EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000007666 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 34405 bases
Position: chrKB743832.1:102706-137110
Accession: 101804577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000007327	SpoU_methylase	PF00588.19	1.1e-29	1	1
ENSAPLP00000007322	SpoU_methylase	PF00588.19	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000007987	TARBP1-202	3927	XM_005025759	ENSAPLP00000007327	1309 (aa)	XP_012960755	U3IJA5
ENSAPLT00000007982	TARBP1-201	4107	-	ENSAPLP00000007322	1369 (aa)	-	U3IJA0

Gene Model

Click here to download ENSAPLG00000007666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000007666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000007666	TARBP1	100	67.516	ENSG00000059588	TARBP1	84	67.516	Homo_sapiens
ENSAPLG00000007666	TARBP1	99	46.275	ENSAPOG00000016419	si:dkey-85a20.4	83	45.965	Acanthochromis_polyacanthus
ENSAPLG00000007666	TARBP1	99	67.631	ENSAMEG00000003359	TARBP1	99	66.861	Ailuropoda_melanoleuca
ENSAPLG00000007666	TARBP1	99	46.321	ENSATEG00000020266	si:dkey-85a20.4	83	45.833	Anabas_testudineus
ENSAPLG00000007666	TARBP1	98	66.641	ENSACAG00000001142	TARBP1	84	65.262	Anolis_carolinensis
ENSAPLG00000007666	TARBP1	99	67.103	ENSANAG00000022031	TARBP1	86	65.623	Aotus_nancymaae
ENSAPLG00000007666	TARBP1	94	75.937	ENSBTAG00000004517	TARBP1	82	75.937	Bos_taurus
ENSAPLG00000007666	TARBP1	99	68.417	ENSCJAG00000018155	TARBP1	84	67.516	Callithrix_jacchus
ENSAPLG00000007666	TARBP1	99	67.808	ENSCAFG00000011533	TARBP1	96	67.299	Canis_familiaris
ENSAPLG00000007666	TARBP1	99	67.683	ENSCAFG00020027141	TARBP1	84	67.128	Canis_lupus_dingo
ENSAPLG00000007666	TARBP1	99	66.947	ENSCHIG00000011437	TARBP1	83	66.251	Capra_hircus
ENSAPLG00000007666	TARBP1	99	66.972	ENSTSYG00000010382	TARBP1	99	66.119	Carlito_syrichta
ENSAPLG00000007666	TARBP1	97	57.109	ENSCAPG00000010831	TARBP1	99	57.176	Cavia_aperea
ENSAPLG00000007666	TARBP1	99	63.817	ENSCPOG00000013995	TARBP1	85	63.085	Cavia_porcellus
ENSAPLG00000007666	TARBP1	100	67.225	ENSCCAG00000037278	TARBP1	84	67.371	Cebus_capucinus
ENSAPLG00000007666	TARBP1	100	67.615	ENSCATG00000011754	TARBP1	84	67.615	Cercocebus_atys
ENSAPLG00000007666	TARBP1	99	64.198	ENSCLAG00000003655	TARBP1	96	64.307	Chinchilla_lanigera
ENSAPLG00000007666	TARBP1	98	68.556	ENSCSAG00000010100	TARBP1	100	68.600	Chlorocebus_sabaeus
ENSAPLG00000007666	TARBP1	94	77.841	ENSCPBG00000005587	TARBP1	78	82.576	Chrysemys_picta_bellii
ENSAPLG00000007666	TARBP1	100	67.542	ENSCANG00000034343	TARBP1	99	67.542	Colobus_angolensis_palliatus
ENSAPLG00000007666	TARBP1	99	63.588	ENSCGRG00001016690	Tarbp1	85	62.930	Cricetulus_griseus_chok1gshd
ENSAPLG00000007666	TARBP1	99	63.588	ENSCGRG00000016893	Tarbp1	92	62.930	Cricetulus_griseus_crigri
ENSAPLG00000007666	TARBP1	99	42.564	ENSCSEG00000005255	si:dkey-85a20.4	83	46.715	Cynoglossus_semilaevis
ENSAPLG00000007666	TARBP1	99	46.813	ENSDARG00000079055	si:dkey-85a20.4	99	55.746	Danio_rerio
