EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000007174 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 14441 bases
Position: chrKB744634.1:249555-263995
Accession: 101793052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006857	CPSF_A	PF03178.15	3.3e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000007508	DDB1-201	3408	XM_005028971	ENSAPLP00000006857	1135 (aa)	XP_005029028	U3IHY5

Gene Model

Click here to download ENSAPLG00000007174's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03420	Nucleotide excision repair	KEGG
apla04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000007174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000007174	DDB1	99	96.444	ENSG00000167986	DDB1	99	96.933	Homo_sapiens
ENSAPLG00000007174	DDB1	97	89.764	ENSAPOG00000005036	ddb1	99	90.176	Acanthochromis_polyacanthus
ENSAPLG00000007174	DDB1	99	96.533	ENSAMEG00000016518	DDB1	98	96.533	Ailuropoda_melanoleuca
ENSAPLG00000007174	DDB1	85	90.279	ENSACIG00000020624	ddb1	99	90.279	Amphilophus_citrinellus
ENSAPLG00000007174	DDB1	99	89.646	ENSAOCG00000003066	ddb1	99	89.646	Amphiprion_ocellaris
ENSAPLG00000007174	DDB1	99	89.735	ENSAPEG00000000092	ddb1	99	89.735	Amphiprion_percula
ENSAPLG00000007174	DDB1	93	90.463	ENSATEG00000020571	ddb1	96	90.463	Anabas_testudineus
ENSAPLG00000007174	DDB1	99	96.444	ENSACAG00000017758	DDB1	98	96.444	Anolis_carolinensis
ENSAPLG00000007174	DDB1	99	96.444	ENSANAG00000021878	DDB1	98	96.444	Aotus_nancymaae
ENSAPLG00000007174	DDB1	99	89.912	ENSACLG00000012401	ddb1	99	89.912	Astatotilapia_calliptera
ENSAPLG00000007174	DDB1	99	96.533	ENSBTAG00000021569	DDB1	92	96.533	Bos_taurus
ENSAPLG00000007174	DDB1	99	36.883	WBGene00010890	ddb-1	99	36.883	Caenorhabditis_elegans
ENSAPLG00000007174	DDB1	99	96.444	ENSCJAG00000019319	DDB1	98	96.444	Callithrix_jacchus
ENSAPLG00000007174	DDB1	99	96.533	ENSCAFG00000016264	DDB1	98	96.601	Canis_familiaris
ENSAPLG00000007174	DDB1	93	96.601	ENSCAFG00020012722	DDB1	98	96.601	Canis_lupus_dingo
ENSAPLG00000007174	DDB1	99	96.533	ENSCHIG00000014969	DDB1	98	96.533	Capra_hircus
ENSAPLG00000007174	DDB1	99	96.089	ENSTSYG00000008027	DDB1	98	96.089	Carlito_syrichta
ENSAPLG00000007174	DDB1	99	96.078	ENSCAPG00000010786	DDB1	100	96.078	Cavia_aperea
ENSAPLG00000007174	DDB1	99	95.911	ENSCPOG00000009956	DDB1	98	95.911	Cavia_porcellus
ENSAPLG00000007174	DDB1	99	96.444	ENSCCAG00000035883	DDB1	98	96.444	Cebus_capucinus
ENSAPLG00000007174	DDB1	99	94.019	ENSCATG00000044495	DDB1	98	94.019	Cercocebus_atys
ENSAPLG00000007174	DDB1	99	96.000	ENSCLAG00000004126	DDB1	98	96.000	Chinchilla_lanigera
