EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAPLG00000008797 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Anas_platyrhynchos
Status
putative
Strand
Plus strand
Length
16628 bases
Position
chrKB742563.1:185233-201860
Accession
101793989
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPLP00000008566CSDPF00313.225.4e-8315
ENSAPLP00000008566CSDPF00313.225.4e-8325
ENSAPLP00000008566CSDPF00313.225.4e-8335
ENSAPLP00000008566CSDPF00313.225.4e-8345
ENSAPLP00000008566CSDPF00313.225.4e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPLT00000009248CSDE1-2013439XM_005011708ENSAPLP00000008566765 (aa)XP_005011766U3IMU3
Gene Model
Click here to download ENSAPLG00000008797's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000008797's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPLG00000008797CSDE110091.917ENSG00000009307CSDE1100100.000Homo_sapiens
ENSAPLG00000008797CSDE110079.714ENSAPOG00000015538csde110079.714Acanthochromis_polyacanthus
ENSAPLG00000008797CSDE110091.004ENSAMEG00000017129CSDE19491.004Ailuropoda_melanoleuca
ENSAPLG00000008797CSDE18780.811ENSACIG00000015175csde110080.811Amphilophus_citrinellus
ENSAPLG00000008797CSDE110079.844ENSAOCG00000011510csde110079.844Amphiprion_ocellaris
ENSAPLG00000008797CSDE110079.844ENSAPEG00000007194csde110079.844Amphiprion_percula
ENSAPLG00000008797CSDE110079.221ENSATEG00000003864csde110079.221Anabas_testudineus
ENSAPLG00000008797CSDE110091.709ENSACAG00000003120CSDE110091.709Anolis_carolinensis
ENSAPLG00000008797CSDE110092.047ENSANAG00000024665CSDE19592.047Aotus_nancymaae
ENSAPLG00000008797CSDE19371.631ENSANAG00000028396-9071.631Aotus_nancymaae
ENSAPLG00000008797CSDE110079.064ENSACLG00000013296csde110079.454Astatotilapia_calliptera
ENSAPLG00000008797CSDE110077.951ENSAMXG00000007436csde110077.951Astyanax_mexicanus
ENSAPLG00000008797CSDE110091.525ENSBTAG00000000678CSDE110091.525Bos_taurus
ENSAPLG00000008797CSDE110092.047ENSCJAG00000012565CSDE19492.047Callithrix_jacchus
ENSAPLG00000008797CSDE19892.011ENSCAFG00000009618CSDE19492.011Canis_familiaris
ENSAPLG00000008797CSDE110092.047ENSCAFG00020000481CSDE110092.047Canis_lupus_dingo
ENSAPLG00000008797CSDE110091.656ENSCHIG00000017250CSDE110091.656Capra_hircus
ENSAPLG00000008797CSDE110092.177ENSTSYG00000003747CSDE110092.177Carlito_syrichta
ENSAPLG00000008797CSDE110063.442ENSCAPG00000015128CSDE110063.442Cavia_aperea
ENSAPLG00000008797CSDE110085.678ENSCPOG00000040388CSDE110085.678Cavia_porcellus
ENSAPLG00000008797CSDE110092.047ENSCCAG00000036794CSDE110088.471Cebus_capucinus
ENSAPLG00000008797CSDE19665.702ENSCCAG00000030878-9165.702Cebus_capucinus
ENSAPLG00000008797CSDE19566.337ENSCCAG00000033677-9966.271Cebus_capucinus
ENSAPLG00000008797CSDE110091.917ENSCATG00000036962CSDE19791.917Cercocebus_atys
ENSAPLG00000008797CSDE110091.786ENSCLAG00000006618CSDE110091.786Chinchilla_lanigera
ENSAPLG00000008797CSDE110088.346ENSCSAG00000001658CSDE19588.346Chlorocebus_sabaeus
ENSAPLG00000008797CSDE110087.229ENSCHOG00000000918CSDE18987.229Choloepus_hoffmanni
