EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000007217 (Gene tree)
Gene ID: -
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 40506 bases
Position: chrKB743317.1:2327427-2367932
Accession: 101797481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006915	Suf	PF05843.14	2.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000007566	CSTF3-201	2725	XM_005022039	ENSAPLP00000006915	708 (aa)	XP_021129847	R0LDE2

Gene Model

Click here to download ENSAPLG00000007217's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000007217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000007217	CSTF3	100	98.023	ENSG00000176102	CSTF3	99	98.023	Homo_sapiens
ENSAPLG00000007217	CSTF3	100	91.949	ENSAPOG00000014054	cstf3	99	91.949	Acanthochromis_polyacanthus
ENSAPLG00000007217	CSTF3	100	98.164	ENSAMEG00000007187	CSTF3	98	98.164	Ailuropoda_melanoleuca
ENSAPLG00000007217	CSTF3	88	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSAPLG00000007217	CSTF3	100	91.808	ENSAOCG00000010930	cstf3	99	91.808	Amphiprion_ocellaris
ENSAPLG00000007217	CSTF3	100	91.808	ENSAPEG00000007903	cstf3	99	91.808	Amphiprion_percula
ENSAPLG00000007217	CSTF3	100	92.090	ENSATEG00000000190	cstf3	99	92.090	Anabas_testudineus
ENSAPLG00000007217	CSTF3	100	97.316	ENSACAG00000002823	CSTF3	99	97.316	Anolis_carolinensis
ENSAPLG00000007217	CSTF3	100	98.023	ENSANAG00000020699	CSTF3	100	97.760	Aotus_nancymaae
ENSAPLG00000007217	CSTF3	99	91.773	ENSACLG00000007820	cstf3	99	91.808	Astatotilapia_calliptera
ENSAPLG00000007217	CSTF3	100	90.973	ENSAMXG00000014198	cstf3	99	91.255	Astyanax_mexicanus
ENSAPLG00000007217	CSTF3	100	98.023	ENSBTAG00000008617	CSTF3	100	97.923	Bos_taurus
ENSAPLG00000007217	CSTF3	99	49.315	WBGene00006307	suf-1	99	49.315	Caenorhabditis_elegans
ENSAPLG00000007217	CSTF3	100	98.023	ENSCJAG00000005533	CSTF3	100	97.760	Callithrix_jacchus
ENSAPLG00000007217	CSTF3	100	98.023	ENSCAFG00000007264	CSTF3	99	98.023	Canis_familiaris
ENSAPLG00000007217	CSTF3	100	98.023	ENSCAFG00020002715	CSTF3	98	98.023	Canis_lupus_dingo
ENSAPLG00000007217	CSTF3	99	96.444	ENSCHIG00000016418	CSTF3	100	97.760	Capra_hircus
ENSAPLG00000007217	CSTF3	100	97.740	ENSTSYG00000000451	CSTF3	99	99.777	Carlito_syrichta
ENSAPLG00000007217	CSTF3	84	91.706	ENSCAPG00000010958	CSTF3	98	91.706	Cavia_aperea
ENSAPLG00000007217	CSTF3	100	97.881	ENSCPOG00000005545	CSTF3	99	97.881	Cavia_porcellus
ENSAPLG00000007217	CSTF3	100	98.023	ENSCCAG00000024790	CSTF3	100	97.760	Cebus_capucinus
ENSAPLG00000007217	CSTF3	100	98.023	ENSCATG00000007080	CSTF3	100	97.760	Cercocebus_atys
ENSAPLG00000007217	CSTF3	100	98.023	ENSCLAG00000016179	CSTF3	99	98.023	Chinchilla_lanigera
ENSAPLG00000007217	CSTF3	79	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSAPLG00000007217	CSTF3	100	99.011	ENSCPBG00000006753	CSTF3	99	99.011	Chrysemys_picta_bellii
