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 4331 bases
Position: chrKB742987.1:16809-21139
Accession: 101802998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006497	PPR	PF01535.20	3.7e-18	1	2
ENSAPLP00000006497	PPR	PF01535.20	3.7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000007143	-	1899	XM_005018292	ENSAPLP00000006497	633 (aa)	XP_005018349	U3IGX5

Gene Model

Click here to download ENSAPLG00000006862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000006862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000006862	-	93	60.606	ENSG00000248919	ATP5MF-PTCD1	79	60.606	Homo_sapiens
ENSAPLG00000006862	-	93	60.606	ENSG00000106246	PTCD1	84	60.606	Homo_sapiens
ENSAPLG00000006862	-	89	46.329	ENSAPOG00000010679	ptcd1	85	47.038	Acanthochromis_polyacanthus
ENSAPLG00000006862	-	96	60.323	ENSAMEG00000006224	-	81	60.749	Ailuropoda_melanoleuca
ENSAPLG00000006862	-	91	50.169	ENSACIG00000017861	ptcd1	84	50.169	Amphilophus_citrinellus
ENSAPLG00000006862	-	98	46.708	ENSAOCG00000020741	-	82	47.154	Amphiprion_ocellaris
ENSAPLG00000006862	-	89	47.260	ENSAOCG00000022617	ptcd1	81	47.772	Amphiprion_ocellaris
ENSAPLG00000006862	-	93	47.619	ENSAPEG00000022632	ptcd1	80	48.123	Amphiprion_percula
ENSAPLG00000006862	-	93	50.423	ENSATEG00000007016	ptcd1	80	50.862	Anabas_testudineus
ENSAPLG00000006862	-	96	63.533	ENSACAG00000012871	-	81	63.547	Anolis_carolinensis
ENSAPLG00000006862	-	93	60.165	ENSANAG00000035790	-	87	60.165	Aotus_nancymaae
ENSAPLG00000006862	-	91	49.576	ENSACLG00000002824	ptcd1	80	49.576	Astatotilapia_calliptera
ENSAPLG00000006862	-	94	51.669	ENSAMXG00000037292	ptcd1	87	52.244	Astyanax_mexicanus
ENSAPLG00000006862	-	93	60.265	ENSBTAG00000020440	-	74	60.768	Bos_taurus
ENSAPLG00000006862	-	93	60.531	ENSCJAG00000015815	-	85	60.531	Callithrix_jacchus
ENSAPLG00000006862	-	96	59.194	ENSCAFG00000015055	-	81	59.543	Canis_familiaris
ENSAPLG00000006862	-	96	59.194	ENSCAFG00020014480	-	81	59.543	Canis_lupus_dingo
ENSAPLG00000006862	-	93	60.399	ENSCHIG00000027000	-	84	60.774	Capra_hircus
ENSAPLG00000006862	-	95	60.000	ENSTSYG00000029495	-	87	60.000	Carlito_syrichta
ENSAPLG00000006862	-	94	58.509	ENSCAPG00000014660	-	93	58.509	Cavia_aperea
ENSAPLG00000006862	-	94	59.643	ENSCPOG00000001780	-	87	59.643	Cavia_porcellus
ENSAPLG00000006862	-	95	59.477	ENSCCAG00000034025	-	87	59.477	Cebus_capucinus
ENSAPLG00000006862	-	95	58.320	ENSCATG00000040859	-	87	58.481	Cercocebus_atys
ENSAPLG00000006862	-	94	59.868	ENSCLAG00000006354	-	86	59.706	Chinchilla_lanigera
ENSAPLG00000006862	-	86	58.865	ENSCSAG00000017794	-	82	59.043	Chlorocebus_sabaeus
ENSAPLG00000006862	-	97	68.896	ENSCPBG00000020866	-	85	69.889	Chrysemys_picta_bellii
ENSAPLG00000006862	-	90	31.842	ENSCING00000007717	-	97	32.014	Ciona_intestinalis
ENSAPLG00000006862	-	95	58.454	ENSCANG00000023441	-	87	58.671	Colobus_angolensis_palliatus