ENSAPLG00000007174	DDB1	99	96.444	ENSCSAG00000006392	DDB1	98	96.444	Chlorocebus_sabaeus
ENSAPLG00000007174	DDB1	86	90.395	ENSCHOG00000011377	DDB1	88	90.395	Choloepus_hoffmanni
ENSAPLG00000007174	DDB1	99	97.333	ENSCPBG00000017728	DDB1	98	97.333	Chrysemys_picta_bellii
ENSAPLG00000007174	DDB1	99	61.424	ENSCING00000007437	-	98	61.424	Ciona_intestinalis
ENSAPLG00000007174	DDB1	95	60.331	ENSCSAVG00000004783	-	100	60.331	Ciona_savignyi
ENSAPLG00000007174	DDB1	99	96.444	ENSCANG00000019948	DDB1	98	96.444	Colobus_angolensis_palliatus
ENSAPLG00000007174	DDB1	99	96.533	ENSCGRG00001016599	Ddb1	98	96.533	Cricetulus_griseus_chok1gshd
ENSAPLG00000007174	DDB1	99	96.533	ENSCGRG00000013427	Ddb1	98	96.533	Cricetulus_griseus_crigri
ENSAPLG00000007174	DDB1	92	89.695	ENSCSEG00000012499	ddb1	99	88.103	Cynoglossus_semilaevis
ENSAPLG00000007174	DDB1	93	90.179	ENSCVAG00000019531	ddb1	98	90.179	Cyprinodon_variegatus
ENSAPLG00000007174	DDB1	99	87.091	ENSDARG00000074431	ddb1	99	87.213	Danio_rerio
ENSAPLG00000007174	DDB1	93	96.056	ENSDNOG00000014884	DDB1	96	96.056	Dasypus_novemcinctus
ENSAPLG00000007174	DDB1	89	89.214	ENSDORG00000000127	Ddb1	98	96.065	Dipodomys_ordii
ENSAPLG00000007174	DDB1	99	60.619	FBgn0260962	pic	98	60.619	Drosophila_melanogaster
ENSAPLG00000007174	DDB1	70	94.915	ENSETEG00000001053	-	69	94.915	Echinops_telfairi
ENSAPLG00000007174	DDB1	77	83.676	ENSEBUG00000014593	ddb1	96	83.676	Eptatretus_burgeri
ENSAPLG00000007174	DDB1	99	96.356	ENSEASG00005008184	DDB1	98	96.356	Equus_asinus_asinus
ENSAPLG00000007174	DDB1	99	96.444	ENSECAG00000012136	DDB1	98	96.444	Equus_caballus
ENSAPLG00000007174	DDB1	79	94.949	ENSEEUG00000003194	DDB1	79	94.949	Erinaceus_europaeus
ENSAPLG00000007174	DDB1	99	89.558	ENSELUG00000023868	ddb1	99	89.558	Esox_lucius
ENSAPLG00000007174	DDB1	99	96.533	ENSFCAG00000029716	DDB1	98	96.533	Felis_catus
ENSAPLG00000007174	DDB1	99	99.110	ENSFALG00000011981	DDB1	98	99.110	Ficedula_albicollis
ENSAPLG00000007174	DDB1	99	96.089	ENSFDAG00000005128	DDB1	98	96.089	Fukomys_damarensis
ENSAPLG00000007174	DDB1	90	90.698	ENSFHEG00000022133	ddb1	98	90.698	Fundulus_heteroclitus
ENSAPLG00000007174	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSAPLG00000007174	DDB1	99	98.489	ENSGALG00000042333	DDB1	98	98.489	Gallus_gallus
ENSAPLG00000007174	DDB1	93	89.896	ENSGAFG00000013142	ddb1	98	89.896	Gambusia_affinis
ENSAPLG00000007174	DDB1	95	88.622	ENSGACG00000017182	ddb1	99	88.622	Gasterosteus_aculeatus
ENSAPLG00000007174	DDB1	96	98.065	ENSGAGG00000014124	DDB1	99	98.065	Gopherus_agassizii
ENSAPLG00000007174	DDB1	99	96.444	ENSGGOG00000004052	DDB1	98	96.444	Gorilla_gorilla
ENSAPLG00000007174	DDB1	99	89.912	ENSHBUG00000008873	ddb1	99	90.599	Haplochromis_burtoni