ENSAPLG00000007666	TARBP1	99	68.764	ENSDNOG00000008637	TARBP1	82	67.733	Dasypus_novemcinctus
ENSAPLG00000007666	TARBP1	99	62.653	ENSDORG00000007984	Tarbp1	100	62.807	Dipodomys_ordii
ENSAPLG00000007666	TARBP1	99	69.512	ENSEASG00005000252	TARBP1	84	68.321	Equus_asinus_asinus
ENSAPLG00000007666	TARBP1	99	69.595	ENSECAG00000023673	TARBP1	84	68.540	Equus_caballus
ENSAPLG00000007666	TARBP1	99	45.626	ENSELUG00000012193	si:dkey-85a20.4	84	45.022	Esox_lucius
ENSAPLG00000007666	TARBP1	99	65.599	ENSFCAG00000014183	TARBP1	83	64.822	Felis_catus
ENSAPLG00000007666	TARBP1	99	86.769	ENSFALG00000013565	TARBP1	99	86.784	Ficedula_albicollis
ENSAPLG00000007666	TARBP1	98	62.901	ENSFDAG00000001308	TARBP1	99	63.053	Fukomys_damarensis
ENSAPLG00000007666	TARBP1	92	53.846	ENSFHEG00000007565	si:dkey-85a20.4	81	53.846	Fundulus_heteroclitus
ENSAPLG00000007666	TARBP1	99	43.609	ENSGMOG00000004549	si:dkey-85a20.4	98	43.228	Gadus_morhua
ENSAPLG00000007666	TARBP1	99	75.455	ENSGALG00000011000	TARBP1	84	77.193	Gallus_gallus
ENSAPLG00000007666	TARBP1	99	46.927	ENSGAFG00000007387	si:dkey-85a20.4	83	46.126	Gambusia_affinis
ENSAPLG00000007666	TARBP1	100	45.090	ENSGACG00000005865	si:dkey-85a20.4	97	45.090	Gasterosteus_aculeatus
ENSAPLG00000007666	TARBP1	99	79.407	ENSGAGG00000012102	TARBP1	87	77.624	Gopherus_agassizii
ENSAPLG00000007666	TARBP1	100	65.189	ENSGGOG00000022879	TARBP1	99	65.189	Gorilla_gorilla
ENSAPLG00000007666	TARBP1	99	47.914	ENSHBUG00000008877	si:dkey-85a20.4	83	47.674	Haplochromis_burtoni
ENSAPLG00000007666	TARBP1	99	65.344	ENSHGLG00000011592	TARBP1	85	64.719	Heterocephalus_glaber_female
ENSAPLG00000007666	TARBP1	99	65.673	ENSHGLG00100015169	TARBP1	93	64.500	Heterocephalus_glaber_male
ENSAPLG00000007666	TARBP1	98	45.434	ENSIPUG00000005249	si:dkey-85a20.4	81	44.696	Ictalurus_punctatus
ENSAPLG00000007666	TARBP1	99	63.226	ENSSTOG00000032291	TARBP1	96	62.628	Ictidomys_tridecemlineatus
ENSAPLG00000007666	TARBP1	99	60.227	ENSJJAG00000017840	Tarbp1	93	59.796	Jaculus_jaculus
ENSAPLG00000007666	TARBP1	76	48.396	ENSKMAG00000017546	si:dkey-85a20.4	82	45.902	Kryptolebias_marmoratus
ENSAPLG00000007666	TARBP1	75	51.747	ENSLBEG00000012132	si:dkey-85a20.4	71	51.747	Labrus_bergylta
ENSAPLG00000007666	TARBP1	99	56.818	ENSLACG00000004337	TARBP1	83	55.927	Latimeria_chalumnae
ENSAPLG00000007666	TARBP1	99	51.173	ENSLOCG00000016214	si:dkey-85a20.4	83	50.652	Lepisosteus_oculatus
ENSAPLG00000007666	TARBP1	99	68.493	ENSLAFG00000011394	TARBP1	86	67.566	Loxodonta_africana
ENSAPLG00000007666	TARBP1	100	65.864	ENSMFAG00000041068	TARBP1	85	65.864	Macaca_fascicularis
ENSAPLG00000007666	TARBP1	100	65.864	ENSMMUG00000021703	TARBP1	83	65.864	Macaca_mulatta
ENSAPLG00000007666	TARBP1	100	67.688	ENSMNEG00000045002	TARBP1	84	67.688	Macaca_nemestrina
ENSAPLG00000007666	TARBP1	99	68.521	ENSMLEG00000044182	TARBP1	100	67.641	Mandrillus_leucophaeus
ENSAPLG00000007666	TARBP1	99	46.218	ENSMAMG00000021760	si:dkey-85a20.4	84	45.858	Mastacembelus_armatus
