EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000007255 (Gene tree)
Gene ID: -
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 6286 bases
Position: chrKB742866.1:152852-159137
Accession: 101799783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000006934	RRM_1	PF00076.22	2.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000007585	CSTF2-201	1782	XM_005016725	ENSAPLP00000006934	593 (aa)	-	U3II62

Gene Model

Click here to download ENSAPLG00000007255's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000007255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000007255	CSTF2	98	78.487	ENSG00000101811	CSTF2	84	94.180	Homo_sapiens
ENSAPLG00000007255	CSTF2	81	85.776	ENSAPOG00000005630	cstf2	94	58.784	Acanthochromis_polyacanthus
ENSAPLG00000007255	CSTF2	98	77.741	ENSAMEG00000002082	CSTF2	97	78.020	Ailuropoda_melanoleuca
ENSAPLG00000007255	CSTF2	84	81.933	ENSACIG00000012852	cstf2	93	56.537	Amphilophus_citrinellus
ENSAPLG00000007255	CSTF2	83	81.481	ENSAOCG00000020905	cstf2	94	58.953	Amphiprion_ocellaris
ENSAPLG00000007255	CSTF2	82	82.353	ENSAPEG00000006526	cstf2	94	58.983	Amphiprion_percula
ENSAPLG00000007255	CSTF2	81	84.848	ENSATEG00000018186	cstf2	94	58.944	Anabas_testudineus
ENSAPLG00000007255	CSTF2	98	77.647	ENSANAG00000022342	CSTF2	97	78.098	Aotus_nancymaae
ENSAPLG00000007255	CSTF2	82	83.190	ENSACLG00000000779	cstf2	90	58.824	Astatotilapia_calliptera
ENSAPLG00000007255	CSTF2	71	89.286	ENSAMXG00000021477	cstf2	92	98.000	Astyanax_mexicanus
ENSAPLG00000007255	CSTF2	98	77.797	ENSBTAG00000003547	CSTF2	97	78.082	Bos_taurus
ENSAPLG00000007255	CSTF2	98	78.136	ENSCJAG00000004422	CSTF2	96	84.588	Callithrix_jacchus
ENSAPLG00000007255	CSTF2	98	75.798	ENSCAFG00000017551	CSTF2	97	76.061	Canis_familiaris
ENSAPLG00000007255	CSTF2	98	78.655	ENSCAFG00020007619	CSTF2	97	78.947	Canis_lupus_dingo
ENSAPLG00000007255	CSTF2	98	77.797	ENSCHIG00000016994	CSTF2	97	78.082	Capra_hircus
ENSAPLG00000007255	CSTF2	98	78.814	ENSTSYG00000006529	CSTF2	97	79.281	Carlito_syrichta
ENSAPLG00000007255	CSTF2	98	77.815	ENSCPOG00000015255	CSTF2	89	90.798	Cavia_porcellus
ENSAPLG00000007255	CSTF2	98	78.136	ENSCCAG00000032975	CSTF2	97	78.596	Cebus_capucinus
ENSAPLG00000007255	CSTF2	98	78.151	ENSCATG00000022835	CSTF2	97	78.608	Cercocebus_atys
ENSAPLG00000007255	CSTF2	98	77.983	ENSCLAG00000001904	CSTF2	87	91.875	Chinchilla_lanigera
ENSAPLG00000007255	CSTF2	98	78.151	ENSCSAG00000010360	CSTF2	97	78.608	Chlorocebus_sabaeus
ENSAPLG00000007255	CSTF2	51	96.226	ENSCHOG00000012803	CSTF2	63	96.226	Choloepus_hoffmanni
ENSAPLG00000007255	CSTF2	98	84.335	ENSCPBG00000014293	CSTF2	97	84.603	Chrysemys_picta_bellii
ENSAPLG00000007255	CSTF2	98	78.151	ENSCANG00000030612	CSTF2	97	78.608	Colobus_angolensis_palliatus
ENSAPLG00000007255	CSTF2	98	73.411	ENSCGRG00001023023	Cstf2	97	73.649	Cricetulus_griseus_chok1gshd
ENSAPLG00000007255	CSTF2	98	73.356	ENSCGRG00000003897	Cstf2	97	73.459	Cricetulus_griseus_crigri