ENSAPLG00000008797CSDE110095.686ENSCPBG00000016547CSDE110095.686Chrysemys_picta_bellii
ENSAPLG00000008797CSDE19741.481ENSCING00000014465-9641.481Ciona_intestinalis
ENSAPLG00000008797CSDE19641.284ENSCSAVG00000008100-9841.284Ciona_savignyi
ENSAPLG00000008797CSDE18992.937ENSCANG00000031069-9492.937Colobus_angolensis_palliatus
ENSAPLG00000008797CSDE110091.917ENSCANG00000035096CSDE19791.917Colobus_angolensis_palliatus
ENSAPLG00000008797CSDE110075.750ENSCGRG00001014011-10075.750Cricetulus_griseus_chok1gshd
ENSAPLG00000008797CSDE110091.265ENSCGRG00001016833-10091.265Cricetulus_griseus_chok1gshd
ENSAPLG00000008797CSDE110083.478ENSCGRG00000005831-10083.478Cricetulus_griseus_crigri
ENSAPLG00000008797CSDE19687.528ENSCGRG00000002225-10087.528Cricetulus_griseus_crigri
ENSAPLG00000008797CSDE110078.414ENSCSEG00000002620csde110078.414Cynoglossus_semilaevis
ENSAPLG00000008797CSDE110079.064ENSCVAG00000001344csde110079.064Cyprinodon_variegatus
ENSAPLG00000008797CSDE110077.096ENSDARG00000074758csde110077.513Danio_rerio
ENSAPLG00000008797CSDE110091.667ENSDNOG00000010287-9391.667Dasypus_novemcinctus
ENSAPLG00000008797CSDE18266.160ENSDNOG00000034464-10066.160Dasypus_novemcinctus
ENSAPLG00000008797CSDE19990.419ENSDORG00000011609Csde110090.419Dipodomys_ordii
ENSAPLG00000008797CSDE19747.746FBgn0263352Unr7547.177Drosophila_melanogaster
ENSAPLG00000008797CSDE17963.742ENSETEG00000007109-9963.742Echinops_telfairi
ENSAPLG00000008797CSDE19995.868ENSETEG00000002491-7495.868Echinops_telfairi
ENSAPLG00000008797CSDE19082.120ENSETEG00000006280-10082.120Echinops_telfairi
ENSAPLG00000008797CSDE19972.157ENSETEG00000013678-9972.157Echinops_telfairi
ENSAPLG00000008797CSDE19953.941ENSEBUG00000008647csde19952.267Eptatretus_burgeri
ENSAPLG00000008797CSDE110092.047ENSEASG00005006284CSDE110088.471Equus_asinus_asinus
ENSAPLG00000008797CSDE110092.047ENSECAG00000020885CSDE19991.433Equus_caballus
ENSAPLG00000008797CSDE19296.238ENSEEUG00000006286CSDE16896.238Erinaceus_europaeus
ENSAPLG00000008797CSDE110077.102ENSELUG00000015507csde110077.102Esox_lucius
ENSAPLG00000008797CSDE110091.917ENSFCAG00000029266CSDE110091.917Felis_catus
ENSAPLG00000008797CSDE110094.724ENSFALG00000003407CSDE110094.724Ficedula_albicollis
ENSAPLG00000008797CSDE19990.719ENSFDAG00000007882CSDE110090.719Fukomys_damarensis
ENSAPLG00000008797CSDE19879.101ENSFHEG00000010799csde19979.101Fundulus_heteroclitus
ENSAPLG00000008797CSDE19975.533ENSGMOG00000012731csde110075.533Gadus_morhua
ENSAPLG00000008797CSDE19895.775ENSGALG00000002139CSDE19895.775Gallus_gallus
ENSAPLG00000008797CSDE19279.268ENSGAFG00000005241csde19579.268Gambusia_affinis
ENSAPLG00000008797CSDE19976.942ENSGACG00000004544csde110076.942Gasterosteus_aculeatus
ENSAPLG00000008797CSDE110095.686ENSGAGG00000017685CSDE110091.960Gopherus_agassizii
ENSAPLG00000008797CSDE110091.917ENSGGOG00000002164CSDE110091.917Gorilla_gorilla
ENSAPLG00000008797CSDE110079.064ENSHBUG00000020315csde110079.454Haplochromis_burtoni
ENSAPLG00000008797CSDE19981.287ENSHGLG00000008555-10081.287Heterocephalus_glaber_female