ENSAPLG00000007217	CSTF3	99	62.238	ENSCING00000006401	-	98	62.238	Ciona_intestinalis
ENSAPLG00000007217	CSTF3	99	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSAPLG00000007217	CSTF3	100	98.023	ENSCANG00000035468	CSTF3	100	97.760	Colobus_angolensis_palliatus
ENSAPLG00000007217	CSTF3	100	97.881	ENSCGRG00001014773	Cstf3	99	97.881	Cricetulus_griseus_chok1gshd
ENSAPLG00000007217	CSTF3	100	97.881	ENSCGRG00000004142	Cstf3	99	97.881	Cricetulus_griseus_crigri
ENSAPLG00000007217	CSTF3	100	91.525	ENSCSEG00000014283	cstf3	99	91.525	Cynoglossus_semilaevis
ENSAPLG00000007217	CSTF3	100	90.819	ENSCVAG00000019739	cstf3	99	90.819	Cyprinodon_variegatus
ENSAPLG00000007217	CSTF3	100	92.232	ENSDARG00000018904	cstf3	99	92.232	Danio_rerio
ENSAPLG00000007217	CSTF3	100	97.881	ENSDNOG00000007366	CSTF3	99	97.881	Dasypus_novemcinctus
ENSAPLG00000007217	CSTF3	100	90.127	ENSDORG00000005898	Cstf3	99	90.127	Dipodomys_ordii
ENSAPLG00000007217	CSTF3	99	57.438	FBgn0003559	su(f)	98	57.438	Drosophila_melanogaster
ENSAPLG00000007217	CSTF3	91	92.679	ENSETEG00000017097	CSTF3	90	92.679	Echinops_telfairi
ENSAPLG00000007217	CSTF3	85	73.884	ENSEBUG00000015459	cstf3	96	73.884	Eptatretus_burgeri
ENSAPLG00000007217	CSTF3	99	98.143	ENSEASG00005019884	CSTF3	100	98.143	Equus_asinus_asinus
ENSAPLG00000007217	CSTF3	99	98.143	ENSECAG00000023338	CSTF3	100	98.143	Equus_caballus
ENSAPLG00000007217	CSTF3	100	92.514	ENSEEUG00000015167	CSTF3	99	92.514	Erinaceus_europaeus
ENSAPLG00000007217	CSTF3	100	90.395	ENSELUG00000023393	cstf3	99	90.395	Esox_lucius
ENSAPLG00000007217	CSTF3	100	98.023	ENSFCAG00000030711	CSTF3	99	98.023	Felis_catus
ENSAPLG00000007217	CSTF3	94	99.248	ENSFALG00000010764	CSTF3	100	98.003	Ficedula_albicollis
ENSAPLG00000007217	CSTF3	100	98.023	ENSFDAG00000012082	CSTF3	99	98.023	Fukomys_damarensis
ENSAPLG00000007217	CSTF3	100	90.960	ENSFHEG00000020623	cstf3	99	90.960	Fundulus_heteroclitus
ENSAPLG00000007217	CSTF3	100	90.127	ENSGMOG00000012275	cstf3	99	90.127	Gadus_morhua
ENSAPLG00000007217	CSTF3	100	99.294	ENSGALG00000011685	CSTF3	99	99.294	Gallus_gallus
ENSAPLG00000007217	CSTF3	100	91.243	ENSGAFG00000002181	cstf3	99	91.243	Gambusia_affinis
ENSAPLG00000007217	CSTF3	100	91.243	ENSGACG00000015997	cstf3	99	91.243	Gasterosteus_aculeatus
ENSAPLG00000007217	CSTF3	100	98.870	ENSGAGG00000006200	CSTF3	99	98.870	Gopherus_agassizii
ENSAPLG00000007217	CSTF3	100	92.090	ENSGGOG00000026591	CSTF3	99	92.090	Gorilla_gorilla
ENSAPLG00000007217	CSTF3	99	91.773	ENSHBUG00000016656	cstf3	99	91.808	Haplochromis_burtoni
ENSAPLG00000007217	CSTF3	100	97.740	ENSHGLG00000017834	CSTF3	99	97.740	Heterocephalus_glaber_female
ENSAPLG00000007217	CSTF3	100	97.740	ENSHGLG00100018042	CSTF3	99	97.740	Heterocephalus_glaber_male
ENSAPLG00000007217	CSTF3	99	89.235	ENSHCOG00000015218	cstf3	99	89.266	Hippocampus_comes