ENSAPLG00000007174	DDB1	99	96.089	ENSHGLG00000018430	DDB1	98	96.089	Heterocephalus_glaber_female
ENSAPLG00000007174	DDB1	99	95.022	ENSHGLG00100014475	DDB1	98	95.022	Heterocephalus_glaber_male
ENSAPLG00000007174	DDB1	94	89.306	ENSHCOG00000018670	ddb1	98	89.306	Hippocampus_comes
ENSAPLG00000007174	DDB1	99	89.204	ENSIPUG00000005612	DDB1	99	89.204	Ictalurus_punctatus
ENSAPLG00000007174	DDB1	99	96.444	ENSSTOG00000007552	DDB1	98	96.444	Ictidomys_tridecemlineatus
ENSAPLG00000007174	DDB1	99	96.444	ENSJJAG00000017769	Ddb1	98	96.444	Jaculus_jaculus
ENSAPLG00000007174	DDB1	93	89.991	ENSKMAG00000002315	ddb1	99	89.991	Kryptolebias_marmoratus
ENSAPLG00000007174	DDB1	84	90.739	ENSLBEG00000017065	ddb1	99	90.739	Labrus_bergylta
ENSAPLG00000007174	DDB1	99	93.015	ENSLACG00000017611	DDB1	99	93.015	Latimeria_chalumnae
ENSAPLG00000007174	DDB1	91	82.486	ENSLOCG00000000012	ddb1	99	82.486	Lepisosteus_oculatus
ENSAPLG00000007174	DDB1	99	96.267	ENSLAFG00000011513	DDB1	98	96.267	Loxodonta_africana
ENSAPLG00000007174	DDB1	99	96.444	ENSMFAG00000042035	DDB1	98	96.444	Macaca_fascicularis
ENSAPLG00000007174	DDB1	98	96.505	ENSMMUG00000002691	DDB1	98	96.505	Macaca_mulatta
ENSAPLG00000007174	DDB1	99	96.444	ENSMNEG00000031559	DDB1	98	96.444	Macaca_nemestrina
ENSAPLG00000007174	DDB1	99	96.444	ENSMLEG00000044136	DDB1	98	96.444	Mandrillus_leucophaeus
ENSAPLG00000007174	DDB1	99	90.088	ENSMAMG00000014372	ddb1	99	90.088	Mastacembelus_armatus
ENSAPLG00000007174	DDB1	99	89.823	ENSMZEG00005013835	ddb1	99	89.823	Maylandia_zebra
ENSAPLG00000007174	DDB1	95	99.069	ENSMGAG00000004990	DDB1	100	99.069	Meleagris_gallopavo
ENSAPLG00000007174	DDB1	99	96.533	ENSMAUG00000012926	Ddb1	98	96.533	Mesocricetus_auratus
ENSAPLG00000007174	DDB1	99	96.444	ENSMICG00000013703	DDB1	98	96.444	Microcebus_murinus
ENSAPLG00000007174	DDB1	99	96.444	ENSMOCG00000020499	Ddb1	98	96.444	Microtus_ochrogaster
ENSAPLG00000007174	DDB1	85	90.072	ENSMMOG00000001758	ddb1	99	90.072	Mola_mola
ENSAPLG00000007174	DDB1	99	87.522	ENSMODG00000020353	DDB1	98	87.522	Monodelphis_domestica
ENSAPLG00000007174	DDB1	99	90.000	ENSMALG00000014071	ddb1	99	90.000	Monopterus_albus
ENSAPLG00000007174	DDB1	99	96.533	MGP_CAROLIEiJ_G0022695	Ddb1	98	96.533	Mus_caroli
ENSAPLG00000007174	DDB1	99	96.444	ENSMUSG00000024740	Ddb1	98	96.444	Mus_musculus
ENSAPLG00000007174	DDB1	99	96.533	MGP_PahariEiJ_G0014189	Ddb1	98	96.533	Mus_pahari
ENSAPLG00000007174	DDB1	99	96.533	MGP_SPRETEiJ_G0023609	Ddb1	98	96.533	Mus_spretus
ENSAPLG00000007174	DDB1	99	93.333	ENSMPUG00000014200	DDB1	98	93.333	Mustela_putorius_furo