ENSAPLG00000008797CSDE19979.501ENSHGLG00000007471-9879.501Heterocephalus_glaber_female
ENSAPLG00000008797CSDE19679.065ENSHGLG00000010039-10079.065Heterocephalus_glaber_female
ENSAPLG00000008797CSDE110074.747ENSHGLG00000019549-10074.747Heterocephalus_glaber_female
ENSAPLG00000008797CSDE110082.529ENSHGLG00000003829-10082.529Heterocephalus_glaber_female
ENSAPLG00000008797CSDE110082.790ENSHGLG00000009620-10083.051Heterocephalus_glaber_female
ENSAPLG00000008797CSDE19968.758ENSHGLG00000000650-9968.758Heterocephalus_glaber_female
ENSAPLG00000008797CSDE19679.287ENSHGLG00100006910-10079.287Heterocephalus_glaber_male
ENSAPLG00000008797CSDE19974.844ENSHGLG00100002245-9974.844Heterocephalus_glaber_male
ENSAPLG00000008797CSDE19378.042ENSHGLG00100004195-10078.042Heterocephalus_glaber_male
ENSAPLG00000008797CSDE110077.836ENSHGLG00100012072-10077.836Heterocephalus_glaber_male
ENSAPLG00000008797CSDE19977.165ENSHGLG00100007287-9877.165Heterocephalus_glaber_male
ENSAPLG00000008797CSDE110074.740ENSHGLG00100001846-10074.740Heterocephalus_glaber_male
ENSAPLG00000008797CSDE110091.656ENSHGLG00100019438-10091.656Heterocephalus_glaber_male
ENSAPLG00000008797CSDE19972.606ENSHGLG00100004833-10072.606Heterocephalus_glaber_male
ENSAPLG00000008797CSDE110077.633ENSHCOG00000004158csde110077.633Hippocampus_comes
ENSAPLG00000008797CSDE110077.951ENSIPUG00000000355csde110077.951Ictalurus_punctatus
ENSAPLG00000008797CSDE19276.282ENSSTOG00000032722-9876.282Ictidomys_tridecemlineatus
ENSAPLG00000008797CSDE110075.256ENSSTOG00000030994-10075.256Ictidomys_tridecemlineatus
ENSAPLG00000008797CSDE19990.719ENSJJAG00000019571Csde110090.719Jaculus_jaculus
ENSAPLG00000008797CSDE110075.841ENSKMAG00000005685csde110075.465Kryptolebias_marmoratus
ENSAPLG00000008797CSDE110079.740ENSLBEG00000014770csde110079.740Labrus_bergylta
ENSAPLG00000008797CSDE110076.799ENSLACG00000018452CSDE19476.799Latimeria_chalumnae
ENSAPLG00000008797CSDE110079.119ENSLOCG00000010413csde19479.119Lepisosteus_oculatus
ENSAPLG00000008797CSDE110091.786ENSLAFG00000007150CSDE19691.786Loxodonta_africana
ENSAPLG00000008797CSDE110091.917ENSMFAG00000003674CSDE110091.917Macaca_fascicularis
ENSAPLG00000008797CSDE110091.917ENSMMUG00000001974CSDE110091.917Macaca_mulatta
ENSAPLG00000008797CSDE110091.917ENSMNEG00000045247CSDE19791.917Macaca_nemestrina
ENSAPLG00000008797CSDE110091.656ENSMLEG00000038673CSDE19491.656Mandrillus_leucophaeus
ENSAPLG00000008797CSDE110080.364ENSMAMG00000008821csde110080.364Mastacembelus_armatus
ENSAPLG00000008797CSDE110079.064ENSMZEG00005021675csde110079.454Maylandia_zebra
ENSAPLG00000008797CSDE110099.739ENSMGAG00000016381CSDE110099.739Meleagris_gallopavo
ENSAPLG00000008797CSDE19990.419ENSMAUG00000014031Csde110090.419Mesocricetus_auratus
ENSAPLG00000008797CSDE110091.525ENSMICG00000002050CSDE19691.503Microcebus_murinus
ENSAPLG00000008797CSDE110091.134ENSMOCG00000018960Csde110091.134Microtus_ochrogaster
ENSAPLG00000008797CSDE110079.351ENSMMOG00000015075csde110079.351Mola_mola
ENSAPLG00000008797CSDE110092.068ENSMODG00000004685CSDE110089.348Monodelphis_domestica