ENSAPLG00000007217	CSTF3	100	90.819	ENSIPUG00000013170	CSTF3	99	90.819	Ictalurus_punctatus
ENSAPLG00000007217	CSTF3	100	98.023	ENSSTOG00000013306	CSTF3	99	98.023	Ictidomys_tridecemlineatus
ENSAPLG00000007217	CSTF3	100	86.158	ENSJJAG00000018430	Cstf3	98	86.158	Jaculus_jaculus
ENSAPLG00000007217	CSTF3	100	90.395	ENSKMAG00000010916	cstf3	99	90.395	Kryptolebias_marmoratus
ENSAPLG00000007217	CSTF3	100	90.819	ENSLBEG00000002306	cstf3	99	90.819	Labrus_bergylta
ENSAPLG00000007217	CSTF3	100	94.209	ENSLACG00000017296	CSTF3	99	94.209	Latimeria_chalumnae
ENSAPLG00000007217	CSTF3	100	93.644	ENSLOCG00000004415	cstf3	99	93.644	Lepisosteus_oculatus
ENSAPLG00000007217	CSTF3	100	98.305	ENSLAFG00000008712	CSTF3	99	98.305	Loxodonta_africana
ENSAPLG00000007217	CSTF3	100	98.023	ENSMFAG00000029516	CSTF3	100	97.760	Macaca_fascicularis
ENSAPLG00000007217	CSTF3	100	98.023	ENSMMUG00000002542	CSTF3	99	98.023	Macaca_mulatta
ENSAPLG00000007217	CSTF3	100	98.023	ENSMNEG00000021807	CSTF3	100	97.760	Macaca_nemestrina
ENSAPLG00000007217	CSTF3	100	98.023	ENSMLEG00000039594	CSTF3	100	97.760	Mandrillus_leucophaeus
ENSAPLG00000007217	CSTF3	100	91.667	ENSMAMG00000020423	cstf3	99	91.667	Mastacembelus_armatus
ENSAPLG00000007217	CSTF3	99	91.773	ENSMZEG00005012082	cstf3	99	91.808	Maylandia_zebra
ENSAPLG00000007217	CSTF3	100	99.294	ENSMGAG00000001383	CSTF3	99	99.294	Meleagris_gallopavo
ENSAPLG00000007217	CSTF3	100	97.740	ENSMAUG00000002487	Cstf3	99	97.740	Mesocricetus_auratus
ENSAPLG00000007217	CSTF3	100	98.023	ENSMICG00000004784	CSTF3	100	97.760	Microcebus_murinus
ENSAPLG00000007217	CSTF3	100	97.881	ENSMOCG00000017583	Cstf3	99	97.881	Microtus_ochrogaster
ENSAPLG00000007217	CSTF3	100	91.525	ENSMMOG00000016026	cstf3	94	91.525	Mola_mola
ENSAPLG00000007217	CSTF3	99	84.300	ENSMODG00000025205	-	99	84.300	Monodelphis_domestica
ENSAPLG00000007217	CSTF3	100	97.740	ENSMODG00000009745	-	99	97.740	Monodelphis_domestica
ENSAPLG00000007217	CSTF3	100	91.525	ENSMALG00000012050	cstf3	99	91.525	Monopterus_albus
ENSAPLG00000007217	CSTF3	100	97.881	MGP_CAROLIEiJ_G0024026	Cstf3	99	97.881	Mus_caroli
ENSAPLG00000007217	CSTF3	100	97.881	ENSMUSG00000027176	Cstf3	99	97.881	Mus_musculus
ENSAPLG00000007217	CSTF3	100	97.881	MGP_PahariEiJ_G0025464	Cstf3	99	97.881	Mus_pahari
ENSAPLG00000007217	CSTF3	100	97.881	MGP_SPRETEiJ_G0024939	Cstf3	99	97.881	Mus_spretus
ENSAPLG00000007217	CSTF3	100	98.164	ENSMPUG00000011457	CSTF3	99	98.164	Mustela_putorius_furo
ENSAPLG00000007217	CSTF3	100	95.198	ENSMLUG00000026022	-	99	95.198	Myotis_lucifugus
ENSAPLG00000007217	CSTF3	100	98.023	ENSMLUG00000003073	-	99	98.023	Myotis_lucifugus
ENSAPLG00000007217	CSTF3	100	97.881	ENSNGAG00000010677	Cstf3	99	97.881	Nannospalax_galili