ENSAPLG00000007666	TARBP1	99	47.839	ENSMZEG00005005751	si:dkey-85a20.4	83	47.602	Maylandia_zebra
ENSAPLG00000007666	TARBP1	99	63.254	ENSMAUG00000020968	Tarbp1	85	62.491	Mesocricetus_auratus
ENSAPLG00000007666	TARBP1	99	61.644	ENSMICG00000015280	TARBP1	82	61.140	Microcebus_murinus
ENSAPLG00000007666	TARBP1	99	62.376	ENSMOCG00000004128	Tarbp1	85	61.713	Microtus_ochrogaster
ENSAPLG00000007666	TARBP1	99	43.897	ENSMMOG00000007795	si:dkey-85a20.4	83	43.302	Mola_mola
ENSAPLG00000007666	TARBP1	99	70.633	ENSMODG00000008504	TARBP1	82	69.192	Monodelphis_domestica
ENSAPLG00000007666	TARBP1	99	46.160	ENSMALG00000002916	si:dkey-85a20.4	83	45.779	Monopterus_albus
ENSAPLG00000007666	TARBP1	99	62.977	MGP_CAROLIEiJ_G0031729	Tarbp1	78	77.432	Mus_caroli
ENSAPLG00000007666	TARBP1	99	62.881	ENSMUSG00000090290	Tarbp1	85	62.016	Mus_musculus
ENSAPLG00000007666	TARBP1	99	62.833	MGP_PahariEiJ_G0023326	Tarbp1	85	62.144	Mus_pahari
ENSAPLG00000007666	TARBP1	99	62.729	MGP_SPRETEiJ_G0032846	Tarbp1	85	61.870	Mus_spretus
ENSAPLG00000007666	TARBP1	95	66.613	ENSMPUG00000002802	TARBP1	99	66.613	Mustela_putorius_furo
ENSAPLG00000007666	TARBP1	99	62.291	ENSMLUG00000002414	TARBP1	99	61.853	Myotis_lucifugus
ENSAPLG00000007666	TARBP1	99	68.721	ENSNLEG00000002518	TARBP1	84	67.808	Nomascus_leucogenys
ENSAPLG00000007666	TARBP1	79	74.167	ENSOPRG00000013822	TARBP1	67	74.167	Ochotona_princeps
ENSAPLG00000007666	TARBP1	99	64.580	ENSODEG00000005238	TARBP1	88	63.810	Octodon_degus
ENSAPLG00000007666	TARBP1	99	47.765	ENSONIG00000009789	si:dkey-85a20.4	97	47.350	Oreochromis_niloticus
ENSAPLG00000007666	TARBP1	99	67.226	ENSOCUG00000017418	TARBP1	83	66.181	Oryctolagus_cuniculus
ENSAPLG00000007666	TARBP1	99	45.038	ENSORLG00000010529	si:dkey-85a20.4	83	44.957	Oryzias_latipes
ENSAPLG00000007666	TARBP1	99	45.038	ENSORLG00020019264	si:dkey-85a20.4	83	45.029	Oryzias_latipes_hni
ENSAPLG00000007666	TARBP1	99	44.872	ENSORLG00015003276	si:dkey-85a20.4	83	44.813	Oryzias_latipes_hsok
ENSAPLG00000007666	TARBP1	99	65.601	ENSOGAG00000002379	TARBP1	84	64.530	Otolemur_garnettii
ENSAPLG00000007666	TARBP1	99	66.972	ENSOARG00000003434	TARBP1	90	66.276	Ovis_aries
ENSAPLG00000007666	TARBP1	99	68.417	ENSPPAG00000028097	TARBP1	99	67.516	Pan_paniscus
ENSAPLG00000007666	TARBP1	99	65.954	ENSPPRG00000013561	TARBP1	87	65.160	Panthera_pardus
ENSAPLG00000007666	TARBP1	99	68.015	ENSPTIG00000009281	TARBP1	99	67.207	Panthera_tigris_altaica
ENSAPLG00000007666	TARBP1	99	68.493	ENSPTRG00000002124	TARBP1	84	67.589	Pan_troglodytes
ENSAPLG00000007666	TARBP1	100	67.761	ENSPANG00000021933	TARBP1	84	67.761	Papio_anubis
ENSAPLG00000007666	TARBP1	99	47.195	ENSPKIG00000016716	si:dkey-85a20.4	82	46.945	Paramormyrops_kingsleyae
ENSAPLG00000007666	TARBP1	98	78.123	ENSPSIG00000010699	TARBP1	100	77.683	Pelodiscus_sinensis
ENSAPLG00000007666	TARBP1	99	63.616	ENSPEMG00000006888	Tarbp1	90	62.930	Peromyscus_maniculatus_bairdii
ENSAPLG00000007666	TARBP1	90	87.685	ENSPCIG00000029710	TARBP1	81	85.437	Phascolarctos_cinereus