ENSAPLG00000008797CSDE110079.610ENSMALG00000007132csde110079.610Monopterus_albus
ENSAPLG00000008797CSDE110091.395MGP_CAROLIEiJ_G0025444Csde110096.026Mus_caroli
ENSAPLG00000008797CSDE110091.265ENSMUSG00000068823Csde110096.026Mus_musculus
ENSAPLG00000008797CSDE110091.265MGP_PahariEiJ_G0026888Csde110096.026Mus_pahari
ENSAPLG00000008797CSDE110091.265MGP_SPRETEiJ_G0026394Csde110096.026Mus_spretus
ENSAPLG00000008797CSDE19888.235ENSMPUG00000005753CSDE19988.235Mustela_putorius_furo
ENSAPLG00000008797CSDE110091.395ENSMLUG00000005681CSDE19491.395Myotis_lucifugus
ENSAPLG00000008797CSDE19990.269ENSNGAG00000021929Csde110090.269Nannospalax_galili
ENSAPLG00000008797CSDE19663.029ENSNGAG00000012599-10063.029Nannospalax_galili
ENSAPLG00000008797CSDE110079.064ENSNBRG00000020808csde110079.454Neolamprologus_brichardi
ENSAPLG00000008797CSDE110091.786ENSNLEG00000004842CSDE19791.786Nomascus_leucogenys
ENSAPLG00000008797CSDE19888.682ENSMEUG00000002677CSDE19988.682Notamacropus_eugenii
ENSAPLG00000008797CSDE19885.487ENSOPRG00000005002CSDE18285.487Ochotona_princeps
ENSAPLG00000008797CSDE19990.569ENSODEG00000007383-10090.569Octodon_degus
ENSAPLG00000008797CSDE19660.398ENSODEG00000005979-9860.398Octodon_degus
ENSAPLG00000008797CSDE110074.786ENSONIG00000009309csde110074.786Oreochromis_niloticus
ENSAPLG00000008797CSDE110074.065ENSOANG00000003346-10074.065Ornithorhynchus_anatinus
ENSAPLG00000008797CSDE110091.525ENSOCUG00000016438CSDE19491.525Oryctolagus_cuniculus
ENSAPLG00000008797CSDE110079.688ENSORLG00000000707csde110079.688Oryzias_latipes
ENSAPLG00000008797CSDE110076.412ENSORLG00020005148csde110074.632Oryzias_latipes_hni
ENSAPLG00000008797CSDE110079.427ENSORLG00015019415csde110079.427Oryzias_latipes_hsok
ENSAPLG00000008797CSDE110079.454ENSOMEG00000015656csde110079.454Oryzias_melastigma
ENSAPLG00000008797CSDE110092.047ENSOGAG00000012127CSDE19492.047Otolemur_garnettii
ENSAPLG00000008797CSDE110091.656ENSOARG00000020034CSDE19491.656Ovis_aries
ENSAPLG00000008797CSDE110091.917ENSPPAG00000025861CSDE110091.917Pan_paniscus
ENSAPLG00000008797CSDE110091.917ENSPPRG00000006747CSDE19491.917Panthera_pardus
ENSAPLG00000008797CSDE110091.917ENSPTIG00000015468CSDE110088.346Panthera_tigris_altaica
ENSAPLG00000008797CSDE110091.917ENSPTRG00000033721CSDE19791.917Pan_troglodytes
ENSAPLG00000008797CSDE110091.917ENSPANG00000018873CSDE110091.917Papio_anubis
ENSAPLG00000008797CSDE110078.255ENSPKIG00000009459csde110078.255Paramormyrops_kingsleyae
ENSAPLG00000008797CSDE19590.222ENSPSIG00000003823CSDE19690.222Pelodiscus_sinensis
ENSAPLG00000008797CSDE110078.674ENSPMGG00000000772csde110078.674Periophthalmus_magnuspinnatus
ENSAPLG00000008797CSDE19990.569ENSPEMG00000020357-10090.569Peromyscus_maniculatus_bairdii
ENSAPLG00000008797CSDE110089.599ENSPCIG00000022587CSDE110089.599Phascolarctos_cinereus
ENSAPLG00000008797CSDE19977.795ENSPFOG00000012664csde110078.261Poecilia_formosa
ENSAPLG00000008797CSDE19773.425ENSPLAG00000017680csde19373.425Poecilia_latipinna
ENSAPLG00000008797CSDE19873.293ENSPMEG00000005094csde19673.293Poecilia_mexicana