ENSAPLG00000007217	CSTF3	88	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSAPLG00000007217	CSTF3	100	98.023	ENSNLEG00000017901	CSTF3	100	97.760	Nomascus_leucogenys
ENSAPLG00000007217	CSTF3	74	94.837	ENSMEUG00000005640	-	100	94.837	Notamacropus_eugenii
ENSAPLG00000007217	CSTF3	67	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSAPLG00000007217	CSTF3	90	85.377	ENSODEG00000006311	-	97	85.377	Octodon_degus
ENSAPLG00000007217	CSTF3	100	98.023	ENSODEG00000016737	-	99	98.023	Octodon_degus
ENSAPLG00000007217	CSTF3	99	91.773	ENSONIG00000005563	cstf3	99	91.808	Oreochromis_niloticus
ENSAPLG00000007217	CSTF3	92	97.538	ENSOANG00000015140	CSTF3	100	97.538	Ornithorhynchus_anatinus
ENSAPLG00000007217	CSTF3	100	98.023	ENSOCUG00000015417	CSTF3	99	98.023	Oryctolagus_cuniculus
ENSAPLG00000007217	CSTF3	99	91.231	ENSORLG00000009762	cstf3	99	91.231	Oryzias_latipes
ENSAPLG00000007217	CSTF3	99	91.231	ENSORLG00020005540	cstf3	99	91.231	Oryzias_latipes_hni
ENSAPLG00000007217	CSTF3	99	91.089	ENSORLG00015003551	cstf3	99	91.089	Oryzias_latipes_hsok
ENSAPLG00000007217	CSTF3	99	90.806	ENSOMEG00000003848	cstf3	99	90.806	Oryzias_melastigma
ENSAPLG00000007217	CSTF3	100	97.750	ENSOGAG00000010229	CSTF3	99	97.750	Otolemur_garnettii
ENSAPLG00000007217	CSTF3	91	97.667	ENSOARG00000017271	CSTF3	99	97.667	Ovis_aries
ENSAPLG00000007217	CSTF3	100	94.492	ENSPPAG00000027358	CSTF3	99	94.492	Pan_paniscus
ENSAPLG00000007217	CSTF3	100	98.023	ENSPPRG00000016852	CSTF3	99	98.023	Panthera_pardus
ENSAPLG00000007217	CSTF3	100	98.023	ENSPTIG00000008716	CSTF3	99	98.023	Panthera_tigris_altaica
ENSAPLG00000007217	CSTF3	100	98.023	ENSPTRG00000003485	CSTF3	99	98.023	Pan_troglodytes
ENSAPLG00000007217	CSTF3	100	98.023	ENSPANG00000013722	CSTF3	99	98.023	Papio_anubis
ENSAPLG00000007217	CSTF3	100	92.373	ENSPKIG00000023648	cstf3	99	92.373	Paramormyrops_kingsleyae
ENSAPLG00000007217	CSTF3	100	98.305	ENSPSIG00000009173	CSTF3	99	98.305	Pelodiscus_sinensis
ENSAPLG00000007217	CSTF3	76	95.725	ENSPMGG00000000164	cstf3	98	95.725	Periophthalmus_magnuspinnatus
ENSAPLG00000007217	CSTF3	100	97.881	ENSPEMG00000011481	Cstf3	99	97.881	Peromyscus_maniculatus_bairdii
ENSAPLG00000007217	CSTF3	100	79.747	ENSPMAG00000007282	cstf3	99	79.747	Petromyzon_marinus
ENSAPLG00000007217	CSTF3	100	80.959	ENSPCIG00000030419	-	89	81.382	Phascolarctos_cinereus
ENSAPLG00000007217	CSTF3	100	94.781	ENSPCIG00000026406	-	100	96.800	Phascolarctos_cinereus
ENSAPLG00000007217	CSTF3	100	91.384	ENSPFOG00000017239	cstf3	99	91.384	Poecilia_formosa
ENSAPLG00000007217	CSTF3	100	91.384	ENSPLAG00000009456	cstf3	99	91.384	Poecilia_latipinna
ENSAPLG00000007217	CSTF3	100	91.384	ENSPMEG00000010320	cstf3	99	91.384	Poecilia_mexicana
ENSAPLG00000007217	CSTF3	100	91.384	ENSPREG00000013549	cstf3	99	91.384	Poecilia_reticulata
ENSAPLG00000007217	CSTF3	100	98.023	ENSPPYG00000003375	CSTF3	99	98.023	Pongo_abelii