ENSAPLG00000006862	-	95	59.446	ENSCGRG00001023686	Ptcd1	84	60.134	Cricetulus_griseus_chok1gshd
ENSAPLG00000006862	-	95	59.446	ENSCGRG00000015031	Ptcd1	84	60.134	Cricetulus_griseus_crigri
ENSAPLG00000006862	-	91	48.247	ENSCSEG00000002378	ptcd1	80	49.069	Cynoglossus_semilaevis
ENSAPLG00000006862	-	93	49.320	ENSCVAG00000003621	ptcd1	88	49.073	Cyprinodon_variegatus
ENSAPLG00000006862	-	90	50.874	ENSCVAG00000015826	ptcd1	80	50.874	Cyprinodon_variegatus
ENSAPLG00000006862	-	96	51.608	ENSDARG00000076176	ptcd1	87	52.117	Danio_rerio
ENSAPLG00000006862	-	95	60.000	ENSDNOG00000009957	-	84	60.804	Dasypus_novemcinctus
ENSAPLG00000006862	-	93	59.473	ENSDORG00000000740	Ptcd1	88	59.032	Dipodomys_ordii
ENSAPLG00000006862	-	94	36.842	ENSEBUG00000014515	ptcd1	98	35.275	Eptatretus_burgeri
ENSAPLG00000006862	-	93	61.398	ENSEASG00005002480	-	84	61.960	Equus_asinus_asinus
ENSAPLG00000006862	-	93	61.231	ENSECAG00000016617	-	84	61.564	Equus_caballus
ENSAPLG00000006862	-	93	46.571	ENSELUG00000016517	ptcd1	82	46.774	Esox_lucius
ENSAPLG00000006862	-	94	61.194	ENSFCAG00000015069	-	84	61.667	Felis_catus
ENSAPLG00000006862	-	96	79.553	ENSFALG00000013803	-	87	79.712	Ficedula_albicollis
ENSAPLG00000006862	-	93	60.504	ENSFDAG00000006393	-	84	60.134	Fukomys_damarensis
ENSAPLG00000006862	-	86	47.645	ENSFHEG00000012491	ptcd1	93	47.645	Fundulus_heteroclitus
ENSAPLG00000006862	-	90	47.766	ENSGMOG00000007639	ptcd1	91	47.766	Gadus_morhua
ENSAPLG00000006862	-	99	81.832	ENSGALG00000004711	-	92	81.832	Gallus_gallus
ENSAPLG00000006862	-	91	48.635	ENSGAFG00000013175	ptcd1	82	48.635	Gambusia_affinis
ENSAPLG00000006862	-	91	50.085	ENSGACG00000016607	ptcd1	88	50.085	Gasterosteus_aculeatus
ENSAPLG00000006862	-	90	68.870	ENSGAGG00000021832	-	85	69.588	Gopherus_agassizii
ENSAPLG00000006862	-	93	60.202	ENSGGOG00000015123	-	84	60.202	Gorilla_gorilla
ENSAPLG00000006862	-	91	49.915	ENSHBUG00000018275	ptcd1	80	49.915	Haplochromis_burtoni
ENSAPLG00000006862	-	95	60.263	ENSHGLG00000017621	-	86	60.263	Heterocephalus_glaber_female
ENSAPLG00000006862	-	95	60.263	ENSHGLG00100007218	-	86	60.263	Heterocephalus_glaber_male
ENSAPLG00000006862	-	96	44.984	ENSHCOG00000010784	ptcd1	86	45.469	Hippocampus_comes
ENSAPLG00000006862	-	97	57.656	ENSSTOG00000001682	-	86	58.682	Ictidomys_tridecemlineatus
ENSAPLG00000006862	-	92	60.774	ENSJJAG00000000319	Ptcd1	86	59.967	Jaculus_jaculus
ENSAPLG00000006862	-	93	47.927	ENSKMAG00000008708	ptcd1	80	49.225	Kryptolebias_marmoratus
ENSAPLG00000006862	-	98	47.426	ENSLBEG00000008061	ptcd1	85	48.490	Labrus_bergylta
ENSAPLG00000006862	-	95	61.148	ENSLACG00000011172	ptcd1	84	61.194	Latimeria_chalumnae
ENSAPLG00000006862	-	96	56.563	ENSLOCG00000004833	ptcd1	94	56.291	Lepisosteus_oculatus
ENSAPLG00000006862	-	93	59.900	ENSLAFG00000002588	-	84	60.403	Loxodonta_africana
ENSAPLG00000006862	-	95	58.158	ENSMFAG00000041324	-	87	58.320	Macaca_fascicularis