ENSAPLG00000007666	TARBP1	99	46.217	ENSPFOG00000013020	si:dkey-85a20.4	97	45.644	Poecilia_formosa
ENSAPLG00000007666	TARBP1	99	46.252	ENSPLAG00000006044	si:dkey-85a20.4	83	45.690	Poecilia_latipinna
ENSAPLG00000007666	TARBP1	99	46.067	ENSPMEG00000017857	si:dkey-85a20.4	83	45.513	Poecilia_mexicana
ENSAPLG00000007666	TARBP1	99	47.006	ENSPREG00000022753	si:dkey-85a20.4	83	46.347	Poecilia_reticulata
ENSAPLG00000007666	TARBP1	88	70.370	ENSPPYG00000000102	TARBP1	82	67.442	Pongo_abelii
ENSAPLG00000007666	TARBP1	82	85.621	ENSPCAG00000004808	TARBP1	67	85.621	Procavia_capensis
ENSAPLG00000007666	TARBP1	99	65.980	ENSPCOG00000005666	TARBP1	83	65.135	Propithecus_coquereli
ENSAPLG00000007666	TARBP1	99	56.217	ENSPVAG00000014798	TARBP1	84	55.036	Pteropus_vampyrus
ENSAPLG00000007666	TARBP1	99	46.833	ENSPNYG00000019135	si:dkey-85a20.4	83	46.744	Pundamilia_nyererei
ENSAPLG00000007666	TARBP1	99	59.437	ENSRNOG00000053574	Tarbp1	85	58.656	Rattus_norvegicus
ENSAPLG00000007666	TARBP1	100	63.676	ENSRBIG00000043362	TARBP1	92	63.676	Rhinopithecus_bieti
ENSAPLG00000007666	TARBP1	100	67.761	ENSRROG00000029527	TARBP1	87	67.761	Rhinopithecus_roxellana
ENSAPLG00000007666	TARBP1	99	68.137	ENSSBOG00000034503	TARBP1	97	67.348	Saimiri_boliviensis_boliviensis
ENSAPLG00000007666	TARBP1	99	70.365	ENSSHAG00000000013	TARBP1	99	68.960	Sarcophilus_harrisii
ENSAPLG00000007666	TARBP1	99	47.541	ENSSFOG00015002660	si:dkey-85a20.4	97	47.541	Scleropages_formosus
ENSAPLG00000007666	TARBP1	99	47.214	ENSSMAG00000007081	si:dkey-85a20.4	82	46.585	Scophthalmus_maximus
ENSAPLG00000007666	TARBP1	99	45.000	ENSSDUG00000023566	si:dkey-85a20.4	83	44.412	Seriola_dumerili
ENSAPLG00000007666	TARBP1	99	46.842	ENSSLDG00000020200	si:dkey-85a20.4	83	46.148	Seriola_lalandi_dorsalis
ENSAPLG00000007666	TARBP1	94	78.372	ENSSARG00000012207	TARBP1	76	78.372	Sorex_araneus
ENSAPLG00000007666	TARBP1	99	72.298	ENSSPUG00000015364	TARBP1	84	70.712	Sphenodon_punctatus
ENSAPLG00000007666	TARBP1	99	46.611	ENSSPAG00000007213	si:dkey-85a20.4	83	46.182	Stegastes_partitus
ENSAPLG00000007666	TARBP1	94	78.862	ENSSSCG00000010160	TARBP1	79	78.862	Sus_scrofa
ENSAPLG00000007666	TARBP1	99	87.605	ENSTGUG00000010214	TARBP1	100	87.605	Taeniopygia_guttata
ENSAPLG00000007666	TARBP1	99	46.073	ENSTNIG00000016586	si:dkey-85a20.4	99	46.109	Tetraodon_nigroviridis
ENSAPLG00000007666	TARBP1	94	63.893	ENSTTRG00000008707	TARBP1	83	63.032	Tursiops_truncatus
ENSAPLG00000007666	TARBP1	99	67.022	ENSUMAG00000006730	TARBP1	99	66.443	Ursus_maritimus
ENSAPLG00000007666	TARBP1	77	89.362	ENSVPAG00000007665	TARBP1	74	89.362	Vicugna_pacos
ENSAPLG00000007666	TARBP1	99	67.912	ENSVVUG00000007460	TARBP1	97	68.980	Vulpes_vulpes
ENSAPLG00000007666	TARBP1	99	57.294	ENSXETG00000016224	tarbp1	99	56.594	Xenopus_tropicalis
ENSAPLG00000007666	TARBP1	91	51.362	ENSXCOG00000011779	si:dkey-85a20.4	91	51.362	Xiphophorus_couchianus
ENSAPLG00000007666	TARBP1	80	45.362	ENSXMAG00000009600	si:dkey-85a20.4	100	45.362	Xiphophorus_maculatus