ENSAPLG00000007217	CSTF3	70	99.652	ENSPCAG00000008025	-	70	99.652	Procavia_capensis
ENSAPLG00000007217	CSTF3	100	92.797	ENSPCOG00000014417	CSTF3	99	92.797	Propithecus_coquereli
ENSAPLG00000007217	CSTF3	100	92.514	ENSPVAG00000002350	CSTF3	99	92.514	Pteropus_vampyrus
ENSAPLG00000007217	CSTF3	99	91.773	ENSPNYG00000018259	cstf3	99	91.808	Pundamilia_nyererei
ENSAPLG00000007217	CSTF3	100	92.373	ENSPNAG00000020182	cstf3	99	92.373	Pygocentrus_nattereri
ENSAPLG00000007217	CSTF3	88	97.280	ENSRNOG00000012089	Cstf3	100	97.280	Rattus_norvegicus
ENSAPLG00000007217	CSTF3	100	96.610	ENSRBIG00000044258	CSTF3	100	97.760	Rhinopithecus_bieti
ENSAPLG00000007217	CSTF3	100	98.023	ENSRROG00000043450	CSTF3	100	97.760	Rhinopithecus_roxellana
ENSAPLG00000007217	CSTF3	100	98.023	ENSSBOG00000024764	CSTF3	98	99.777	Saimiri_boliviensis_boliviensis
ENSAPLG00000007217	CSTF3	99	85.856	ENSSHAG00000003135	-	98	85.856	Sarcophilus_harrisii
ENSAPLG00000007217	CSTF3	100	97.458	ENSSHAG00000018128	-	99	97.458	Sarcophilus_harrisii
ENSAPLG00000007217	CSTF3	100	93.220	ENSSFOG00015022133	cstf3	99	93.220	Scleropages_formosus
ENSAPLG00000007217	CSTF3	100	91.102	ENSSMAG00000002197	cstf3	99	91.102	Scophthalmus_maximus
ENSAPLG00000007217	CSTF3	100	91.949	ENSSDUG00000020426	cstf3	99	91.949	Seriola_dumerili
ENSAPLG00000007217	CSTF3	100	91.949	ENSSLDG00000025649	cstf3	99	91.949	Seriola_lalandi_dorsalis
ENSAPLG00000007217	CSTF3	100	97.881	ENSSARG00000000391	CSTF3	99	97.881	Sorex_araneus
ENSAPLG00000007217	CSTF3	98	98.263	ENSSPUG00000010546	CSTF3	100	98.263	Sphenodon_punctatus
ENSAPLG00000007217	CSTF3	100	91.808	ENSSPAG00000004958	cstf3	99	91.808	Stegastes_partitus
ENSAPLG00000007217	CSTF3	100	97.881	ENSSSCG00000040954	CSTF3	99	97.881	Sus_scrofa
ENSAPLG00000007217	CSTF3	100	98.729	ENSTGUG00000005010	CSTF3	100	98.729	Taeniopygia_guttata
ENSAPLG00000007217	CSTF3	100	90.395	ENSTRUG00000004959	cstf3	99	90.395	Takifugu_rubripes
ENSAPLG00000007217	CSTF3	100	90.819	ENSTNIG00000013811	cstf3	98	90.819	Tetraodon_nigroviridis
ENSAPLG00000007217	CSTF3	91	94.548	ENSTBEG00000001544	CSTF3	90	94.548	Tupaia_belangeri
ENSAPLG00000007217	CSTF3	100	95.198	ENSTTRG00000016366	CSTF3	99	95.198	Tursiops_truncatus
ENSAPLG00000007217	CSTF3	100	98.023	ENSUMAG00000018971	CSTF3	100	97.760	Ursus_maritimus
ENSAPLG00000007217	CSTF3	100	97.881	ENSVPAG00000007800	CSTF3	99	97.881	Vicugna_pacos
ENSAPLG00000007217	CSTF3	100	98.023	ENSVVUG00000014938	CSTF3	100	97.760	Vulpes_vulpes
ENSAPLG00000007217	CSTF3	89	79.844	ENSXETG00000021399	cstf3	100	81.068	Xenopus_tropicalis
ENSAPLG00000007217	CSTF3	67	43.776	ENSXETG00000017946	-	99	43.776	Xenopus_tropicalis
ENSAPLG00000007217	CSTF3	88	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSAPLG00000007217	CSTF3	100	91.384	ENSXMAG00000009545	cstf3	99	91.384	Xiphophorus_maculatus