ENSAPLG00000007255	CSTF2	82	84.388	ENSCVAG00000005731	cstf2	94	59.455	Cyprinodon_variegatus
ENSAPLG00000007255	CSTF2	71	88.462	ENSDARG00000090788	cstf2	91	97.826	Danio_rerio
ENSAPLG00000007255	CSTF2	98	74.324	ENSDORG00000007195	Cstf2	89	91.975	Dipodomys_ordii
ENSAPLG00000007255	CSTF2	71	89.189	ENSETEG00000004931	CSTF2	64	92.537	Echinops_telfairi
ENSAPLG00000007255	CSTF2	98	78.824	ENSEASG00005001216	CSTF2	97	79.117	Equus_asinus_asinus
ENSAPLG00000007255	CSTF2	98	78.824	ENSECAG00000009325	CSTF2	97	79.117	Equus_caballus
ENSAPLG00000007255	CSTF2	98	78.655	ENSFCAG00000007000	CSTF2	97	78.947	Felis_catus
ENSAPLG00000007255	CSTF2	93	94.004	ENSFALG00000003859	CSTF2	100	94.004	Ficedula_albicollis
ENSAPLG00000007255	CSTF2	98	75.462	ENSFDAG00000002416	CSTF2	97	75.891	Fukomys_damarensis
ENSAPLG00000007255	CSTF2	82	83.544	ENSFHEG00000017065	cstf2	91	59.022	Fundulus_heteroclitus
ENSAPLG00000007255	CSTF2	82	76.724	ENSGMOG00000005145	cstf2	97	55.499	Gadus_morhua
ENSAPLG00000007255	CSTF2	98	92.334	ENSGALG00000006760	CSTF2	96	98.227	Gallus_gallus
ENSAPLG00000007255	CSTF2	83	80.328	ENSGAFG00000020027	cstf2	94	57.167	Gambusia_affinis
ENSAPLG00000007255	CSTF2	98	54.941	ENSGACG00000017326	cstf2	91	83.673	Gasterosteus_aculeatus
ENSAPLG00000007255	CSTF2	98	86.526	ENSGAGG00000006037	CSTF2	97	86.808	Gopherus_agassizii
ENSAPLG00000007255	CSTF2	98	78.487	ENSGGOG00000022267	CSTF2	97	78.947	Gorilla_gorilla
ENSAPLG00000007255	CSTF2	82	84.914	ENSHBUG00000016183	cstf2	90	59.628	Haplochromis_burtoni
ENSAPLG00000007255	CSTF2	98	75.294	ENSHGLG00000000659	-	88	90.303	Heterocephalus_glaber_female
ENSAPLG00000007255	CSTF2	98	66.212	ENSHGLG00000013455	-	97	66.552	Heterocephalus_glaber_female
ENSAPLG00000007255	CSTF2	98	66.212	ENSHGLG00100015391	-	97	66.552	Heterocephalus_glaber_male
ENSAPLG00000007255	CSTF2	98	75.294	ENSHGLG00100001130	-	88	90.303	Heterocephalus_glaber_male
ENSAPLG00000007255	CSTF2	98	56.784	ENSHCOG00000005157	cstf2	94	58.027	Hippocampus_comes
ENSAPLG00000007255	CSTF2	91	67.907	ENSIPUG00000017839	cstf2	95	61.775	Ictalurus_punctatus
ENSAPLG00000007255	CSTF2	98	75.462	ENSSTOG00000023445	CSTF2	87	91.824	Ictidomys_tridecemlineatus
ENSAPLG00000007255	CSTF2	98	74.958	ENSJJAG00000020507	Cstf2	87	91.824	Jaculus_jaculus
ENSAPLG00000007255	CSTF2	82	84.914	ENSKMAG00000001068	cstf2	93	58.163	Kryptolebias_marmoratus
ENSAPLG00000007255	CSTF2	50	85.455	ENSLBEG00000028720	cstf2	75	93.478	Labrus_bergylta
ENSAPLG00000007255	CSTF2	98	67.323	ENSLACG00000015927	CSTF2	97	67.053	Latimeria_chalumnae
ENSAPLG00000007255	CSTF2	98	63.697	ENSLOCG00000015300	cstf2	90	63.176	Lepisosteus_oculatus
ENSAPLG00000007255	CSTF2	98	78.788	ENSLAFG00000000474	CSTF2	97	79.592	Loxodonta_africana
ENSAPLG00000007255	CSTF2	98	78.151	ENSMFAG00000043888	CSTF2	97	78.608	Macaca_fascicularis
ENSAPLG00000007255	CSTF2	98	78.511	ENSMMUG00000013008	CSTF2	97	78.974	Macaca_mulatta
ENSAPLG00000007255	CSTF2	98	78.305	ENSMNEG00000041824	CSTF2	97	78.767	Macaca_nemestrina
ENSAPLG00000007255	CSTF2	98	78.151	ENSMLEG00000036870	CSTF2	97	78.608	Mandrillus_leucophaeus