ENSAPLG00000006862	-	95	57.997	ENSMMUG00000030408	-	87	58.158	Macaca_mulatta
ENSAPLG00000006862	-	95	58.320	ENSMNEG00000043786	-	87	58.481	Macaca_nemestrina
ENSAPLG00000006862	-	95	44.084	ENSMLEG00000031179	-	85	46.353	Mandrillus_leucophaeus
ENSAPLG00000006862	-	99	48.154	ENSMAMG00000007623	ptcd1	84	48.885	Mastacembelus_armatus
ENSAPLG00000006862	-	91	49.831	ENSMZEG00005012722	ptcd1	80	49.745	Maylandia_zebra
ENSAPLG00000006862	-	95	83.740	ENSMGAG00000004211	-	81	83.740	Meleagris_gallopavo
ENSAPLG00000006862	-	97	56.869	ENSMICG00000017428	-	87	57.325	Microcebus_murinus
ENSAPLG00000006862	-	90	48.969	ENSMMOG00000020243	ptcd1	87	48.969	Mola_mola
ENSAPLG00000006862	-	99	58.065	ENSMODG00000001350	-	85	59.271	Monodelphis_domestica
ENSAPLG00000006862	-	92	50.168	ENSMALG00000018442	ptcd1	79	50.594	Monopterus_albus
ENSAPLG00000006862	-	97	57.929	MGP_CAROLIEiJ_G0028011	Ptcd1	87	58.592	Mus_caroli
ENSAPLG00000006862	-	97	58.320	ENSMUSG00000029624	Ptcd1	87	58.824	Mus_musculus
ENSAPLG00000006862	-	95	59.150	MGP_PahariEiJ_G0024580	Ptcd1	87	59.314	Mus_pahari
ENSAPLG00000006862	-	97	58.320	MGP_SPRETEiJ_G0029012	Ptcd1	87	58.824	Mus_spretus
ENSAPLG00000006862	-	96	60.870	ENSMPUG00000016518	-	87	61.301	Mustela_putorius_furo
ENSAPLG00000006862	-	93	60.465	ENSMLUG00000010994	-	79	60.465	Myotis_lucifugus
ENSAPLG00000006862	-	92	49.500	ENSNBRG00000010079	ptcd1	84	49.416	Neolamprologus_brichardi
ENSAPLG00000006862	-	85	60.989	ENSNLEG00000011060	-	92	60.989	Nomascus_leucogenys
ENSAPLG00000006862	-	96	60.386	ENSMEUG00000006930	-	86	61.462	Notamacropus_eugenii
ENSAPLG00000006862	-	85	59.322	ENSOPRG00000013647	-	77	64.865	Ochotona_princeps
ENSAPLG00000006862	-	90	48.644	ENSONIG00000003168	ptcd1	94	48.644	Oreochromis_niloticus
ENSAPLG00000006862	-	87	56.842	ENSOANG00000007728	-	76	55.369	Ornithorhynchus_anatinus
ENSAPLG00000006862	-	92	59.136	ENSOCUG00000010584	-	82	59.136	Oryctolagus_cuniculus
ENSAPLG00000006862	-	90	50.258	ENSORLG00000009275	ptcd1	82	50.258	Oryzias_latipes
ENSAPLG00000006862	-	90	50.086	ENSORLG00020000988	ptcd1	82	50.086	Oryzias_latipes_hni
ENSAPLG00000006862	-	90	49.570	ENSORLG00015010557	ptcd1	82	49.570	Oryzias_latipes_hsok
ENSAPLG00000006862	-	90	50.087	ENSOMEG00000020627	ptcd1	84	50.262	Oryzias_melastigma
ENSAPLG00000006862	-	93	59.197	ENSOGAG00000010877	-	87	58.469	Otolemur_garnettii
ENSAPLG00000006862	-	93	56.645	ENSOARG00000018676	-	84	56.975	Ovis_aries
ENSAPLG00000006862	-	93	60.642	ENSPPAG00000036024	-	84	60.642	Pan_paniscus
ENSAPLG00000006862	-	94	61.194	ENSPPRG00000003478	-	85	61.642	Panthera_pardus
ENSAPLG00000006862	-	93	60.811	ENSPTRG00000019452	-	84	60.811	Pan_troglodytes
ENSAPLG00000006862	-	95	58.320	ENSPANG00000016730	-	87	58.481	Papio_anubis
ENSAPLG00000006862	-	97	54.750	ENSPKIG00000014215	ptcd1	89	55.139	Paramormyrops_kingsleyae