ENSAPLG00000007174	DDB1	99	96.444	ENSMLUG00000013232	DDB1	98	96.444	Myotis_lucifugus
ENSAPLG00000007174	DDB1	99	96.444	ENSNGAG00000009384	Ddb1	98	96.444	Nannospalax_galili
ENSAPLG00000007174	DDB1	99	90.000	ENSNBRG00000019581	ddb1	99	90.000	Neolamprologus_brichardi
ENSAPLG00000007174	DDB1	99	93.404	ENSNLEG00000002022	DDB1	98	93.404	Nomascus_leucogenys
ENSAPLG00000007174	DDB1	90	96.516	ENSMEUG00000001099	DDB1	93	96.516	Notamacropus_eugenii
ENSAPLG00000007174	DDB1	91	89.072	ENSOPRG00000008254	DDB1	90	89.072	Ochotona_princeps
ENSAPLG00000007174	DDB1	99	95.822	ENSODEG00000002419	DDB1	98	95.822	Octodon_degus
ENSAPLG00000007174	DDB1	99	89.912	ENSONIG00000005804	ddb1	99	89.912	Oreochromis_niloticus
ENSAPLG00000007174	DDB1	91	97.198	ENSOANG00000004897	DDB1	100	97.198	Ornithorhynchus_anatinus
ENSAPLG00000007174	DDB1	99	96.622	ENSOCUG00000001667	DDB1	98	96.622	Oryctolagus_cuniculus
ENSAPLG00000007174	DDB1	93	90.085	ENSORLG00000001399	ddb1	97	89.981	Oryzias_latipes
ENSAPLG00000007174	DDB1	93	89.991	ENSORLG00020001277	ddb1	94	89.991	Oryzias_latipes_hni
ENSAPLG00000007174	DDB1	94	89.106	ENSORLG00015002080	ddb1	99	89.106	Oryzias_latipes_hsok
ENSAPLG00000007174	DDB1	93	90.557	ENSOMEG00000006181	ddb1	96	90.557	Oryzias_melastigma
ENSAPLG00000007174	DDB1	99	96.444	ENSOGAG00000016103	DDB1	98	96.444	Otolemur_garnettii
ENSAPLG00000007174	DDB1	97	96.661	ENSOARG00000011716	DDB1	96	96.661	Ovis_aries
ENSAPLG00000007174	DDB1	99	96.444	ENSPPAG00000035343	DDB1	98	96.444	Pan_paniscus
ENSAPLG00000007174	DDB1	99	96.533	ENSPPRG00000013300	DDB1	98	96.533	Panthera_pardus
ENSAPLG00000007174	DDB1	99	96.702	ENSPTIG00000006909	DDB1	98	96.702	Panthera_tigris_altaica
ENSAPLG00000007174	DDB1	99	96.444	ENSPTRG00000003737	DDB1	98	96.444	Pan_troglodytes
ENSAPLG00000007174	DDB1	99	96.444	ENSPANG00000000242	DDB1	98	96.444	Papio_anubis
ENSAPLG00000007174	DDB1	93	90.274	ENSPKIG00000019213	ddb1	93	90.274	Paramormyrops_kingsleyae
ENSAPLG00000007174	DDB1	99	96.983	ENSPSIG00000013275	DDB1	100	96.983	Pelodiscus_sinensis
ENSAPLG00000007174	DDB1	85	89.969	ENSPMGG00000021179	ddb1	99	89.969	Periophthalmus_magnuspinnatus
ENSAPLG00000007174	DDB1	99	96.533	ENSPEMG00000012241	Ddb1	98	96.533	Peromyscus_maniculatus_bairdii
ENSAPLG00000007174	DDB1	89	86.149	ENSPMAG00000008479	ddb1	100	86.149	Petromyzon_marinus
ENSAPLG00000007174	DDB1	99	96.800	ENSPCIG00000002643	DDB1	98	96.800	Phascolarctos_cinereus
ENSAPLG00000007174	DDB1	99	89.646	ENSPFOG00000002768	ddb1	99	89.646	Poecilia_formosa
ENSAPLG00000007174	DDB1	99	89.381	ENSPLAG00000017227	ddb1	99	89.381	Poecilia_latipinna
ENSAPLG00000007174	DDB1	99	89.381	ENSPMEG00000011398	ddb1	99	89.381	Poecilia_mexicana