ENSAPLG00000007255	CSTF2	82	84.681	ENSMAMG00000020364	cstf2	95	59.083	Mastacembelus_armatus
ENSAPLG00000007255	CSTF2	83	81.513	ENSMZEG00005007200	cstf2	94	58.824	Maylandia_zebra
ENSAPLG00000007255	CSTF2	80	90.756	ENSMGAG00000004139	CSTF2	100	97.638	Meleagris_gallopavo
ENSAPLG00000007255	CSTF2	98	73.782	ENSMAUG00000000965	Cstf2	97	74.662	Mesocricetus_auratus
ENSAPLG00000007255	CSTF2	98	80.000	ENSMICG00000014121	CSTF2	97	80.308	Microcebus_murinus
ENSAPLG00000007255	CSTF2	98	74.368	ENSMOCG00000008081	Cstf2	97	75.809	Microtus_ochrogaster
ENSAPLG00000007255	CSTF2	82	91.282	ENSMMOG00000000538	cstf2	88	93.548	Mola_mola
ENSAPLG00000007255	CSTF2	98	77.909	ENSMODG00000011785	CSTF2	97	78.876	Monodelphis_domestica
ENSAPLG00000007255	CSTF2	98	73.411	MGP_CAROLIEiJ_G0033383	Cstf2	87	91.875	Mus_caroli
ENSAPLG00000007255	CSTF2	98	73.411	ENSMUSG00000031256	Cstf2	87	91.875	Mus_musculus
ENSAPLG00000007255	CSTF2	98	73.534	MGP_PahariEiJ_G0031923	Cstf2	97	74.619	Mus_pahari
ENSAPLG00000007255	CSTF2	98	73.244	MGP_SPRETEiJ_G0034548	Cstf2	87	91.875	Mus_spretus
ENSAPLG00000007255	CSTF2	98	74.363	ENSMPUG00000002339	CSTF2	97	74.598	Mustela_putorius_furo
ENSAPLG00000007255	CSTF2	98	74.482	ENSMLUG00000004598	CSTF2	95	74.557	Myotis_lucifugus
ENSAPLG00000007255	CSTF2	98	74.707	ENSNGAG00000021985	Cstf2	97	75.804	Nannospalax_galili
ENSAPLG00000007255	CSTF2	96	53.516	ENSNBRG00000021694	cstf2	100	55.043	Neolamprologus_brichardi
ENSAPLG00000007255	CSTF2	98	78.319	ENSNLEG00000007510	CSTF2	97	78.778	Nomascus_leucogenys
ENSAPLG00000007255	CSTF2	98	73.810	ENSMEUG00000007875	-	97	74.742	Notamacropus_eugenii
ENSAPLG00000007255	CSTF2	92	74.410	ENSMEUG00000014025	-	100	75.686	Notamacropus_eugenii
ENSAPLG00000007255	CSTF2	98	76.401	ENSMEUG00000011186	-	97	77.702	Notamacropus_eugenii
ENSAPLG00000007255	CSTF2	75	90.698	ENSOPRG00000003106	CSTF2	77	93.210	Ochotona_princeps
ENSAPLG00000007255	CSTF2	98	74.454	ENSODEG00000002059	CSTF2	97	75.042	Octodon_degus
ENSAPLG00000007255	CSTF2	97	56.447	ENSONIG00000002631	cstf2	97	54.394	Oreochromis_niloticus
ENSAPLG00000007255	CSTF2	98	75.126	ENSOCUG00000010468	CSTF2	97	75.382	Oryctolagus_cuniculus
ENSAPLG00000007255	CSTF2	82	82.353	ENSORLG00000001380	cstf2	93	58.179	Oryzias_latipes
ENSAPLG00000007255	CSTF2	82	82.353	ENSORLG00020021917	cstf2	93	58.179	Oryzias_latipes_hni
ENSAPLG00000007255	CSTF2	82	82.353	ENSORLG00015011996	cstf2	93	58.179	Oryzias_latipes_hsok
ENSAPLG00000007255	CSTF2	83	82.305	ENSOMEG00000015507	cstf2	93	60.068	Oryzias_melastigma
ENSAPLG00000007255	CSTF2	98	74.641	ENSOGAG00000011192	CSTF2	97	75.040	Otolemur_garnettii
ENSAPLG00000007255	CSTF2	97	78.157	ENSOARG00000001022	CSTF2	97	77.816	Ovis_aries
ENSAPLG00000007255	CSTF2	98	78.487	ENSPPAG00000031804	CSTF2	97	78.947	Pan_paniscus
ENSAPLG00000007255	CSTF2	98	78.655	ENSPPRG00000022492	CSTF2	97	78.947	Panthera_pardus
ENSAPLG00000007255	CSTF2	98	78.319	ENSPTIG00000009922	CSTF2	97	78.608	Panthera_tigris_altaica