ENSAPLG00000006862	-	93	67.780	ENSPSIG00000011184	-	99	67.947	Pelodiscus_sinensis
ENSAPLG00000006862	-	81	42.912	ENSPMAG00000009667	ptcd1	100	42.912	Petromyzon_marinus
ENSAPLG00000006862	-	96	58.464	ENSPCIG00000024778	-	85	58.730	Phascolarctos_cinereus
ENSAPLG00000006862	-	86	48.624	ENSPFOG00000004458	ptcd1	82	47.350	Poecilia_formosa
ENSAPLG00000006862	-	86	48.807	ENSPLAG00000011051	ptcd1	82	47.521	Poecilia_latipinna
ENSAPLG00000006862	-	91	47.179	ENSPMEG00000020547	ptcd1	82	47.179	Poecilia_mexicana
ENSAPLG00000006862	-	90	47.751	ENSPREG00000000059	ptcd1	82	47.513	Poecilia_reticulata
ENSAPLG00000006862	-	95	59.574	ENSPPYG00000017377	-	90	60.540	Pongo_abelii
ENSAPLG00000006862	-	84	60.000	ENSPCAG00000001852	-	83	61.947	Procavia_capensis
ENSAPLG00000006862	-	95	58.833	ENSPCOG00000018596	-	87	59.157	Propithecus_coquereli
ENSAPLG00000006862	-	60	70.000	ENSPVAG00000007529	-	59	70.000	Pteropus_vampyrus
ENSAPLG00000006862	-	91	49.406	ENSPNYG00000019993	ptcd1	80	49.406	Pundamilia_nyererei
ENSAPLG00000006862	-	94	52.941	ENSPNAG00000014931	ptcd1	90	51.800	Pygocentrus_nattereri
ENSAPLG00000006862	-	92	60.504	ENSRNOG00000000987	Ptcd1	86	60.504	Rattus_norvegicus
ENSAPLG00000006862	-	98	58.085	ENSRBIG00000043393	-	87	58.966	Rhinopithecus_bieti
ENSAPLG00000006862	-	98	57.928	ENSRROG00000036420	-	87	58.805	Rhinopithecus_roxellana
ENSAPLG00000006862	-	93	60.461	ENSSBOG00000024114	-	85	60.461	Saimiri_boliviensis_boliviensis
ENSAPLG00000006862	-	95	60.912	ENSSHAG00000011376	-	92	61.386	Sarcophilus_harrisii
ENSAPLG00000006862	-	93	56.137	ENSSFOG00015007909	ptcd1	82	56.137	Scleropages_formosus
ENSAPLG00000006862	-	96	47.011	ENSSMAG00000000218	ptcd1	95	47.334	Scophthalmus_maximus
ENSAPLG00000006862	-	91	50.426	ENSSDUG00000015671	ptcd1	83	50.426	Seriola_dumerili
ENSAPLG00000006862	-	91	50.596	ENSSLDG00000014261	ptcd1	83	49.744	Seriola_lalandi_dorsalis
ENSAPLG00000006862	-	97	63.963	ENSSPUG00000003540	-	85	64.865	Sphenodon_punctatus
ENSAPLG00000006862	-	94	47.512	ENSSPAG00000011049	ptcd1	80	48.911	Stegastes_partitus
ENSAPLG00000006862	-	93	60.768	ENSSSCG00000007622	-	89	60.768	Sus_scrofa
ENSAPLG00000006862	-	96	82.131	ENSTGUG00000007563	-	99	82.450	Taeniopygia_guttata
ENSAPLG00000006862	-	90	49.313	ENSTRUG00000013471	ptcd1	84	47.665	Takifugu_rubripes
ENSAPLG00000006862	-	93	49.259	ENSTNIG00000008271	ptcd1	82	49.915	Tetraodon_nigroviridis
ENSAPLG00000006862	-	96	59.242	ENSTBEG00000011021	-	88	59.649	Tupaia_belangeri
ENSAPLG00000006862	-	93	58.785	ENSTTRG00000003006	-	85	58.970	Tursiops_truncatus
ENSAPLG00000006862	-	96	59.839	ENSUAMG00000008049	-	87	60.261	Ursus_americanus
ENSAPLG00000006862	-	95	59.609	ENSVVUG00000008836	-	85	60.840	Vulpes_vulpes
ENSAPLG00000006862	-	94	56.066	ENSXETG00000009891	ptcd1	86	56.811	Xenopus_tropicalis
ENSAPLG00000006862	-	91	47.952	ENSXMAG00000015540	ptcd1	84	47.333	Xiphophorus_maculatus