ENSAPLG00000007174	DDB1	93	90.085	ENSPREG00000004440	ddb1	96	90.085	Poecilia_reticulata
ENSAPLG00000007174	DDB1	99	91.858	ENSPPYG00000003193	DDB1	98	91.858	Pongo_abelii
ENSAPLG00000007174	DDB1	83	96.434	ENSPCAG00000011040	DDB1	83	96.434	Procavia_capensis
ENSAPLG00000007174	DDB1	99	95.209	ENSPCOG00000015176	DDB1	98	95.209	Propithecus_coquereli
ENSAPLG00000007174	DDB1	99	96.356	ENSPVAG00000003847	DDB1	98	96.356	Pteropus_vampyrus
ENSAPLG00000007174	DDB1	93	90.274	ENSPNAG00000006635	ddb1	96	90.274	Pygocentrus_nattereri
ENSAPLG00000007174	DDB1	99	96.444	ENSRNOG00000020715	Ddb1	98	96.444	Rattus_norvegicus
ENSAPLG00000007174	DDB1	99	96.444	ENSRBIG00000033611	DDB1	98	96.505	Rhinopithecus_bieti
ENSAPLG00000007174	DDB1	99	96.444	ENSRROG00000041407	DDB1	98	96.444	Rhinopithecus_roxellana
ENSAPLG00000007174	DDB1	99	96.533	ENSSBOG00000019775	DDB1	98	96.533	Saimiri_boliviensis_boliviensis
ENSAPLG00000007174	DDB1	95	95.527	ENSSHAG00000011600	DDB1	100	95.527	Sarcophilus_harrisii
ENSAPLG00000007174	DDB1	94	89.084	ENSSFOG00015011151	ddb1	97	89.084	Scleropages_formosus
ENSAPLG00000007174	DDB1	99	89.469	ENSSMAG00000009495	ddb1	99	89.469	Scophthalmus_maximus
ENSAPLG00000007174	DDB1	99	89.912	ENSSDUG00000004642	ddb1	99	89.912	Seriola_dumerili
ENSAPLG00000007174	DDB1	99	89.912	ENSSLDG00000015804	ddb1	99	89.912	Seriola_lalandi_dorsalis
ENSAPLG00000007174	DDB1	64	100.000	ENSSARG00000003290	-	66	100.000	Sorex_araneus
ENSAPLG00000007174	DDB1	99	97.422	ENSSPUG00000019338	DDB1	98	97.422	Sphenodon_punctatus
ENSAPLG00000007174	DDB1	93	90.368	ENSSPAG00000009888	ddb1	98	90.368	Stegastes_partitus
ENSAPLG00000007174	DDB1	99	95.733	ENSSSCG00000013094	DDB1	98	95.733	Sus_scrofa
ENSAPLG00000007174	DDB1	99	98.311	ENSTGUG00000006414	DDB1	98	98.311	Taeniopygia_guttata
ENSAPLG00000007174	DDB1	93	88.952	ENSTRUG00000016682	ddb1	97	88.952	Takifugu_rubripes
ENSAPLG00000007174	DDB1	88	84.876	ENSTNIG00000009565	ddb1	99	84.876	Tetraodon_nigroviridis
ENSAPLG00000007174	DDB1	93	91.938	ENSTTRG00000011055	DDB1	94	91.938	Tursiops_truncatus
ENSAPLG00000007174	DDB1	93	96.601	ENSUAMG00000017793	DDB1	92	96.601	Ursus_americanus
ENSAPLG00000007174	DDB1	93	96.601	ENSUMAG00000011788	DDB1	96	96.601	Ursus_maritimus
ENSAPLG00000007174	DDB1	90	93.333	ENSVPAG00000007963	DDB1	92	93.333	Vicugna_pacos
ENSAPLG00000007174	DDB1	99	96.533	ENSVVUG00000004987	DDB1	98	96.533	Vulpes_vulpes
ENSAPLG00000007174	DDB1	99	91.358	ENSXETG00000008820	ddb1	99	91.358	Xenopus_tropicalis
ENSAPLG00000007174	DDB1	85	89.762	ENSXCOG00000013956	ddb1	99	89.762	Xiphophorus_couchianus
ENSAPLG00000007174	DDB1	93	89.896	ENSXMAG00000000022	ddb1	98	89.896	Xiphophorus_maculatus