ENSAPLG00000007255	CSTF2	98	78.487	ENSPTRG00000022090	CSTF2	97	78.947	Pan_troglodytes
ENSAPLG00000007255	CSTF2	98	78.151	ENSPANG00000002303	CSTF2	97	78.608	Papio_anubis
ENSAPLG00000007255	CSTF2	100	61.462	ENSPKIG00000005033	cstf2	91	63.667	Paramormyrops_kingsleyae
ENSAPLG00000007255	CSTF2	83	83.613	ENSPMGG00000006534	cstf2	94	59.933	Periophthalmus_magnuspinnatus
ENSAPLG00000007255	CSTF2	98	73.077	ENSPEMG00000019415	Cstf2	97	73.534	Peromyscus_maniculatus_bairdii
ENSAPLG00000007255	CSTF2	98	78.523	ENSPCIG00000002989	CSTF2	97	80.034	Phascolarctos_cinereus
ENSAPLG00000007255	CSTF2	83	82.353	ENSPLAG00000011176	cstf2	94	55.921	Poecilia_latipinna
ENSAPLG00000007255	CSTF2	83	82.353	ENSPMEG00000017743	cstf2	94	55.757	Poecilia_mexicana
ENSAPLG00000007255	CSTF2	98	78.319	ENSPPYG00000020541	CSTF2	97	78.778	Pongo_abelii
ENSAPLG00000007255	CSTF2	98	79.322	ENSPCOG00000027744	CSTF2	97	79.795	Propithecus_coquereli
ENSAPLG00000007255	CSTF2	97	62.925	ENSPVAG00000008342	CSTF2	100	62.034	Pteropus_vampyrus
ENSAPLG00000007255	CSTF2	81	84.914	ENSPNYG00000010852	cstf2	90	90.000	Pundamilia_nyererei
ENSAPLG00000007255	CSTF2	98	60.204	ENSPNAG00000018887	cstf2	95	61.578	Pygocentrus_nattereri
ENSAPLG00000007255	CSTF2	98	73.862	ENSRNOG00000048025	Cstf2	97	74.957	Rattus_norvegicus
ENSAPLG00000007255	CSTF2	98	74.407	ENSRBIG00000030745	CSTF2	97	75.000	Rhinopithecus_bieti
ENSAPLG00000007255	CSTF2	98	78.151	ENSRROG00000045042	CSTF2	97	78.608	Rhinopithecus_roxellana
ENSAPLG00000007255	CSTF2	98	77.966	ENSSBOG00000021649	CSTF2	97	78.425	Saimiri_boliviensis_boliviensis
ENSAPLG00000007255	CSTF2	97	78.741	ENSSHAG00000003681	CSTF2	92	80.069	Sarcophilus_harrisii
ENSAPLG00000007255	CSTF2	98	61.785	ENSSFOG00015006348	cstf2	95	62.988	Scleropages_formosus
ENSAPLG00000007255	CSTF2	82	83.193	ENSSMAG00000013463	cstf2	93	58.615	Scophthalmus_maximus
ENSAPLG00000007255	CSTF2	79	82.390	ENSSPUG00000005288	-	99	83.726	Sphenodon_punctatus
ENSAPLG00000007255	CSTF2	98	78.305	ENSSSCG00000012486	CSTF2	96	82.796	Sus_scrofa
ENSAPLG00000007255	CSTF2	98	90.452	ENSTGUG00000002253	CSTF2	97	91.201	Taeniopygia_guttata
ENSAPLG00000007255	CSTF2	99	58.320	ENSTNIG00000016860	cstf2	96	58.944	Tetraodon_nigroviridis
ENSAPLG00000007255	CSTF2	54	100.000	ENSTBEG00000010029	-	59	100.000	Tupaia_belangeri
ENSAPLG00000007255	CSTF2	98	75.294	ENSTTRG00000013556	CSTF2	97	75.552	Tursiops_truncatus
ENSAPLG00000007255	CSTF2	98	78.333	ENSUAMG00000026605	CSTF2	97	78.620	Ursus_americanus
ENSAPLG00000007255	CSTF2	98	76.280	ENSUMAG00000012417	CSTF2	97	76.207	Ursus_maritimus
ENSAPLG00000007255	CSTF2	72	77.493	ENSVPAG00000006466	CSTF2	67	77.429	Vicugna_pacos
ENSAPLG00000007255	CSTF2	98	75.798	ENSVVUG00000004717	CSTF2	97	76.061	Vulpes_vulpes
ENSAPLG00000007255	CSTF2	98	62.925	ENSXETG00000009642	cstf2	96	64.856	Xenopus_tropicalis
ENSAPLG00000007255	CSTF2	60	75.745	ENSXCOG00000016436	cstf2	58	96.226	Xiphophorus_couchianus
ENSAPLG00000007255	CSTF2	75	80.498	ENSXMAG00000013524	cstf2	94	59.391	Xiphophorus_maculatus