ENSAPLG00000008797CSDE110075.686ENSPREG00000011631csde110073.494Poecilia_reticulata
ENSAPLG00000008797CSDE110088.221ENSPPYG00000000996CSDE110088.221Pongo_abelii
ENSAPLG00000008797CSDE110087.744ENSPCAG00000014368CSDE19487.744Procavia_capensis
ENSAPLG00000008797CSDE19081.343ENSPCOG00000008223-9081.343Propithecus_coquereli
ENSAPLG00000008797CSDE110091.786ENSPCOG00000017893CSDE110091.786Propithecus_coquereli
ENSAPLG00000008797CSDE110086.310ENSPVAG00000008225CSDE19586.310Pteropus_vampyrus
ENSAPLG00000008797CSDE110079.064ENSPNYG00000013745csde110079.454Pundamilia_nyererei
ENSAPLG00000008797CSDE110078.442ENSPNAG00000001958csde110078.442Pygocentrus_nattereri
ENSAPLG00000008797CSDE110087.594ENSRNOG00000061058Csde110087.594Rattus_norvegicus
ENSAPLG00000008797CSDE110088.672ENSRBIG00000038088-10088.672Rhinopithecus_bieti
ENSAPLG00000008797CSDE110086.528ENSRBIG00000038966-9486.528Rhinopithecus_bieti
ENSAPLG00000008797CSDE110091.917ENSRROG00000043101CSDE19791.917Rhinopithecus_roxellana
ENSAPLG00000008797CSDE110092.047ENSSBOG00000035592CSDE19592.047Saimiri_boliviensis_boliviensis
ENSAPLG00000008797CSDE110093.090ENSSHAG00000009831CSDE110093.090Sarcophilus_harrisii
ENSAPLG00000008797CSDE110079.454ENSSFOG00015007498csde110079.454Scleropages_formosus
ENSAPLG00000008797CSDE110079.714ENSSMAG00000007203csde110079.714Scophthalmus_maximus
ENSAPLG00000008797CSDE110079.844ENSSDUG00000015380csde110079.844Seriola_dumerili
ENSAPLG00000008797CSDE110079.844ENSSLDG00000008819csde110079.844Seriola_lalandi_dorsalis
ENSAPLG00000008797CSDE110091.917ENSSARG00000000738CSDE19491.917Sorex_araneus
ENSAPLG00000008797CSDE110096.732ENSSPUG00000008714CSDE110096.732Sphenodon_punctatus
ENSAPLG00000008797CSDE110080.104ENSSPAG00000000716csde110080.104Stegastes_partitus
ENSAPLG00000008797CSDE110091.917ENSSSCG00000006752CSDE110091.917Sus_scrofa
ENSAPLG00000008797CSDE110093.609ENSTGUG00000000972CSDE110093.609Taeniopygia_guttata
ENSAPLG00000008797CSDE110077.053ENSTRUG00000007996csde110077.053Takifugu_rubripes
ENSAPLG00000008797CSDE19375.479ENSTNIG00000010878csde110075.479Tetraodon_nigroviridis
ENSAPLG00000008797CSDE18196.933ENSTBEG00000011880-6096.933Tupaia_belangeri
ENSAPLG00000008797CSDE110091.525ENSTTRG00000015583CSDE19491.525Tursiops_truncatus
ENSAPLG00000008797CSDE18595.114ENSUAMG00000021779-9995.114Ursus_americanus
ENSAPLG00000008797CSDE18986.957ENSUAMG00000024289-9986.957Ursus_americanus
ENSAPLG00000008797CSDE110084.746ENSUMAG00000009720-9784.746Ursus_maritimus
ENSAPLG00000008797CSDE18687.411ENSUMAG00000011714-9987.411Ursus_maritimus
ENSAPLG00000008797CSDE110094.393ENSVPAG00000000749CSDE17994.393Vicugna_pacos
ENSAPLG00000008797CSDE19087.427ENSVVUG00000009890CSDE19487.427Vulpes_vulpes
ENSAPLG00000008797CSDE110082.647ENSXETG00000021448csde110082.647Xenopus_tropicalis
ENSAPLG00000008797CSDE19287.273ENSXCOG00000000035csde18587.273Xiphophorus_couchianus
ENSAPLG00000008797CSDE19879.735ENSXMAG00000009080csde19879.735Xiphophorus_maculatus

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